Bipolaris sorokiniana: COCSADRAFT_147056
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Entry
COCSADRAFT_147056 CDS
T03124
Name
(RefSeq) hypothetical protein
KO
K02328
DNA polymerase delta subunit 2
Organism
bsc
Bipolaris sorokiniana
Pathway
bsc03030
DNA replication
bsc03410
Base excision repair
bsc03420
Nucleotide excision repair
bsc03430
Mismatch repair
bsc03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
bsc00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
COCSADRAFT_147056
03410 Base excision repair
COCSADRAFT_147056
03420 Nucleotide excision repair
COCSADRAFT_147056
03430 Mismatch repair
COCSADRAFT_147056
03440 Homologous recombination
COCSADRAFT_147056
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
bsc03032
]
COCSADRAFT_147056
03400 DNA repair and recombination proteins [BR:
bsc03400
]
COCSADRAFT_147056
DNA replication proteins [BR:
bsc03032
]
Eukaryotic type
DNA Replication Elongation Factors
DNA polymerase delta complex
COCSADRAFT_147056
DNA repair and recombination proteins [BR:
bsc03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
Long Patch-BER factors
DNA polymerase delta complex
COCSADRAFT_147056
MMR (mismatch excision repair)
DNA polymerase delta complex
COCSADRAFT_147056
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DNA_pol_E_B
DNA_pol_D_N
Motif
Other DBs
NCBI-GeneID:
19131399
NCBI-ProteinID:
XP_007702269
JGI:
Cocsa1_147056
UniProt:
M2SYL9
LinkDB
All DBs
Position
Unknown
AA seq
519 aa
AA seq
DB search
MTKLQDSLLQGEPFEDAPLPPSRNASAYNPLHHFVLPPGTDRHYSQQFADMYFLRLIQLK
KTVKERAEEAWHNFELGGQKASFVDRVLDVRQGELCWVVGTVYMEMAQKPNVLDDIGKDH
WIADPPQRDTYISPSGGDEMMLEDESGRLRVTGEPLHGHFVTGCILAALGTEEADGTFKV
IATQCADLPRQPPRWERDDIALSKEKQSIPKREPAGKLAIVSGLGLTGADDDEVALDLLV
EYLTGEAADPSTQEDASKITRLMIAGGSLARGSPILSREDFAAKKSAARHYGYDASSYNA
APTERLDEFLCEILPTLPITMLPGASDPSNVALPQQPLHPALFPNTRLYAEPPIASNETL
NGFDAVTNPWTGDIDGYRVLSTGGQTVKDLLKYFKHVKSVDAMEMMLRWRCVAPTAPDTL
WCYPFQDHDPLMLTECPHMYIAGCQKKFEKKIIKDPAGQKVLIVSVPKFHTTGKIVLVDM
ESWDVEVVKVGVKGEKKSKRKGYAATEGNGDTKMEELEE
NT seq
1560 nt
NT seq
+upstream
nt +downstream
nt
atgaccaaactgcaagatagcctgctccaaggcgagccttttgaggatgcaccgctccca
ccgtcccgaaatgcatctgcatacaacccgctccaccatttcgtattaccgccaggcacc
gatagacattactcacaacaattcgctgacatgtactttctacgtctgattcaactgaag
aagacggtaaaagagagagcagaggaagcctggcacaactttgagttgggtggacagaaa
gcaagctttgttgaccgtgtgcttgatgtgcgacaaggcgaactgtgctgggtagtagga
acggtatacatggaaatggcacagaagccgaatgtgttggacgatattgggaaagatcac
tggatagccgatccccctcaacgcgatacctacatatctccctctggcggcgacgagatg
atgctcgaggatgagtcgggacgccttcgagtcacgggcgagcctctgcacggccacttt
gtcacagggtgtatacttgcagcgttgggtacggaagaggctgatggcacattcaaggtc
attgcaacacaatgcgctgacctaccgagacaaccgccgcgctgggaacgtgacgacata
gcgctctcaaaggaaaagcaaagcataccaaaacgcgagcccgctggaaagctagccatt
gtgtctgggctgggtcttacaggtgcagatgacgatgaggtagcgctggatctgctcgtg
gagtacttgacaggagaagcggcagacccatcaacacaagaagatgcctcgaaaataaca
cgcctaatgatagcaggaggctcgttagcacgcggctcaccaattctatcacgagaagac
tttgctgcgaagaagagcgcagccagacactacggatacgatgcctcatcatacaacgca
gcaccaactgaacgcctcgacgagtttctctgcgagatactccctaccctccctatcacc
atgctcccaggcgcatcagacccctcaaacgtcgccctcccccaacagcccctccacccc
gcgctcttccccaacaccagactctacgctgagccccctatcgccagcaacgaaaccctc
aatggcttcgacgccgtaacaaacccctggaccggcgacattgacggctaccgcgtcctc
agtacaggcggccaaaccgtcaaagacctactaaaatacttcaagcacgtcaaatcggtc
gacgcaatggaaatgatgctccgctggcgctgtgtagcccccaccgctccggacactctc
tggtgctaccccttccaagaccacgatcccctcatgttaaccgaatgcccgcacatgtac
attgctggctgccaaaagaagtttgaaaagaaaatcataaaagacccggcaggccagaag
gtgctgattgttagtgtaccaaagttccataccactggcaagatcgtacttgttgatatg
gagagttgggatgttgaggttgtcaaggttggggtgaagggggaaaagaagagcaaaagg
aaggggtacgcggcgacggagggaaatggggataccaagatggaagaattggaagagtag
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