Brassica rapa (field mustard): 103864404
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Entry
103864404 CDS
T03449
Name
(RefSeq) DNA (cytosine-5)-methyltransferase 1
KO
K00558
DNA (cytosine-5)-methyltransferase 1 [EC:
2.1.1.37
]
Organism
brp
Brassica rapa (field mustard)
Pathway
brp00270
Cysteine and methionine metabolism
brp01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
brp00001
]
09100 Metabolism
09105 Amino acid metabolism
00270 Cysteine and methionine metabolism
103864404
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
brp03000
]
103864404
03032 DNA replication proteins [BR:
brp03032
]
103864404
03036 Chromosome and associated proteins [BR:
brp03036
]
103864404
09183 Protein families: signaling and cellular processes
02048 Prokaryotic defense system [BR:
brp02048
]
103864404
Enzymes [BR:
brp01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.37 DNA (cytosine-5-)-methyltransferase
103864404
Transcription factors [BR:
brp03000
]
Eukaryotic type
Zinc finger
CXXC CpG-binding proteins
103864404
DNA replication proteins [BR:
brp03032
]
Eukaryotic type
DNA Replication Termination Factors
DNA methylation enzymes
103864404
Chromosome and associated proteins [BR:
brp03036
]
Eukaryotic type
Heterochromatin formation proteins
Other heterochromatin formation proteins
103864404
Prokaryotic defense system [BR:
brp02048
]
Restriction and modification system (R-M system)
Type II R-M system
DNA methyltransferases
103864404
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNMT1-RFD
DNA_methylase
BAH
DHODB_Fe-S_bind
Motif
Other DBs
NCBI-GeneID:
103864404
NCBI-ProteinID:
XP_018513688
UniProt:
M4EN21
LinkDB
All DBs
Position
A04:complement(12876552..12882687)
Genome browser
AA seq
1520 aa
AA seq
DB search
MVRNGSKAAKQKKRSLPESKETDHDDDLSTRKTRPKRAAACTNFKEKSIRISEKSATVAA
KHHQTVDDEIVALHLTASSPQSGGGHEPHQTRRLTDFVLHDTDGVSQAVEMVEHVDMFIT
GVILPTGECSDKERAKGVRCEGFGRVDNWSISGYEDGSPVVWVTTSLADYECVKPATTYK
KVYDYFFQKAYASVEVYKKVANSDLMSLDELLVAVARAMSLETKCFSSDYLAIKNFVISQ
GEFIYNQLAGLDDTAKKDDARFVEIPVLVALRDASSSSILEYDAGQPSNGVLRIDGAAER
KAMSSDQHMVDEDEKFARLVQDEEYMKSMQRPRKSSSSASVSKNGYIMTTEDEIANDYPL
PAHYKNSQVETDELLLYHDDDYEVDIDDLPRKMLQNWALYDIDSRLISLELLPMKTCADI
DVTIFGSGVMADDQGIWIDLDDPATSMPSEEHGGIPIFLSQIKEWMIEYGVSTVSVSIRT
DAAWYRLGKPSKQYAPWFEPILKTARVAVGVFALLEEQTRMAKLSFEDVVRRVCEFESNH
KAYISSDRAAVDRYVVGHGQIILQMFSEFPNKEIRRCAFITGLANKRAEKHNTRWTIKKK
KILLKVNLNPRAGVAPVSKRKAMQATTTRLINRIWGEFYSIYSPEEPLQAVGAEEEAEED
EEEDEEENEDDDAEETEPEAAEVEEAHTLPKKIVGKCGKMETRWDGESVGRTSAGEPLYR
QALLEGERVAVGGAVIAEVSGSQAIYFVEYMFESSDHCKMLHGRLLQRGSETVLENAANE
RELFLTNKCMTVQFKDVKGTVCFEIRTRPWGHQFRKEDAVADKLDRARAEERKAKDLPTE
YFCKSLYSPERGGFFSLPLSDMGCASGSCTSCRLREDEVQRKKIKLNASKTGFSSYGIDY
CADDFVYVYPDCIDGSKKANGKFKPGRNIGLRAFVVCQLVEIIVPKKSRKGSFEVNVRRF
YRPEDVSERKAYASDIREVYYSEDTFVVQPEALKGKCEVRKKKDMPSCSEFPISENIFFC
EQIYDPSKGSVKQLPLNIKPKYSTVKDDALLRKKKGKGVESETDSGIVVKPNELPKEMRL
ATLDIFAGCGGLSQGLEQAGVSATKWAIEYEGPAGEAFRKNHPETTVIVDNCNVTLRAIM
EKCGDQDECISTTEANELAAKLDENQKRTLPLPGQVDFINGGPPCQGFSGMNRFSQSPWS
KIQCQMVLAFLSFVDYFRPRYFLLENVRNFVSYSKGQMFKLTLASLLEMGYQVRFGVLEA
GAYGVSQSRKRAFIWAAAPEDVLPEWPEPMHVFNVSQLNISLSKGLRYAAVRSTQHGAPF
RPITVRDTIGDLPPVENGESNIDKEYETDPVSWFQKEIRGNKNVPTDHLSQTMNEHNLIR
CKRIPKRSGADWRDLPDEKVTLSTGLVVDLIPGCLAAKPGKKKQWKGLFGRLDWEGNFPT
CVTKPGPMGMVGKCFHPDQDRIVTVRECARSQGFPDSYEFEGDIAHKHRQIGNAVPPPLA
FALGRKLKEAVQLNNFAKSN
NT seq
4563 nt
NT seq
+upstream
nt +downstream
nt
atggtgagaaacggaagcaaggctgcgaagcagaagaagagatctcttccagagagcaaa
gagaccgaccacgacgatgatctctccacgaggaagacgaggccaaagcgagccgcagca
tgcacaaacttcaaggagaaatccatccgtatctccgagaaatccgccaccgttgcagca
aagcaccatcagactgtggatgacgagattgtagctctacacttgacagcttcttctccc
cagagcggcggcggccacgagcctcaccaaaccaggagactgaccgatttcgttttacat
gataccgacggagtttcgcaggctgtggagatggtggaacatgtcgacatgttcatcaca
ggtgtgatcttgcctactggtgaatgctctgacaaggagagagcaaaaggtgtgaggtgc
gaagggttcggacgcgttgataactggagtatctccgggtatgaagatggctccccggtg
gtatgggtgacgacctctctggcagattacgaatgcgttaagcctgctaccacctacaag
aaggtgtatgattatttcttccagaaggcgtatgcctcggtagaggtttacaagaaagtg
gccaactctgacttgatgagtcttgatgagttgcttgtggcggttgcgagggctatgagc
ctcgagactaagtgcttctctagcgattacttggccatcaaaaatttcgttatatcccaa
ggagagttcatatataaccagctcgccggtttagatgatacggccaagaaagatgatgca
agattcgttgagattcctgtactcgttgctctcagggatgctagtagtagtagcatactt
gaatatgatgctggtcaaccttctaatggggttctgaggattgatggagctgcggagagg
aaggccatgtcatctgatcaacacatggttgacgaggatgaaaaatttgctcgacttgta
caagacgaagagtatatgaaatccatgcaaaggccgaggaaaagcagcagctcagcttct
gtttcaaagaacggatacataatgaccactgaagatgagatcgccaatgattatcctctc
ccagctcattacaagaactcccaagtagaaacagacgagcttttgttataccatgacgac
gactacgaggttgacatcgatgacctgcctcgtaagatgcttcagaactgggcgctttac
gacatcgattcacggttgatatccctggagcttctcccgatgaagacttgtgctgatatc
gatgtgaccatctttggatccggtgtgatggcagatgatcaagggatctggattgatcta
gatgatcctgctacctctatgccgtcagaggaacatggtgggatacctatattcctcagt
caaataaaggaatggatgattgagtatggggtgtcaacggtctcggtttcgatacgaaca
gatgcggcctggtatcgacttgggaaaccgtcaaagcagtacgccccttggttcgaacct
attctgaaaacagcgagggttgcggtcggcgtttttgctctgctggaggagcaaactaga
atggctaagctttcgtttgaagatgtcgtaagaagagtgtgtgagttcgagagtaaccat
aaggcttacatttcgtctgaccgcgcggctgttgacagatacgtggttggccacgggcag
ataatcttgcagatgttttcggagtttcctaacaaggagatcagaaggtgtgcgtttatt
actgggctcgcgaataaaagggcggagaagcacaacacaagatggaccatcaagaagaag
aagattttgctgaaagtgaatttgaacccaagggcgggtgtggcacctgtctccaagagg
aaggctatgcaagcgacaacaacgcgtctgatcaacagaatctggggggagttttactcc
atttactctccagaggagccgttgcaggcagttggtgcggaggaagaggctgaagaggat
gaggaggaggacgaggaggaaaatgaagatgacgacgcagaggaaactgaacctgaagct
gctgaggtcgaagaggctcatacgcttccaaagaaaattgtaggcaaatgtggaaaaatg
gaaacaagatgggatggtgagagtgtaggaagaacttctgctggtgagcctctctatcga
caagccctcctcgaaggggaaagagtggctgtaggtggtgctgtcatcgcggaagtcagc
ggaagtcaggccatctactttgtggagtacatgtttgaaagttcggatcactgcaaaatg
ctacatggaagacttttacaaagagggtccgagactgttctggagaatgctgctaacgag
agggaactctttttgacgaacaaatgcatgactgtacagttcaaggacgtaaaaggaaca
gtctgtttcgagattcgaacgaggccatggggacatcagtttagaaaagaggacgccgtt
gcggataagcttgaccgggcaagagctgaagaacgaaaggcgaaagacttgcctacggag
tacttctgcaagagtttgtattcgcctgagagaggaggcttctttagtcttccgctcagt
gatatgggctgtgcttctggatcatgcacttcatgcagattaagagaggatgaagtgcag
aggaaaaagatcaaactaaacgcttcaaagactggtttttcctcctatgggattgactac
tgcgctgatgattttgtctacgtatacccagactgtatcgatggatcgaagaaggctaat
gggaagtttaagccagggcggaacatcggtttaagagcctttgttgtgtgccaacttgtt
gagatcattgtcccaaagaaatctagaaagggttcctttgaggttaatgtccgaaggttt
tataggcctgaagatgtatctgaacgaaaggcctatgcttcagatatccgagaggtgtat
tacagcgaggacacctttgttgtccaaccagaggctctaaagggaaaatgtgaagtaagg
aagaagaaagatatgccctcttgtagtgagtttccaatatcggagaacattttcttttgt
gaacaaatatacgacccatctaaaggttccgtcaagcagttgcccctcaatatcaaaccg
aagtactctacagttaaggacgacgcacttttaagaaagaaaaaggggaagggagtagag
agtgaaactgattctggtattgttgtcaagcctaatgagttacctaaagagatgcgtctg
gcgaccttggatatttttgctggttgtggtggcctgtctcaaggactggaacaagcaggt
gtatctgcaacgaagtgggcgatcgagtatgaagggccagctggggaggcttttagaaaa
aaccatcccgaaacaacagttattgttgataactgcaatgtgactcttagggctataatg
gagaaatgtggagatcaagatgagtgtatctctactacagaagctaatgaactcgctgct
aaacttgatgagaaccagaagcgtactctgccactgcctggtcaagtggatttcatcaac
ggaggccctccatgtcagggattctctggtatgaaccggttcagccaaagcccatggagt
aaaattcagtgtcaaatggtattagcattcttgtcttttgttgattatttccggccaaga
tactttctcctggagaacgtgaggaactttgtctcatatagtaaagggcagatgtttaaa
ctcactctggcttctcttctcgaaatgggttaccaggtgagatttggggtgttggaggca
ggtgcatatggggtttctcaatctcgcaaaagagcttttatatgggcagctgcaccggaa
gacgttcttcccgaatggcctgagccgatgcatgtctttaatgtttcacagctgaatatc
tcactatccaaaggtttacgctatgctgctgttcgtagtactcaacatggagcacctttc
cgtccaatcaccgtgagagacacaatcggcgatcttccacctgtagagaatggagaatcc
aatatagacaaagagtatgaaactgatccagtctcgtggttccaaaaggagataagagga
aacaagaatgttcccactgatcaccttagccaaacgatgaacgaacacaacctcatccga
tgtaaaagaatcccgaagaggtcaggtgctgattggcgtgacctcccagatgaaaaggtg
acgttatctactggactggtggtggatttgattccagggtgtctagcagcgaaacctggt
aaaaaaaagcagtggaaaggactgtttgggaggttagattgggaaggcaactttccaact
tgcgtcactaaacctggtcccatgggtatggttggtaagtgcttccatcctgaccaagac
aggatcgtcactgtccgtgaatgcgcccgatctcaggggtttccggatagctatgagttc
gaaggggacatagcacacaagcataggcagattgggaacgcagtgcctccccctttggcc
tttgctcttggtcgcaagctcaaagaagcagtacagctcaacaacttcgccaaaagtaat
tag
DBGET
integrated database retrieval system
