KEGG   Brassica rapa (field mustard): 103873550
Entry
103873550         CDS       T03449                                 
Name
(RefSeq) serine/threonine-protein kinase ATM
  KO
K04728  serine-protein kinase ATM [EC:2.7.11.1]
Organism
brp  Brassica rapa (field mustard)
Pathway
brp03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:brp00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03440 Homologous recombination
    103873550
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01001 Protein kinases [BR:brp01001]
    103873550
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:brp03032]
    103873550
   03036 Chromosome and associated proteins [BR:brp03036]
    103873550
   03400 DNA repair and recombination proteins [BR:brp03400]
    103873550
Enzymes [BR:brp01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.11  Protein-serine/threonine kinases
    2.7.11.1  non-specific serine/threonine protein kinase
     103873550
Protein kinases [BR:brp01001]
 Serine/threonine kinases: Other
  PIKK family [OT]
   103873550
DNA replication proteins [BR:brp03032]
 Eukaryotic type
  DNA Replication Termination Factors
   Other termination factors
    103873550
Chromosome and associated proteins [BR:brp03036]
 Eukaryotic type
  Meiosis-specific proteins
   DSB formation-related proteins
    103873550
DNA repair and recombination proteins [BR:brp03400]
 Eukaryotic type
  Check point factors
   Other check point factors
    103873550
SSDB
Motif
Pfam: PI3_PI4_kinase FAT FATC TAN
Other DBs
NCBI-GeneID: 103873550
NCBI-ProteinID: XP_009150205
LinkDB
Position
A06:16814520..16841686
AA seq 3022 aa
MITSRDVHEVVWKLSSDKAKTREDGVKLLNTWLEGDMSINFCSFLSHNTAKLKLDQIPNA
ETWPFLVKNLLQCVSMEVSGSKRRIPKPTFAKALRVVIQRAEETKFPGVLSPLLSMAKTI
FTHVHDILSNTPSFHSEYGIILRHLLEIKEYRFQMRKRTYSNLVMLYLERAEAGFWEKNS
GQHSQKEEAFRCILTLQSLLENPPGDFSDDIRKEIVNGLIHIFSSARDEEKLSRKLIECV
NSFLLKDGPNIGSLSLEIHNAVQQFVFRCWLTTHDKNLKEILAFYGRLQLNLTRGSSESS
SLLEQLLNVVTRELDLGSSSSSASWGDSTKDGTLSSYQNSLVELAAHVLYRAVVNTTRSS
LSEKRARRQHITLRLVEALTEGKWLWCAAFGCLIRTHCTRINKDLLIYWFEAICTNFQRL
VEDASMRRSYDGLLWTLRSLQELSSGLLLPTATIDISKSTVSSSELDRGWQLIWSSLIHG
LATFSSMTVIVDAVLVLLGSIISNNHINVGILPQEVWDHQLFRHIPSEPALYFIACYFSR
MGCQGNLQDDLHLRRNLLRAVCGPLSLKGPLALNERMVRLLPAAALALCAGFTTTLPLPK
EHLPTPPSWDACEVVNDVKMDDAEQERKFGLFECSVEVLTRVYSNSIKISSYRVPDGVQL
PLVLRDPLLNDMEIYFLSIIPEDSEKGPLSDIFMGCSLLCHFMHGSYTTRKGKGSTSFFL
KACQYLLESLDYAVEAVLKSLYDFQRLGPLGFGSDFNEKSSIIVSLRSLTSSPVFSNRGD
QNLLATSYDTVFHSLEDLLRSFAKVYGEYTEHSWNTKSDTVTSKSLALDPPEVGRIVDMD
LDLDVDTKEIDLITAGGKAVAGGPVSTGNWKLGMISLISCFSPVLQLPTWDVLYSIMEKE
CDPKVLENILYHLCQLSCLTSMPKVYDLVIFLDDMLNKQVKNKRNCLNIVTALHVLLQNF
LSSGMDSSGLKPNSELSHLKEGESCQIFVQLGAMVNKVSECGLLGWFGRVRLISCICNFV
LLNPQIGQTMIERLLLMLNDSDYRVRFVLARQIGLLFQTWDGHEALFQDICSSFGIILVT
SSKEKLVTARDVLAAGPQPRPKMETVIITLMHLAYHSENIELQAVFMMCAVSAIDPCQRE
LIIAALDNLSAQLHYPSRFKYLEELLGPILFFWIACGVSLAALVETSQLFILNAEPKYFI
HFCSHWLLPALLLHEDNTNLDWVAKMASKPVSVLVKENFVPIFSIGMGLHCSKTSECEKG
ALVLQNSILYVGQITETERDKLIKRNMVSIVSFVLSRASSSPEPPVPAFSRDTISRAIQT
IVDGFLETADYPKNAAVIDNINVFRPDRVFMFITEIHYKMSAACHHRHTRHHLAALEELT
IILGHRALVPSSLNYIFNLVGQFISSPSLQDQCCSIASCLLDSFRSNPAKEIVSVLGDQL
QFLVSKLVTCCIDAEANSKVSGSKSSQLVNLLHKLIANSESSLHEDIRDLEPLPDMEIFR
VIRESHIRRCEGYSPRNHLLKCARRSCYLPPRFLSWSLQALHHKLIATEASQGESNLETG
DSFWHSDDEIVNAVWTLVRVSASDEADSMRLLASDFLSRVGIGDPHTVVFHLPGELGSMN
DLQFVSHNKGSKVSSFTENGVSDETLISLLKILKKYLLDDSVKIIDVTSQTLRGILSTER
GQQALSSIDSCERSLIEVHGRGVNLDTVEKILLDSEKQYKAENFSLEKAEVWSTDNKNFD
GWICQLVYCMISLCEDVPIRLCQNIAMLKAEISELLFPSVIVSLAGRVGTDINLHELITS
QVKEHIFVDSNKLTKSKQVMLNTLNELRMCYVLERSTFSGQTKREKNTKHSNYSSRSSSS
AAKIRDVETANGMAASITANWDKVYWLSIDYLVAARSAVVCGAYLTAAMYVEYWCEEKFG
SLSLGDPDFSYHDMLPDHVEILVSAITRINEADSLYGVIHSNKLSAQITTFEHEGNWSRA
LEYYDLQARSQKMVVPGSLPENQGVEHFQPTTSAQHSVFGEGEVQRQPFKGLIRSLQQTG
CMHVLDLYCRGLTSREGSFQYDPEFIELQYEAAWRAGKWDFSLLYPQTHSPPMQHVKNNN
YHENLHGCLRALHEGDCNGFHGKLKDAKKELVLSISRASEESTEFIYSAVVKLQILYHLG
LVWDLRWTTSSHESMHGYPVKQMACADPVTPTMEQFSWLNKDWISITTQTQFHMNLLEPL
VAFRRVLLQILGCEQCTMQHLLQSASLLRKGSKFSHAAASLHEFKFLCAKSDGGQPVPDW
LGRIEEAKILHAQGRHEVAISLANYILQNYQLKEEASDIYRVIGKWLAETRSSNSRTILD
KYLKPAVSLAKNPSSEISKRLVDRQSQTWFHLAHYADALFKNYEERLSSSEWQAAMRLRK
HKTKELELLIKRYKSSKKGEQSDYSLKIQELQKQLTMDKEEAEKLQVDRDNFLKLALEGY
QRCLQIGDKYDVRVVFRQVSMWFNLTSQKDVIDNMLSTISEVQSYKFVPLVYQIASRLGS
SRDESGSNSFQSALVSLLRKMAIDHPYHTILQLLALANGDRIKDNQRSRNSFVVDIDKKV
AAEHLLQDVSQHHGPMIRQMKQLVDIYIKLAELETRREDTNKRVALPREIRSVKQLELVP
VVTATIPVDRSCQYNEGSFPSFRGLSDSVTVMNGINAPKVVECFGSDGRKYKQLAKSGND
DLRQDAVMEQFFGLVNTFLHNNRDTWKRRLAVRTYKVVPFTPSAGVLEWVDGTIPLGDYL
IGSSRAGGAHGRYGIGNWNYSKCREHMSSAKDKRKAFMDVCTNFRPVMHYFFLEKFLHPA
DWFVKRLAYTRSVAASSMVGYIVGLGDRHAMNILIDQATAEVIHIDLGVAFEQGLMLKTP
ERVPFRLTRDIIDGMGITGVEGVFRRCCEETLSVMRTNKEALLTIVEVFIHDPLYKWALS
PLKALQRQKETEDYDGVNLEGLQEEFEGNKDAARALMRVKQKLDGYEGGEMRSIHGQAQQ
LIQDAIDTDRLSHMFPGWGAWM
NT seq 9069 nt   +upstreamnt  +downstreamnt
atgattacttcgagggatgtccatgaggtcgtctggaagctctcgtcggataaagccaag
actcgtgaagatggagtcaagttattgaacacgtggctcgaaggagatatgtcaattaac
ttctgtagctttctttcgcataacacagccaagcttaagttggaccaaattccaaatgct
gaaacgtggccctttttggttaaaaatctccttcaatgtgtatcaatggaggtgtcaggt
agtaagagacggatacccaaacccacttttgccaaggcgcttcgagttgttattcagaga
gcggaagaaaccaagtttcctggtgtactctctcctttgctatctatggccaaaaccatc
tttacacatgtacatgatattttgagcaatacacctagctttcattcagagtatgggatc
atactccgccatcttttggaaattaaggaataccgtttccaaatgaggaagcgtacatat
tccaatttggtgatgttatacctagaaagggcggaagcagggttttgggagaaaaacagt
ggtcaacatagccagaaggaggaggcgtttcgttgtattcttacgcttcagtcactttta
gagaaccccccaggagatttctctgatgacattcgaaaagaaattgtgaatggtctcatt
cacatcttctcttctgcaagagatgaagaaaagctctcacgcaagcttattgaatgtgta
aattcgttcttgctgaaggatggtcctaatataggctccttgtcattggaaattcataat
gcggtccaacagtttgtgttccgttgctggttaacaacccatgataagaaccttaaggag
atacttgctttttatggaaggctacagctaaatttgacaagaggatctagtgaatctagt
tctctgttggaacaacttttgaacgtggttactcgtgaactggatcttggtagttcatca
agttctgcatcatggggtgattcaaccaaggatgggacattgagcagctatcagaatagc
ttggttgagttggctgcacatgtgctctaccgggcagttgtcaatactactagatcatca
ctgtcagagaaacgagctcgaaggcaacatattacattgcgtcttgtggaggcacttact
gaaggaaaatggctgtggtgtgctgcttttggttgtctgattcggactcattgtactcgc
atcaacaaggatctccttatttactggtttgaagccatctgtacaaactttcaaagactt
gtggaggatgctagtatgagacgttcttatgatggtctattatggactttgaggagtttg
caagagctatcttctggtttgttacttccaactgctactatcgacatatcaaagtcaact
gtttcctcaagtgagctagatcgtggttggcaattgatctggagttctttgatccacgga
ctagcaacattcagcagcatgaccgtaattgttgatgctgtcttggtgctccttggatca
attatttcaaataaccacataaacgtggggattctacctcaagaagtgtgggatcaccaa
ttattcagacacataccctctgagccggccttgtacttcattgcatgttacttttcacgt
atgggttgccagggaaacctgcaagatgatctacatctacgacgcaatctccttagagca
gtttgtggcccccttagcttgaagggtccattggcactgaatgagcgaatggttcgcctt
ctaccagcagctgctttagccctatgtgctggtttcacaacgacacttccattacctaag
gaacatctcccaacaccacctagttgggatgcctgtgaagtggtgaatgatgtgaagatg
gatgatgctgaacaagaaagaaaatttggactgtttgaatgctctgtagaggttctaaca
agagtttactcgaattctatcaagatctctagttaccgagttcctgatggagtacaacta
cctctagtactaagagatccattgcttaatgacatggaaatctattttcttagcattatc
ccagaggacagtgagaaaggaccactttctgacatatttatgggatgttctctgctgtgt
cattttatgcatggttcttatacgacgaggaagggtaagggaagcacttcgttcttctta
aaagcatgccagtatttgttagaaagcctggactacgctgttgaagcagttttaaagagc
ctctatgattttcaaaggcttggacccctggggtttggctcagattttaatgagaaaagt
tctataatagtttcgttgaggtctcttactagttctcctgtcttcagcaacagaggagac
caaaatcttcttgccactagttatgatactgtatttcactccttagaggaccttttacgg
tcgtttgctaaagtttacggagaatatactgagcactcatggaatactaaatctgacact
gttacttcgaaatcgttagcacttgatcccccagaagttggcaggattgtggatatggat
ttggatctagatgtagacactaaagagatagatcttataactgccggtggaaaagctgtt
gccggtgggcctgtttctacggggaactggaagttgggcatgatatcgcttatctcatgt
ttttctccggtacttcagttgcctacatgggatgttttatatagtattatggagaaggaa
tgtgatcctaaggttttggaaaatatactctatcatctatgccagctttcatgcttgact
tctatgccgaaggtttatgatttggttattttcttggatgacatgctcaacaaacaagta
aagaacaagcgtaactgtctcaatatagtcactgccttacatgttttactgcaaaatttt
ttatcctcggggatggattcttctggactcaaaccaaactcggaattgtctcatctgaaa
gaaggagagagttgtcagatctttgtccaacttggcgcaatggtgaataaagtttctgaa
tgtggtctcttgggctggtttgggcgtgtgaggcttatcagctgtatatgtaattttgtc
ttgcttaatcctcagattggtcagacaatgattgagcgacttttgctaatgctaaatgac
tctgattatcgggtgcggtttgtcctggcaagacaaattgggcttttattccagacatgg
gatggtcatgaggcattattccaagatatttgctctagctttggtattatactggtaacc
tcctcaaaggaaaagcttgtcactgcaagagatgttttggctgctggtcctcagcctcgc
ccaaaaatggagactgtcatcattactcttatgcaccttgcatatcacagtgagaacata
gagttgcaagctgtttttatgatgtgcgctgtttcagctatagatccttgtcagagggaa
ttaatcattgctgcacttgacaatctatcagcacaactccattacccatctaggttcaag
tacctggaagaactcttgggcccgatcctctttttctggattgcatgtggtgtcagttta
gctgctcttgttgagacaagtcagctgttcattctaaatgctgaaccgaaatatttcatc
cacttttgttcccactggctacttccagctcttctgctgcatgaagataatactaacctt
gattgggtagctaagatggctagcaaaccggtgtctgtgttggtcaaagaaaattttgtg
cctatcttttcgataggtatgggattgcactgtagtaaaacatcagaatgtgaaaaaggt
gcattggtgcttcaaaattcgatattatatgtgggtcagatcaccgagactgagagggat
aagctcattaaacggaatatggtgtctattgttagttttgttttatcacgtgcttcctct
tcaccagaaccccccgttcctgctttttctcgtgacaccatttcacgagcaattcaaaca
attgtggatggttttctggaaaccgctgattatcctaagaatgcggcggtcattgataat
atcaatgtttttcgcccagatagggtgttcatgttcatcacagaaatacactataaaatg
tcagctgcatgccatcaccggcatacgcgtcatcacctggccgctctagaagagcttact
attattcttggtcatagagctttggttccaagttccttaaattatatattcaatcttgtt
ggacaatttatctcctctccctcattacaagaccagtgttgtagtatagcttcctgttta
ctggattcgttcagaagcaatccggccaaagaaattgtcagtgtactaggtgaccaactc
cagtttttggtttcaaaactagttacatgctgcatcgatgctgaagcgaactccaaagtt
tctggttctaagtcatctcaacttgtaaatttgctccacaagctaattgctaattcagaa
tcttctctccatgaagatataagagatttagaaccattgcccgatatggaaatttttcgt
gtcattcgcgaatcacacatcaggagatgcgaaggttactcaccaaggaatcatctgttg
aagtgtgccagaagatcatgttatcttccaccaagattcctttcctggagtctccaagca
ctgcaccacaagctcatagctactgaagcttctcaaggagagtcaaatctcgaaactgga
gatagcttttggcattctgatgatgaaattgtaaatgctgtttggactcttgtccgcgtg
tctgcttcagatgaggcagatagtatgagattgttggcgtcggattttctttccagggtt
ggtattggggacccccacaccgttgttttccatcttcctggggagttgggatccatgaat
gatcttcaatttgttagccataataaaggatcaaaagttagttcttttactgagaatggc
gtatccgatgaaacccttatttcgctgttaaagattctgaagaagtatcttttggatgac
tctgtgaagatcattgacgtaacgtctcaaacccttcggggaattctttctactgaaagg
gggcagcaagcattatcttctatcgattcgtgtgagagatctttgattgaggtacatggc
aggggtgttaaccttgacactgttgaaaagatcttactggatagcgaaaagcagtacaaa
gctgaaaacttttcactggagaaggctgaggtgtggtccacagataataaaaacttcgat
ggatggatttgtcagcttgtgtactgtatgatctcgttatgtgaggatgtcccaataagg
ttatgccagaatatagcaatgctgaaagctgaaatttctgagcttttgtttccaagtgtt
attgttagtcttgcaggaagggtagggactgatatcaatttacacgaactaattacatca
caggtgaaagagcacatcttcgtcgattcaaacaagctaacaaagtcgaagcaggtcatg
ttaaacaccctgaatgaactgcggatgtgttatgtccttgaaagatcaactttttctggg
caaactaaaagagaaaagaatactaagcattctaactacagttctagatctagctccagc
gctgctaagattagagatgtggaaacagctaatggtatggcagcgtccataactgcaaat
tgggacaaggtatattggctttccattgattatcttgttgctgccagatcagcagtagtt
tgtggtgcatatttgaccgccgccatgtatgttgagtactggtgtgaggagaaatttggc
agtctaagcctcggagatcctgatttttcttatcatgatatgttaccggatcacgttgag
atacttgtgtctgcaataacaagaataaatgaggctgacagcttgtatggggttatacat
tccaacaagttgtctgctcaaataaccacatttgagcatgagggaaactggagtagagca
cttgagtactatgacttgcaagcacgttcacagaaaatggtggtgcctggtagccttcct
gaaaaccaaggggtggaacattttcagccaacaactagtgcacaacattctgtttttggc
gaaggggaggtccagagacaacctttcaaagggctcattaggtctttgcagcagacaggc
tgtatgcatgttctcgatctgtattgccggggcttgacttcccgagaaggctcctttcag
tatgatccagagtttatcgaattgcagtatgaggctgcatggcgtgcaggaaaatgggat
ttttctttactctatccacaaacgcactctccacctatgcaacatgtcaagaacaataat
tatcatgaaaatctgcacggttgtttgagagctttgcatgaaggggattgcaatgggttt
catggaaaactgaaggatgctaagaaggagcttgtattgtccatttcccgtgcaagtgaa
gaaagcactgaatttatatactcagcagtagtgaaacttcagattctttatcatcttgga
ctagtttgggatcttcgctggacgacatcttcacatgaaagtatgcatggctatccagtc
aaacaaatggcatgtgctgaccctgtgacgccaacaatggagcagttttcttggctgaat
aaggattggatctctattactacacaaactcagttccacatgaatttgttggagccatta
gtcgcatttaggcgagtcctcctccaaatcttgggatgtgagcaatgtaccatgcagcat
cttttgcagtctgcttccttacttcgcaagggatcaaagttttctcatgcagctgcgtct
ctgcatgagttcaagttcctttgtgcaaaaagtgatggaggacaacctgttccagattgg
cttggaaggattgaagaggcgaaaatattacatgcccaagggcggcatgaagttgccatc
agtctggcgaactacatcttacaaaattatcaattaaaagaagaggcttcagatatatac
cgtgtgattgggaagtggctagcagaaaccagatcgagcaactctagaacaattttagac
aagtacctcaagcctgcagtttcgcttgccaaaaacccgagttccgagatcagcaaaaga
ttggtagatagacaaagccagacttggtttcatctggcacattatgcagatgctctgttt
aaaaattatgaggagagactctcttccagtgaatggcaagctgcaatgcggctacgaaaa
cacaagacgaaagagttggagctgcttattaaacggtataagagttcaaagaagggggaa
caatctgactattcactgaagattcaagagctgcagaagcaattaacaatggacaaagaa
gaggcagaaaagctgcaggttgacagggataactttctgaaacttgcgttggaggggtat
caacgttgcctgcaaattggtgacaaatatgatgtccgagtggtctttagacaagtatcc
atgtggtttaatctcacctcccagaaagatgttattgataacatgttgagcaccattagt
gaggttcagtcttacaaatttgtaccacttgtttatcagattgcttcaaggttgggtagc
tctagagatgaatcaggatctaacagttttcagtctgctctggtttcacttctcagaaaa
atggccattgatcatccataccatactatccttcagcttctggctttggcaaacggtgac
agaatcaaggataaccaacgcagtagaaactctttcgtggttgatatagataaaaaggtt
gctgcagagcatcttttgcaggatgtatcacagcatcatgggcctatgattagacaaatg
aaacaactggttgatatctacatcaagcttgcagagcttgaaacgaggagagaggatact
aataaaagggtagcactgccaagagaaattcgtagtgtgaaacaattggaacttgtacct
gtagtgactgctacaattcctgttgaccgtagctgccaatacaatgaagggtcgttccct
tctttcagaggtttatcagattctgttacagtgatgaatggtattaatgctccaaaagta
gttgaatgctttggctctgatggtcgaaaatataagcaacttgcaaaatctggcaatgat
gacctcagacaagatgctgttatggaacaattttttgggctcgtcaatacctttctacat
aataatcgggacacatggaagagaagattagctgtacgcacatacaaggttgttcctttt
accccaagcgctggtgttcttgagtgggttgatggtacaattccacttggagattatctt
ataggaagctcaagggctgggggcgctcatggtcgttatggcattggaaactggaattat
tcaaaatgccgagaacatatgtcgagtgcaaaagacaagcgcaaagccttcatggatgtc
tgcacaaacttcaggcctgtcatgcattactttttcctggaaaagttcctgcatcctgct
gactggtttgtgaagaggcttgcgtatacacgtagtgttgcagctagttcaatggttggg
tacatcgttggtcttggtgaccgccatgccatgaatattttaatcgatcaagctacagca
gaagttatccatatagatcttggagttgcctttgaacaaggattaatgctcaagactcct
gaacgggtccctttcaggctgacaagagatataattgatggaatgggtatcacaggagtg
gaaggcgttttcaggagatgttgcgaagaaaccttgtctgtaatgcgaacaaataaagag
gccctccttacaattgttgaagttttcatacatgatcctctatataaatgggcattgtcc
cctttaaaagctttgcaaagacagaaggaaactgaagattacgatggcgtgaacttagaa
ggattacaagaggaattcgaaggtaacaaggatgctgcacgtgccttgatgcgtgtcaag
caaaaacttgatggctatgagggtggtgagatgagaagcatacatggccaggcacagcaa
ctaatacaagatgcgatcgacacagatcgtttatcccatatgttccctggctggggagcc
tggatgtaa

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