Brassica rapa (field mustard): 103842721
Help
Entry
103842721 CDS
T03449
Name
(RefSeq) cyclin-dependent kinase D-3
KO
K02202
cyclin-dependent kinase 7 [EC:
2.7.11.22
2.7.11.23
]
Organism
brp
Brassica rapa (field mustard)
Pathway
brp03022
Basal transcription factors
brp03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
brp00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
103842721
09124 Replication and repair
03420 Nucleotide excision repair
103842721
09180 Brite Hierarchies
09181 Protein families: metabolism
01001 Protein kinases [BR:
brp01001
]
103842721
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
brp03021
]
103842721
03019 Messenger RNA biogenesis [BR:
brp03019
]
103842721
03400 DNA repair and recombination proteins [BR:
brp03400
]
103842721
Enzymes [BR:
brp01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.11 Protein-serine/threonine kinases
2.7.11.22 cyclin-dependent kinase
103842721
2.7.11.23 [RNA-polymerase]-subunit kinase
103842721
Protein kinases [BR:
brp01001
]
Serine/threonine kinases: CMGC group
CDK family
103842721
Transcription machinery [BR:
brp03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIH
103842721
Messenger RNA biogenesis [BR:
brp03019
]
Eukaryotic type
mRNA processing factors
5' end processing
Capping factors
103842721
DNA repair and recombination proteins [BR:
brp03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TFIIH complex
103842721
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Pkinase
PK_Tyr_Ser-Thr
Kinase-like
ABC1
Haspin_kinase
Seadorna_VP7
DUF6193
Motif
Other DBs
NCBI-GeneID:
103842721
NCBI-ProteinID:
XP_009117629
UniProt:
A0A397Y675
LinkDB
All DBs
Position
A09:40888099..40890743
Genome browser
AA seq
389 aa
AA seq
DB search
MEQPKKVADRYLKQEVLGQGTYGVVFKATDTKTGETVAIKKIRLGKHKEGVNITALREIK
MLKELKHPHIILLIDAFPHKENLHLVFEFMETDLEGVIRDSNVFLSPADIKSYLLMTLKG
LAYCHEKWVLHRDMKPNNLLIGPDGQLKLADFGLARIFGTPDRKFTHQVFARWYRAPELL
FGAKQYGATVDVWAAGCVFAELLLRRPFLQGNSDIDQLSKIFAAFGTPKADQWPDMKSLP
DYVEYQFVPAPSLRSLFPAVSEDALDLLSKMFTYDPKARISVKQALEHRYFTSAPSPTDP
AKLPKPLRKQETKASYGKHEAIKVVSPPRKIRRVIPERGWVDGMKSHVDKDQQAPMSLDF
TVLAERPPNRPTITSADRSHLKRKLDLDF
NT seq
1170 nt
NT seq
+upstream
nt +downstream
nt
atggagcagccaaagaaagtagctgataggtatctcaagcaagaggttctcgggcaaggt
acttacggcgtcgtcttcaaggccactgatactaagacaggagaaactgtagcaatcaag
aagataaggcttggtaaacacaaggaaggtgtaaacattacggctctcagggaaatcaaa
atgctcaaagagctaaagcatcctcatatcattctcttgatcgatgcgtttcctcacaaa
gagaacttgcaccttgtgtttgagttcatggagactgacctcgaaggagtcattcgcgat
tcaaacgtgttcctctcacctgccgacatcaaatcttacctcctaatgacacttaaagga
cttgcttattgccacgagaaatgggttttgcacagggatatgaagccaaataacttgttg
ataggacctgatggacagctgaaacttgcagattttggattagcacgtatatttggtact
cctgatcgtaagtttacccatcaggtgtttgctagatggtacagagcaccagaacttttg
tttggtgcaaaacaatatggtgctacagttgatgtttgggctgctggctgcgtatttgct
gaacttctgctacgcagaccatttcttcaggggaacagtgatatcgatcaattaagcaaa
atatttgctgcctttgggacaccaaaagcggatcaatggccagacatgaaaagccttcct
gattacgtagagtatcaatttgtcccagcaccttctctacgttctttattcccagcagtt
agtgaagatgctctcgatttattgtccaagatgtttacatatgacccaaaggctagaatt
tctgttaagcaggctctagaacacaggtactttacttctgcaccttctcctactgaccct
gctaagctcccaaagccacttcggaagcaggaaactaaagcctcttacggtaaacatgag
gctatcaaagtggtatcaccaccacgtaagattagaagagtaatacctgagcgtgggtgg
gttgatggtatgaagtctcacgttgacaaggatcaacaagcacccatgtcattagatttt
accgtcctcgctgagcggcctcctaaccgaccaaccatcaccagtgccgatagatctcat
ctgaagaggaagcttgatctcgatttctaa
DBGET
integrated database retrieval system
