Bradyrhizobium amphicarpaeae: CIT40_21585
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Entry
CIT40_21585 CDS
T05700
Symbol
rfaD
Name
(GenBank) ADP-glyceromanno-heptose 6-epimerase
KO
K03274
ADP-L-glycero-D-manno-heptose 6-epimerase [EC:
5.1.3.20
]
Organism
brq
Bradyrhizobium amphicarpaeae
Pathway
brq00540
Lipopolysaccharide biosynthesis
brq01100
Metabolic pathways
brq01250
Biosynthesis of nucleotide sugars
Brite
KEGG Orthology (KO) [BR:
brq00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00540 Lipopolysaccharide biosynthesis
CIT40_21585 (rfaD)
09180 Brite Hierarchies
09181 Protein families: metabolism
01005 Lipopolysaccharide biosynthesis proteins [BR:
brq01005
]
CIT40_21585 (rfaD)
Enzymes [BR:
brq01000
]
5. Isomerases
5.1 Racemases and epimerases
5.1.3 Acting on carbohydrates and derivatives
5.1.3.20 ADP-glyceromanno-heptose 6-epimerase
CIT40_21585 (rfaD)
Lipopolysaccharide biosynthesis proteins [BR:
brq01005
]
Core region
CIT40_21585 (rfaD)
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GFIT
Motif
Pfam:
Epimerase
GDP_Man_Dehyd
3Beta_HSD
RmlD_sub_bind
Polysacc_synt_2
NAD_binding_4
KR
Motif
Other DBs
NCBI-ProteinID:
AWM02358
UniProt:
A0A2U8PYQ8
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All DBs
Position
complement(4953255..4954235)
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AA seq
326 aa
AA seq
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MLLVTGGAGFIGSNVVAALNDAGRSDVVVCDVLGNEGKWRNLAKRQLVDIVPPDELMDWL
KGRKLDAMIHLGAISATTATDGDLVFETNFRLSMRLLDWCTAGAVPFIYASSAATYGDGE
TGFDDDGSLPALKKLRPMNLYGWSKHMFDLAVAERAARGEKLPPQWVGLKFFNVFGPNEY
HKGSMMSVLARRFDDVKAGRVVQLFKSHREGIADGDQRRDFIYVDDVVRVVMWLLATPSV
SGLFNVGTGKARSFKDLMQAAYAALGTRPNIEYIDMPEQIRGAYQYFTQSEVDRLHRAGY
NGGFTTLEDAVKAYVGDYLDRPDRFR
NT seq
981 nt
NT seq
+upstream
nt +downstream
nt
atgttgctagtgaccggcggggccggttttatcgggtcgaatgtcgtggccgcgctcaat
gacgccggccgcagcgacgtcgtggtctgcgatgtcctcggcaacgagggcaagtggcgg
aacctcgccaagcgccagcttgtggatatcgttccgcccgacgagctgatggactggctg
aagggccgcaagctggacgcaatgatccatctcggagcaatttccgcgaccaccgcgacc
gacggcgacctcgtcttcgagaccaatttccgcctgtcgatgcgccttctcgactggtgc
acggcgggcgcggtgcccttcatttatgcctcctcggcggcgacctatggcgacggcgag
acgggttttgacgacgacggctcgctgccggcgctgaagaaactgcggccgatgaatctc
tacggctggagcaagcacatgttcgatctcgcggtcgccgaacgtgccgcgcgcggcgag
aagctcccgccgcaatgggtgggcctgaaattcttcaacgtgttcggccccaacgagtac
cacaagggctcgatgatgagcgtgctggcgcggcgcttcgacgacgtcaaggcgggccgc
gtcgtgcaattgttcaagtcgcaccgcgagggcatcgccgacggcgatcagcgccgcgat
ttcatctatgtcgacgacgtcgtgcgcgtggtgatgtggctgctcgcgacaccatcggta
tcaggactcttcaacgtcggaaccggcaaggcgcgcagcttcaaggatctgatgcaggcc
gcctatgcggcgctcggcaccaggcccaacatcgaatatatcgacatgcccgagcagatc
cgcggggcctaccagtacttcacccagagcgaggtcgatcgcctccaccgcgccggctat
aatggcggcttcacgacgctcgaggacgcggtgaaggcctatgtcggggattacctcgac
cggcccgaccgcttccgctga
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