Brassica rapa (field mustard): 103872148
Help
Entry
103872148 CDS
T03449
Name
(RefSeq) beta-galactosidase 2
KO
K12309
beta-galactosidase [EC:
3.2.1.23
]
Organism
brp
Brassica rapa (field mustard)
Pathway
brp00052
Galactose metabolism
brp00511
Other glycan degradation
brp00531
Glycosaminoglycan degradation
brp00600
Sphingolipid metabolism
brp00604
Glycosphingolipid biosynthesis - ganglio series
brp01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
brp00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00052 Galactose metabolism
103872148
09103 Lipid metabolism
00600 Sphingolipid metabolism
103872148
09107 Glycan biosynthesis and metabolism
00531 Glycosaminoglycan degradation
103872148
00604 Glycosphingolipid biosynthesis - ganglio series
103872148
00511 Other glycan degradation
103872148
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
brp04147
]
103872148
Enzymes [BR:
brp01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.23 beta-galactosidase
103872148
Exosome [BR:
brp04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
103872148
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Glyco_hydro_35
BetaGal_gal-bd
GHD
Glyco_hydro_42
BetaGal_ABD2
Motif
Other DBs
NCBI-GeneID:
103872148
NCBI-ProteinID:
XP_009148743
LinkDB
All DBs
Position
A04:complement(4526440..4532503)
Genome browser
AA seq
727 aa
AA seq
DB search
MVMNFRDKAWIFLAIMCFSLLICSTKALVSYDHKALIINGQKRILLSGSIHYPRSTPEMW
PDLINKAKEGGLDVIQTYVFWNGHEPSPGQYYFGDRYDLVRFIKLVQQAGLYVSLRIGPY
VCAEWNFGGIPVWLKYVPGMVFRTDNGPFKTAMQKFTKKIVDIMKEEKLFETQGGPIILS
QIENEYGPMEWEIGSAGKAYTKWTAAMALGLSTGVPWVMCKQDDAPYPIINTCNGFYCEG
FKPNSVDQPKMWTENWTGWFTEFGGAIPNRPVEDLAFSVARFIQNGGSFMNYYMYHGGTN
FDRTSGEFITTSYDYDAPLDEYGLLREPKYSHLKELHKIIKLCEPALVSVDPTINSLGNK
QEAHVFKSKTSCAAFLSNYDTTYPAKVMFRGFPYDLPPWSISILPDCKTEYHNTAKIRSP
SILMKMVPTSTRLSWESYNEAIPSSGDYGTFARDGLLEQISMTRDKTDYFWYLTDITISS
NEGFLKTGEDPLLTICSAGHALHVFVNGQLAGTSYGALSSPKLTFSQRIKLREGVNKLAI
LNTAVGLPNAGVHYETWNTGVLGPATLNGVNSGAWDMSKWKWSYKIGTKGEAMSLHTTTG
SSSVEWTEGSFVAVKQPLTWYKSSFNAPVGNEPIALDMNTMGKGQVWVNGRNIGRHWPAY
TAHGNCGRCNYAGIYSEKKCLSNCGQSSQRWYHVPRSWLKPSGNLLVVFEEWGGDPSGIS
VVKRTDK
NT seq
2184 nt
NT seq
+upstream
nt +downstream
nt
atggttatgaattttagggataaagcttggatttttctggcgattatgtgtttttcattg
ttgatttgctcaactaaagcattggtctcttatgatcataaagctttaatcatcaatgga
cagaaaaggatccttctctctggttccatccactacccaagaagcacccctgagatgtgg
cctgatctgataaacaaggccaaagaaggtggtttagatgttatacaaacttatgttttc
tggaacggacatgaaccttctcctggacaatattattttggggatcggtatgatctggtt
aggttcatcaagctggtgcaacaagccggtctatatgttagcctgagaattggtccatat
gtttgtgccgagtggaattttgggggaattcctgtttggctcaaatatgtccctggtatg
gttttcaggactgataatggacctttcaagactgcaatgcaaaaattcacaaagaagatt
gtggatataatgaaagaagaaaagttgtttgaaactcaaggaggacccatcattctctcg
cagatagagaatgagtatggaccaatggaatgggagataggatcagcaggaaaggcatac
acaaaatggacagctgcaatggcgttgggtttgtccacaggtgtcccatgggttatgtgc
aagcaagatgatgctccttaccctattataaacacatgcaacgggttttattgtgagggt
ttcaaaccaaactcggtcgatcagcccaagatgtggacagagaactggactggttggttc
acggaatttggaggtgcgataccaaacagaccagtcgaagaccttgcgttctccgtggct
cgctttatacagaacggtggttcatttatgaattactatatgtaccatggagggacgaac
tttgatagaacatcgggtgagtttatcaccacaagctatgactatgatgctcctcttgat
gaatatggattactgagagaacccaagtatagtcatttgaaagagttgcataaaatcatc
aaactatgtgaacctgcgttggtctctgttgatcccaccattaattcgctcggcaataag
caagaagctcatgtgttcaagtccaagacttcttgtgctgcgtttctctcaaactacgac
acaacttatccagcaaaagttatgtttagggggttcccatatgatttgcccccttggtct
atcagtatcttacctgactgcaaaaccgagtatcacaacactgcaaagattcgttcaccg
agcatacttatgaagatggttcctactagcacgcgattatcatgggaatcatacaacgaa
gcaatcccttcttcaggtgactatggtacgtttgctcgagatggtttgttggaacaaata
agcatgaccagagacaaaacagactatttctggtatcttacagacattacaattagttct
aatgaggggttcttgaaaactggcgaagatccacttcttaccatttgttcagctggtcat
gctcttcatgtattcgttaatggtcagctcgcaggaactagttatggagcattgagcagc
cccaagctcacatttagtcaaaggatcaaattgcgcgaaggcgtcaacaaacttgctatc
ctaaatacggcagtgggtcttccgaacgcaggtgtgcactatgagacttggaatactgga
gttctaggtccagccacactgaatggagttaactctggagcatgggacatgtctaagtgg
aaatggtcctataagatcggtaccaaaggtgaagctatgagccttcataccacaaccggg
agttcctctgtggaatggacagaaggatcattcgtggccgtgaagcaaccattgacctgg
tacaagtcttcttttaatgcgccggtaggcaatgaaccaattgcattggacatgaacaca
atgggaaaaggacaagtttgggtaaatggacgcaacataggacgtcattggcctgcctac
acggctcatggtaactgcggacgctgcaactatgctgggatttacagcgagaagaaatgt
ctcagtaattgtggccaatcttctcaaagatggtaccatgtgcctcgttcatggcttaag
ccatctgggaaccttctagttgtgtttgaggaatggggtggtgatccaagtgggatttct
gttgttaaaagaacagacaaatga
DBGET
integrated database retrieval system
