Brassica rapa (field mustard): 103862033
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Entry
103862033 CDS
T03449
Name
(RefSeq) DDB1- and CUL4-associated factor homolog 1
KO
K11789
DDB1- and CUL4-associated factor 1 [EC:
2.7.11.1
]
Organism
brp
Brassica rapa (field mustard)
Brite
KEGG Orthology (KO) [BR:
brp00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01001 Protein kinases [BR:
brp01001
]
103862033
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
brp04121
]
103862033
Enzymes [BR:
brp01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.11 Protein-serine/threonine kinases
2.7.11.1 non-specific serine/threonine protein kinase
103862033
Protein kinases [BR:
brp01001
]
Serine/threonine kinases: Other
Other
103862033
Ubiquitin system [BR:
brp04121
]
Ubiquitin ligases (E3)
Multi subunit Ring-finger type E3
Cul4 complex
Target recognizing subunit (DCAF)
103862033
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LisH
WD40
ANAPC4_WD40
Motif
Other DBs
NCBI-GeneID:
103862033
NCBI-ProteinID:
XP_009137994
LinkDB
All DBs
Position
A03:29610008..29617511
Genome browser
AA seq
1900 aa
AA seq
DB search
MDEQGDDAEVRNPTAVTAETENSIGGPDHEEGQQEEDDEVTAIAAEVAAEQKEEDELIEK
AQKLMDSITAGANNPNPTILHALSHLLESKESLFVKVSEFYSNDRSNHISGNLCNLIREN
DEFFELISSNFLTEDTYSTAVKAASVRLLVNCSLTSMYPYVFDDAVMDKFKNWVLDESVK
FPGEHSGSKEASDAEMLKTYSTGLLAISLTSRGQLVEDVLASGLSAKLMHYLRVRVIGDS
STSRRDALHATEAKHVSLKGKEEGRGRVRRVVDTVEGDHVLDADSGREMGQSEGEFEIDG
NVSAVVDCKLKPGDDNTGRDDPSRQRMNRSKSRGRGKVNEGATDTDVLLTSPRSIRLGVR
DRDLPKNSDVRNAEDVTLCLGKMKSGIVGIERDENDECFQGCWVGTKNITDLVKRAIGAA
ETEARAAHAPDDAAKAAGDAAAELVKTAALEEFKSSGSEEAAVSAAVRAATTVIDAAEVS
RNPTCVISDQTAELNSVETDAIADVGEVSLPDIKSLAQLQEKYCIQCLEILGEYVEVLGP
VLHEKGVDVCITLLERTSQLEDSFALSPLLPDVMKLICALAAHRKFAAMFVDRGGLQKLL
TVPRVTETFYGLSSCLYTIGSLQGIMERVCALPSDLIHQLVKLAIELLDCSQDQARKNAA
LFFAAAFVFRAILDAFDAHNSLQKLLAILKDAASVRTGANSDRSAPEVMTSSEKQMAFHT
CFALRQYFRAHLLLLVDSIRPSRSGRGGVRNVSNVRAAYKPLDISNEAVDAVFHQLHKDR
KLGPTFVRTQWPAVNNFLASSGHVTMLELCQTPPVDRYLHDLLQHAFGVLHIVTSIPDGR
KAIVSATLSNNRAGIAVVLDAANISNSIVDPEIIQPALNVLINLVCPPPSLSNKPPLAQN
HQPVSGQATARPSTDAAADTQSTGNAPPTPVAPASSGLVGDRRIFLGAGTGSAGLAAKLE
QVYRLAREAVRGNDGIKILLKLLQPRIYVNPPAAPDCLRALACRVLLGLARDDTIAQILT
KLEVGKSLSELIRDAGGQSSGTDQVRWQAELAQVALELIGILTNSGHANTLTASDATTPT
LRRIERAAIAAATPITYDSKELLLLIHEHLQASGLGETASALLKETQLSPLPSLAPPSSV
AFSATQEMSAPVVQEQWPSGRANGGFFTSKPKVCAHDEDPNSRCNAAISAKKKHLASSTH
ETSSTPVAQQQWPSGRASGGFFPSKLKVNTHEEDPSLIGNAAPSAKKKQLTFSPSFSLQP
RNQTFPQDAHPQSTQRIDSSSHSDPACADTSDTAAKLVLKSDIDADSQFKTPTFPRKRKL
SELKDTDVSVSGKRINLGELGPPSPACRTTASFRRSSTIADASGFQTPASALDVNQSGSS
RLGLMTPASQLRLPSDPQPSNTERLTLDSLVVQYLKHQHRQCLAPITTVPPVSLLHPHVC
PEPKRLLEAPLNITGRLGTREVQSFYSGVHGSRRDRQFVFSRFKSWRSYRDENALFTCIS
LLGGTNHLAVGSHAGEIKIFDASSCSLLESFSGHQAPVTLVQPYVSGDTQLLLSSSSSDV
QLWDASYITNGSKHSLDGCKAAKFSNSGRYFAALSCEGSKDVLLYNVETCTISHKYTDTS
TSSRSSPYSLVHFSPCDTLILWNGHLWDRRVPDEVSRFDQFTDYGGGGFHPSRNEVIINS
EVWDLRKMRLLRSVPSLDQTAITFNSRGDVIYAMLRRNIEDVMSAVHTRRSKHPLFAAFR
TLDAVNYSDIATIPVDRCLLDFATEPTDSFLGLITMEDQDDMLSSARLYEIGRRKPTDDD
SDPDDDGETEDEDEDDEDDGDDLDRILGLAGDDSGSGDDDISSDDNEDNSASDFDDDDGG
MLFEGGDFLEIMSDGDDEDSGDDEDDNVDGEEDFLDNTQS
NT seq
5703 nt
NT seq
+upstream
nt +downstream
nt
atggacgaacaaggggacgatgccgaggtccgtaatccaacggctgttacggcggagacg
gaaaattcaatcggcggacctgaccatgaagaaggacaacaggaggaggacgacgaagta
acggctattgcggcggaggttgcggcggaacagaaggaagaagacgagcttatagagaag
gcgcagaagctcatggatagcatcaccgccggtgctaataaccctaatcctactatcctc
cacgctcttagccatctcctcgagtccaaagagtctctgtttgtaaaggtgagtgagttc
tactccaatgatcgcagtaatcatatcagtggcaatctgtgtaatctcatcagagagaat
gatgagttttttgaactgatttcctcaaattttcttactgaggatacttactcaaccgcg
gttaaggcagcctccgtaaggctgctagtgaactgttcgcttacttccatgtatccttat
gttttcgacgatgctgttatggataaatttaaaaactgggtcttggatgagtcggtcaag
tttcctggtgaacactctggcagcaaagaggcctcagatgctgagatgttgaagacttat
tccacaggacttctcgctatctctctgacgagtcgtggtcaattagttgaagacgtcttg
gcatcaggactatctgctaagcttatgcattatcttcgagtacgtgttattggagactcg
agcacaagccgtagagatgcccttcatgcaactgaggctaagcatgtttccttaaaagga
aaagaagaaggtcgaggtagggtgcggagggttgtggatacagttgaaggtgaccatgtt
cttgacgcagactccggtagagagatgggtcagtctgaaggagaattcgaaatcgatggc
aatgtttcagctgttgttgactgtaaactgaaacctggagatgacaataccggaagagat
gacccttcaagacagagaatgaaccgatcaaaatccagggggagaggaaaggtgaacgaa
ggtgctaccgatacagacgttctcttgacatctcctagatcaattcgtctgggtgtcaga
gatagggatctaccaaaaaattcagatgtcagaaatgcagaagatgtgaccttatgtctg
gggaaaatgaaatctggtattgtagggattgaaagagatgagaatgatgagtgctttcaa
ggttgctgggtaggaaccaaaaatataactgatctagtaaagagagcaattggagctgct
gaaacggaagctagagctgcccatgctcctgatgacgcagctaaagcagctggcgatgct
gcagcagagcttgttaaaactgctgctttggaggaattcaagtcatctggcagtgaagaa
gctgccgtgtctgctgctgttcgagcagctactacagtcatagatgccgctgaggtttca
agaaatcccacttgtgttatatctgatcagactgcggaattgaatagcgtggaaacagac
gcaattgccgatgttggagaagtttcacttccagatatcaaatcgttggctcagttacaa
gaaaaatattgtatccagtgccttgaaatactgggtgaatatgtcgaggttctcgggcct
gtccttcacgaaaaaggtgttgatgtatgcattacgctactggaacgtacatcccaactt
gaagatagttttgcactgtcccctttgttacctgacgtaatgaagttaatttgcgctttg
gctgcacaccggaagtttgctgcaatgtttgttgaccgtggtggcttgcaaaagttactt
actgtaccaagggttactgagaccttttatggtctctcatcttgcttatacaccataggc
tctcttcagggtataatggagcgtgtctgtgcacttccatcggatctcatacatcaactg
gttaaattagctatagaacttctagactgctcccaggatcaagccaggaaaaatgcagcc
ttattcttcgctgctgcttttgtctttagagccattttagatgcatttgatgctcataat
agcttgcagaaactccttgcgattcttaaagatgcagcctcagttagaactggtgctaat
tctgaccgatcagcccctgaagtcatgacatcgtcagagaaacagatggcttttcacacc
tgttttgctttgcgccagtattttagagctcatctacttttgcttgtggattccattcgt
cctagcagaagtggccgaggtggtgttcgaaatgtttctaatgtaagggcagcctataag
ccccttgacatcagcaatgaagctgtagatgccgtattccatcagttacataaggatagg
aagttgggtccgacctttgtcagaacccagtggcctgccgtcaataactttttggcgtcc
tctggacatgttaccatgttagaactatgtcagactccaccagtagaccgttatctccat
gatctgcttcagcatgcttttggtgttcttcacatagttacatcaatacctgatggccgc
aaagcaattgtgagtgccacactgagcaacaatcgtgcgggcattgccgtcgttctggat
gcagcaaatatttccaacagcatagtggacccagagatcatacagcctgcattaaatgtc
ctaatcaatctggtctgccctccaccatcattaagtaataaaccgcctcttgcacaaaat
catcaacctgtttccggccaagctactgcccgtccttcaaccgatgctgctgcagatact
cagtccactggtaatgctccgccaactcctgttgcaccagcgtcttcagggttggtcggt
gatagaagaattttcttaggagcaggaactggttctgctggccttgctgctaagttggag
caggtctatcgtctagcacgtgaagctgttcgtgggaatgatggtataaaaattctccta
aaacttcttcagccgagaatttatgtgaacccccctgctgccccagattgtctacgagcg
ttggcttgcagggtacttcttggtcttgctagagatgatacaattgcacaaatactgact
aaacttgaggttggtaagagtttgtcagaactaattcgggatgcaggtggtcagtcaagt
ggaacagatcaggtcaggtggcaggctgaacttgctcaggtggcccttgagctaataggg
atattgacaaattcagggcatgcgaatacactaacagccagtgatgctactactccaacc
ttgaggcgcattgaaagagccgccattgcagcagcaacacctataacatatgattctaag
gagcttttgctccttatccatgagcacctccaggcatcaggtcttggtgaaactgcttca
gcactgttgaaagagactcagttgagtcctctaccttccctggctcccccttcttctgtt
gcattttccgctacacaagagatgtctgcgccggtggttcaggaacagtggccctctggc
cgtgctaacggtggatttttcaccagcaaacccaaagtctgtgcacatgacgaagatcct
aattctagatgtaatgcggctatatctgccaaaaagaaacatctcgcttcctcgacacat
gagacgtcctccacgccagtagcacagcaacagtggccctctggccgtgctagcggtggt
tttttccccagtaaactcaaagtcaatactcatgaggaagatcctagcttgataggtaat
gcagctccatccgcaaagaagaaacagttgactttctcacccagctttagtttgcagcca
cggaatcaaactttcccccaggacgctcaccctcagtctactcagagaatagacagtagt
tcacattcagatcctgcttgtgctgatacatcagacactgctgcaaaattagttttgaag
agcgacattgatgccgattctcaatttaagaccccgacttttcccagaaaacggaaactg
tcggaacttaaagacacagatgtttcagtttcaggtaaaagaatcaatttgggcgagcta
ggaccgccatctccagcttgtcgaaccacagcttcctttcgtaggagttcaaccattgcg
gatgcttcaggtttccaaacaccagcttcagctttggatgtcaaccaatctgggagctcc
aggctaggcctgatgacacctgcttctcagctaaggcttccaagcgatccccagccttca
aatacggaacggttaacactagactcccttgttgttcaatatttgaaacaccaacacaga
cagtgtctggctccgatcacaactgttccccctgtgtctctcctacatccgcatgtctgt
cctgaacctaaacgtttacttgaagctccactaaatatcactggccgtcttggaacccgc
gaggttcaaagtttttacagtggagtccatgggagtcgcagggaccgtcagttcgttttc
agcagattcaaatcttggagatcttaccgagatgagaatgctctctttacatgcatctca
ctacttggaggtactaatcatttagcagtcggtagtcatgctggagaaatcaaaatattc
gacgctagcagctgtagcttgcttgagagtttctcaggccaccaggctccggtaacactt
gttcagccatatgtctctggcgatactcagttgttgctttcttctagttccagtgatgtg
cagttgtgggacgcttcttatataactaatgggtctaagcactccttggatgggtgcaag
gctgcaaagttcagcaactctgggcgatattttgcagcgctctcatgtgaaggatcaaaa
gatgttcttctgtataacgtagagacctgcactatttcccataaatacactgacacatca
acttcttctcggagtagtccatattctcttgtacacttcagcccttgcgatacactaata
ttgtggaatggtcatctgtgggatcgccgtgttccagatgaggtcagtcggtttgatcaa
tttactgattatggcggcggtggttttcatccttctcgaaacgaggtgatcataaactct
gaggtctgggatttgaggaaaatgaggctacttcgaagtgtaccatcactggaccagaca
gctattacgttcaactccaggggtgatgttatctacgcaatgctgaggagaaacatcgag
gacgtgatgtctgctgtccacacgcgccgttcgaagcatcccttgtttgctgctttccgc
actcttgatgcggtcaactattcagacattgccactataccagtggaccgatgtcttctc
gactttgccacagaaccaacagattctttccttgggctgatcacaatggaagatcaagac
gatatgttatcctcagcgaggttgtatgagattggcaggcggaaaccaacagatgatgac
tctgatccagatgatgatggtgagacagaggatgaagatgaagacgatgaggacgatgga
gatgacctggaccggattctgggactagctggagacgatagcggcagtggagatgatgac
attagcagcgatgacaatgaagataatagtgcaagcgattttgatgatgatgatgggggt
atgctctttgaaggtggtgactttttggagattatgagtgatggtgatgatgaagatagt
ggtgatgatgaagatgacaatgttgatggcgaagaggattttctggacaacactcaatct
taa
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integrated database retrieval system
