Brassica rapa (field mustard): 103871796
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Entry
103871796 CDS
T03449
Name
(RefSeq) biotin carboxylase, chloroplastic
KO
K01961
acetyl-CoA carboxylase, biotin carboxylase subunit [EC:
6.4.1.2
6.3.4.14
]
Organism
brp
Brassica rapa (field mustard)
Pathway
brp00061
Fatty acid biosynthesis
brp00620
Pyruvate metabolism
brp00640
Propanoate metabolism
brp01100
Metabolic pathways
brp01110
Biosynthesis of secondary metabolites
brp01200
Carbon metabolism
brp01212
Fatty acid metabolism
Module
brp_M00082
Fatty acid biosynthesis, initiation
Brite
KEGG Orthology (KO) [BR:
brp00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00620 Pyruvate metabolism
103871796
00640 Propanoate metabolism
103871796
09103 Lipid metabolism
00061 Fatty acid biosynthesis
103871796
Enzymes [BR:
brp01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.4 Other carbon-nitrogen ligases
6.3.4.14 biotin carboxylase
103871796
6.4 Forming carbon-carbon bonds
6.4.1 Ligases that form carbon-carbon bonds (only sub-subclass identified to date)
6.4.1.2 acetyl-CoA carboxylase
103871796
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Gene cluster
GFIT
Motif
Pfam:
CPSase_L_D2
Biotin_carb_N
Biotin_carb_C
ATP-grasp
Dala_Dala_lig_C
RimK
ATP-grasp_5
Motif
Other DBs
NCBI-GeneID:
103871796
NCBI-ProteinID:
XP_009148347
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Position
A06:3947203..3951553
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AA seq
578 aa
AA seq
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MGGSKSLTITKHGRSDSITCPLVNIETFLLRDKKDLRLFIQQMDASMITNCKSTASLPSL
FLGRSGGSIRSSQCNVMMGKAITFPSQKTQTLKVSRKNVNRRCGGGALGATCSTGDKILV
ANRGEIAVRVIRTAHEMGIPCVAVYSTIDKDALHVKLADEAVCIGEAPSNQSYLVIPNVL
SAAISRGCTMLHPGYGFLSENALFVEMCREHRINFIGPNPDSIRVMGDKSTARETMKNAG
VPTVPGSDGLLKSTEEGVKLANEIGFPVMIKATAGGGGRGMRLANEPSEFVKLLQAAKSE
AAAAFGNDGVYLEKYVQNPRHIEFQILADKFGNVVHFGERDCSIQRRNQKLLEEAPSPAL
TPELRKAMGDAAVAAAASIGYVGVGTVEFLLDERGSFYFMEMNTRIQVEHPVTEMIYSVD
LIEEQIRVAMGEKLRYTQDEIVLRGHSIECRINAEDPFKGFRPGPGRITSYLPSGGPFVR
MDSHVYPDYVVPPSYDSLLGKLIVWAPTRERAIERMKRALNDTIITGVPTTIEYHKLILE
VEDFKNGKVDTAFIPKHEEELAEPHEIVLVKDLTNAAA
NT seq
1737 nt
NT seq
+upstream
nt +downstream
nt
atgggtgggtccaaatctctaaccattacaaaacacgggcgatccgattcaatcacttgt
cccctcgttaacatcgaaacatttctcctcagagacaagaaggatctgcgtctctttatc
cagcaaatggacgcctcaatgattactaattgcaaatccactgcctcccttccctctttg
ttcctggggaggtcgggaggtagcattagaagttcccagtgtaatgtcatgatggggaaa
gccattaccttcccgagccaaaagactcagactttgaaggttagccggaagaacgtgaat
aggaggtgtggtggtggtgcgcttggtgctacttgcagtactggggataagattcttgtg
gctaacagaggtgaaattgctgtccgtgtgatccgaactgctcatgaaatggggattcct
tgtgttgctgtttactcaaccattgacaaggatgcattgcatgtcaaattggctgatgag
gctgtttgtattggtgaagctcctagcaaccagtcgtatttggtgataccgaatgttctg
tcagctgcaattagccgaggatgcacaatgcttcatcctggatatggattcctttcagag
aacgctctttttgttgagatgtgcagagagcacaggatcaactttattggaccaaatcct
gatagcatccgtgtcatgggtgacaaatcaactgccagggagacgatgaagaatgctggt
gtcccaactgtaccagggagtgatggactattaaagagcacagaagaaggagtcaagctc
gccaatgagattgggtttcctgtgatgatcaaggcaacagctggtggtggtggacgtgga
atgcgtctcgctaatgaaccgtcagagtttgtgaaactgctgcaggcagcaaagagtgag
gccgcggctgcttttggaaatgatggagtttatctggagaagtacgtccaaaatccccgc
catattgagttccagattcttgcagataaatttggaaatgttgttcacttcggcgagcgt
gactgcagcatccagagacggaaccaaaagttgctggaagaagcaccttcccctgcactg
acccctgagttgcgaaaagccatgggtgatgcagctgttgcagcagcagcgtccattggg
tacgttggtgttggtaccgtggagttccttttggatgagagaggttccttctatttcatg
gaaatgaatactagaatccaggtggagcatcctgtgacagagatgatttactccgttgat
ttgattgaagaacagattcgtgttgctatgggagagaaactgcgttatacacaggatgag
attgtgcttagaggacactctattgaatgtcgtatcaatgcagaggacccatttaaagga
ttcagacctggacccggaagaataacatcatatctgccatctggaggtccctttgtcaga
atggatagtcatgtgtatcccgactatgttgttcctccaagctatgactctcttcttgga
aagcttattgtatgggctccaacgagggaaagggcaattgagcggatgaaacgtgcactt
aatgacactattattacaggggttcccaccaccattgagtaccacaaacttatccttgaa
gttgaggatttcaagaacggaaaagttgacactgcattcatccccaagcatgaagaggaa
ttagcagagcctcatgaaattgtgctagtgaaagatttgacaaatgcagctgcttag
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