Brassica rapa (field mustard): 103873516
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Entry
103873516 CDS
T03449
Symbol
LCB2
Name
(RefSeq) long chain base biosynthesis protein 2b
KO
K00654
serine palmitoyltransferase [EC:
2.3.1.50
]
Organism
brp
Brassica rapa (field mustard)
Pathway
brp00600
Sphingolipid metabolism
brp01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
brp00001
]
09100 Metabolism
09103 Lipid metabolism
00600 Sphingolipid metabolism
103873516 (LCB2)
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
brp01007
]
103873516 (LCB2)
Enzymes [BR:
brp01000
]
2. Transferases
2.3 Acyltransferases
2.3.1 Transferring groups other than aminoacyl groups
2.3.1.50 serine C-palmitoyltransferase
103873516 (LCB2)
Amino acid related enzymes [BR:
brp01007
]
Aminotransferase (transaminase)
Class II
103873516 (LCB2)
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Aminotran_1_2
Beta_elim_lyase
DegT_DnrJ_EryC1
Aminotran_5
OKR_DC_1
Cys_Met_Meta_PP
Motif
Other DBs
NCBI-GeneID:
103873516
NCBI-ProteinID:
XP_009150176
UniProt:
A0A397Z623
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Position
A06:17227430..17230435
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AA seq
489 aa
AA seq
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MITIPYLTAVSTYFSYGLLFAFGQLRDYSRLIFDWCSTNNLHGYAPICLAHEDFYIRRLY
HRIQDCFNRPISSAPDSWVDVIERYSNDNNKTLKRTTKSTRCLNLGSYNYLGFGSFDEYC
TPRVIESLKKFSASTCSSRVDAGTTSVHAELEECVAKYVGKPAAIVTGMGFATNSAIIPV
LIGKGGLIISDSLNHTSIVNGARGSGATIRVFQHNTPAHLERVLKEQIAEGQPRTHRPWK
KIIVVVEGIYSMEGEICQLPEIVSVCKKYKAYVYLDEAHSIGAIGKTGRGVCELLGVDTA
DVDIMMGTFTKSFGSCGGYIAGSKELIQYLKYHCPAHLYATSISTPSAQQIISAIKVILG
EDGSNRGAQKLARIRENSNFFRAELQKMGFEVLGDNDSPVMPIMLYNPAKIPAFSRECLR
ENVAVVVVGFPATPLLLARARICISASHSREDLIKALKVISKAGDLTGIKYFPAAPKKQE
EEKDRIKLD
NT seq
1470 nt
NT seq
+upstream
nt +downstream
nt
atgattacgatcccatacctgacggccgtatcgacatacttcagctacggcttgctcttc
gcgttcgggcagcttcgagattactcgcgccttatcttcgattggtgctccaccaacaat
ctccacggatacgcccccatctgcttggctcacgaggatttctacatccgacgattgtat
caccgtattcaggattgttttaatcggcccatctcaagtgctcctgattcttgggttgat
gttatcgagaggtactctaatgacaacaacaagaccctcaagcgaacaacaaagagcaca
aggtgcctcaatttgggctcttacaactatcttgggttcggttctttcgatgagtattgc
actcctcgcgttattgagtccttgaagaagttttcagctagtacatgcagctctcgcgtt
gacgcagggaccacatctgtgcatgcagaacttgaagaatgtgttgccaagtatgtgggg
aaacctgctgctattgtcactggtatgggcttcgcaacaaactccgctatcattcctgtc
ttgattggaaagggagggttgataataagcgattctttgaaccatacttcaattgtaaac
ggtgctcgaggttcaggagccactatccgcgttttccaacacaacacacctgctcatttg
gaaagagtattgaaagaacaaatcgctgagggacaacctaggacacacagaccctggaag
aaaattattgttgttgttgagggtatttacagcatggaaggggagatttgtcaactgccc
gagattgtctcagtttgcaagaagtataaggcttatgtttacttggatgaagctcacagc
attggagcaattggaaaaacaggcaggggtgtttgcgaacttctcggagttgacacagct
gatgtggacattatgatggggacttttaccaaatctttcggatcttgtggtggctatatt
gccggatccaaggagctcatccaatatttgaagtaccattgcccggctcacctttacgca
acatcaatctcaactccttcagcgcaacaaatcatatcagccataaaagttatccttgga
gaggacggttcaaacagaggtgcgcaaaagttagcaaggataagggagaacagcaacttt
ttcagggctgagttgcagaagatgggatttgaggtccttggagacaatgattccccagtc
atgccaataatgctttacaatccagcaaaaatcccagccttctcaagggaatgcttgcga
gaaaacgtcgcagttgtggttgttggtttcccagctacgcctctattgctagccagggct
cgtatttgcatatccgcatctcactcaagagaagatcttatcaaagctctaaaggttata
agcaaagcaggtgaccttaccggaatcaaatattttccggcagcaccaaagaagcaagaa
gaagagaaagatagaatcaaattggattaa
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