Brassica rapa (field mustard): 103865567
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Entry
103865567 CDS
T03449
Name
(RefSeq) ABC transporter B family member 1
KO
K05658
ATP-binding cassette, subfamily B (MDR/TAP), member 1 [EC:
7.6.2.2
]
Organism
brp
Brassica rapa (field mustard)
Pathway
brp02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
brp00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
103865567
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
brp02000
]
103865567
04147 Exosome [BR:
brp04147
]
103865567
04090 CD molecules [BR:
brp04090
]
103865567
Enzymes [BR:
brp01000
]
7. Translocases
7.6 Catalysing the translocation of other compounds
7.6.2 Linked to the hydrolysis of a nucleoside triphosphate
7.6.2.2 ABC-type xenobiotic transporter
103865567
Transporters [BR:
brp02000
]
ABC transporters, eukaryotic type
ABCB (MDR/TAP) subfamily
ABCB1, 4, 5 subgroups
103865567
Exosome [BR:
brp04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
103865567
CD molecules [BR:
brp04090
]
Proteins
103865567
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_membrane
ABC_tran
SMC_N
Zeta_toxin
AAA_16
ABC_ATPase
AAA_22
AAA_29
RsgA_GTPase
AAA
AAA_5
nSTAND1
AAA_30
SbcC_Walker_B
AAA_15
APS_kinase
AAA_25
DUF87
Rad17
ECH_2
Motif
Other DBs
NCBI-GeneID:
103865567
NCBI-ProteinID:
XP_009141619
UniProt:
M4DL35
LinkDB
All DBs
Position
A04:18688927..18694947
Genome browser
AA seq
1338 aa
AA seq
DB search
MSQESVQTQEEEEIKSVEEQWRLSEMQALEFLPEASSDNNNSRNSETELREHPPEMENNG
APPPPPPPEPKKPEIHGVAFKELFRFADGLDYALMAIGSVGAFVHGCSLPLFLRFFADLV
NSFGSNANDVDKMMQEVLKYALYFLVVGAAIWASSWAEISCWMWTGERQTTKMRIKYLEA
ALNQDIQFFDTEVRTSDVVSAINTDAVMVQDAISEKLGNFIHYMATFASGFIVGFTAVWQ
LALVTLAVVPLIAVIGGIHTTTLSKLSNKSQESLSQAGNIVEQTVVQIRVVMAFVGETRA
SQAYSSALKTAQRLGYKTGLAKGMGLGATYFVVFCCYALLLWYGGYLVRHRLTNGGLAIS
TMFAVMIGGLALGQSAPSMAAFAKAKVAAAKIFRIIDHRPTIERNSESGVELDSVTGLVE
LRNVDFSYPSRPDVKILNDFTLSVPAGKTIALVGSSGSGKSTVVSLIERFYDPASGQVLL
DGHDLKTLKLKWLRQQIGLVSQEPALFATSIRENILLGRPDADQVEIEEAARVANAHSFI
IKLPDGFDTQVGERGLQLSGGQKQRIAIARAMLKNPAILLLDEATSALDSESEKLVQEAL
DRFMIGRTTLIIAHRLSTIRKADLVAVLQQGSVSEIGTHDELFAKGENGVYSKLIKMQEA
AHETAMNNARKSSARQSSARNSVSSPIMTRNSSYGRSPYSRRLSDFSTTDFTLSIDASSY
PNYRHDKLPFKDQANSFVRLAKMNSPEWKYALLGSIGSVVCGSLSAFFAYVLSAVLSIYY
NPNHEYMIKQIGKYCYLLIGLSSTALIFNTLQHSFWDIVGENLTKRVREKMFTAVLKNEM
AWFDQEENESARISARLALDANNVRSAIGDRISVIVQNTALMLVACTAGFVLQWRLALVL
VAVFPVVVAATVLQKMFMTGFSGDLEAAHAKGTQLAGEAIANVRTVAAFNSEAKIVRLYT
ANLEPPLKRCFWKGQIAGIGYGIAQFCLYASYALGLWYASWLVKHGISDFSKTIRVFMVL
MVSANGAAETLTLAPDFIKGGQAMRSVFELLDRKTEIEPDDPDTTPVPDRLRGEVELKHI
DFSYPSRPDIQVFRDLTLRARAGKTLALVGPSGCGKSSVISLVQRFYEPSSGRVMIDGKD
IRKYNLKALRKHIAIVPQEPCLFGTTIQENIAYGHECATEAEIIQAATLASAHKFISALP
DGYKTYVGERGVQLSGGQKQRIAIARALVRKAEIMLLDEATSALDAESERSVQEALDQAC
SGRTSIVVAHRLSTIRNAHTIAVIDDGKVAEQGSHSQLLKNYSDGIYARMIQLQRFTHGQ
VIGMTSGGSSRVKEGDDA
NT seq
4017 nt
NT seq
+upstream
nt +downstream
nt
atgtcccaagaatctgttcagacacaagaagaagaagaaataaagtcagtggaggaacaa
tggcgtttgtccgaaatgcaagcacttgagtttctccctgaagcttcctccgacaacaac
aactcaagaaactcagaaacagagctccgggaacatccaccggaaatggaaaataacggt
gctcctcctcctcctcctcctccggagcccaagaaacctgaaattcatggagttgcattc
aaagagcttttcagattcgcagacgggttagattacgcgctgatggcaattggctccgtt
ggcgctttcgtccacggctgctctttacctctgttcctcagattcttcgccgatctcgtt
aactcctttggctctaacgctaacgacgtcgacaagatgatgcaagaagtcctcaagtat
gctctttacttcctcgtcgttggtgctgcgatctgggcttcctcctgggcagagatttcg
tgctggatgtggactggagagagacaaacgacgaagatgaggattaagtacttagaagca
gctttaaaccaagacattcagttcttcgacactgaggttcgaacttccgatgttgtctcc
gccatcaacaccgacgcagttatggtccaagacgcaattagcgagaagttagggaacttc
atccattacatggcgacttttgcgtccggattcatcgtgggattcacggcggtgtggcag
ctagctttagtgacactcgcggtggttccgttgatagctgtgatcggaggaatccacacc
acaactctctctaagctctctaacaagagccaagagtctctttctcaagctggtaacatc
gtcgaacaaacagtggtgcaaatcagagtagttatggcgtttgtcggagagacaagagcc
tctcaagcttactcatcagctttgaagacagctcagagacttggttacaaaacaggttta
gccaaaggaatgggacttggcgctacttacttcgtcgtcttctgttgctacgctctcttg
ctatggtacggtggctatctcgttcgccatcgtttgaccaacggtggtctcgctatatcc
accatgttcgccgtcatgatcggtggcttggcattgggacaatcagcaccgagcatggct
gcgtttgcgaaagctaaagttgctgctgcgaagatctttagaatcattgatcacaggcct
acgatagagcgtaacagcgagtccggcgtggagctagactctgtcacgggcctagtcgag
cttagaaacgttgacttttcgtacccgtcgaggccagatgttaagatccttaacgacttt
accctctctgtccccgccgggaagactatagctttggttgggagcagcggttcgggcaaa
agcacggtcgtttcgcttatcgagaggttttacgacccggcatcagggcaagttttacta
gatgggcatgacttgaagactctgaaacttaaatggttaaggcaacagatagggcttgtg
agccaagaaccagcattattcgccacttctatcagagagaatatactcttagggcgtccc
gacgcagatcaagttgagatagaggaggcagctcgcgtggccaacgctcattcctttatt
atcaaactacctgatggcttcgacacacaggtaggggagagaggactacagctatcaggt
gggcagaaacaaagaatagccatagcaagagccatgttaaagaaccctgcgatacttcta
ctagatgaggcgacgagtgcgttagattctgagtcagagaagctagtgcaagaagctttg
gatcgtttcatgatcggaaggacgactctcatcattgctcatcgtctttccaccatacgc
aaagccgaccttgttgctgtccttcagcaaggaagtgtctctgagattggaacgcacgac
gagctttttgccaagggggagaatggtgtctactctaagcttatcaaaatgcaagaggca
gctcacgagaccgctatgaacaatgcaagaaagagtagtgcaagacagtcgagtgcaaga
aactctgtgagctcaccaataatgacccggaactcttcatatggaagatcaccgtactcg
cggagactctcagacttctcaactactgacttcaccctctccattgacgcctcttcatac
cctaactatcgacacgataagctacccttcaaggaccaagccaactccttcgtgcgccta
gctaaaatgaactcaccagagtggaaatacgctctcctaggctctataggctctgtcgtc
tgcggctcgctcagcgcgtttttcgcatacgtcctaagcgcggtccttagcatctactac
aacccgaaccacgagtacatgatcaagcagattggtaagtactgttacctcttgatcggt
ctatcctcaacagcgcttatcttcaacacgctccagcattctttctgggacattgtcggt
gagaacctgaccaagagggtccgtgagaagatgtttacggcggtgcttaagaacgagatg
gcttggtttgatcaagaggagaatgagagtgcaagaatctcagcgaggttggctcttgat
gctaataacgtgaggtcagctataggagatagaatctcggtgattgtgcagaacacagct
ttgatgcttgttgcttgtactgctggttttgttctgcaatggaggctcgcgttggtcttg
gtcgctgtcttccctgtagttgttgctgcaactgtcttacagaaaatgttcatgactggc
ttctccggagacttggaagcagcgcatgccaaggggacacagctcgctggtgaagccata
gctaacgtcaggacagtcgctgccttcaactcagaggcaaagattgttcgtctctacacc
gcaaacctcgagccacctttgaaacgctgcttctggaaaggacagatcgctggaattggc
tacggtattgcacagttctgtctctacgcatcttacgctctagggctatggtacgcatcg
tggcttgtgaaacacggcatctctgacttctccaaaaccataagagtcttcatggtcctt
atggtctcagccaacggtgcagcagagacactcactttagctcctgatttcatcaaaggt
ggtcaggctatgcggtcggttttcgagcttcttgaccgaaaaaccgaaatcgaaccggat
gatcctgataccaccccggttccagaccggttacgcggcgaggtggagctcaaacacatt
gacttctcttacccttcgagaccagacattcaagtcttccgtgacctaaccctccgtgct
agagccggcaagactctagctcttgtcggccctagcgggtgcggtaaaagctcggtcatc
tcccttgtacaaagattctacgagccgtcctcagggcgggtcatgatcgacggcaaagac
ataagaaagtacaatctcaaagccctaaggaaacacatagccatagtccctcaagagccg
tgcttattcggaacaactattcaagaaaacatagcgtacggacacgagtgcgccaccgag
gcagagatcatacaagccgcaacgttagccagcgcgcacaagttcatatccgcgttgccc
gatggatacaagacgtacgtaggcgagagaggcgttcagctctcgggagggcagaagcag
aggattgctatcgcgcgtgccttggtgaggaaggcagagatcatgctgcttgatgaggct
actagtgctcttgatgctgagtccgagaggtcggtgcaagaggcgttggaccaggcttgc
tctggtagaacgtcgattgttgtggctcataggttgtctacgataaggaatgctcacacg
atagctgtgatcgatgatgggaaagtagcggagcaagggtcgcattctcagctgcttaag
aactattctgatggaatctacgcgaggatgattcagttgcagaggtttacgcatggtcag
gtcattggtatgacgtcaggggggagttctagggttaaggaaggtgatgatgcttag
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integrated database retrieval system
