Bipolaris sorokiniana: COCSADRAFT_177087
Help
Entry
COCSADRAFT_177087 CDS
T03124
Name
(RefSeq) hypothetical protein
KO
K01640
hydroxymethylglutaryl-CoA lyase [EC:
4.1.3.4
]
Organism
bsc
Bipolaris sorokiniana
Pathway
bsc00280
Valine, leucine and isoleucine degradation
bsc00650
Butanoate metabolism
bsc01100
Metabolic pathways
bsc04146
Peroxisome
Brite
KEGG Orthology (KO) [BR:
bsc00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00650 Butanoate metabolism
COCSADRAFT_177087
09105 Amino acid metabolism
00280 Valine, leucine and isoleucine degradation
COCSADRAFT_177087
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
COCSADRAFT_177087
Enzymes [BR:
bsc01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.3 Oxo-acid-lyases
4.1.3.4 hydroxymethylglutaryl-CoA lyase
COCSADRAFT_177087
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
HMGL-like
Motif
Other DBs
NCBI-GeneID:
19133065
NCBI-ProteinID:
XP_007694667
JGI:
Cocsa1_177087
UniProt:
M2T4E1
LinkDB
All DBs
Position
Unknown
AA seq
380 aa
AA seq
DB search
MSAKFLCLRSARLAARYPCHRRAFASAASSRADHVRIVEVGPRDGLQNEKQTVPLATKID
LVERLAKTGLTTIEAGSFVAPKWVPQMANSAEIFEHVLSHPPPSPQPITYQWLLPNVKGL
DNFLSTWQSKSQPGQDAYSTPPPSPGPNDGSVSNASSQAEASSSPSSPRHEVSIFTAATE
SFSQKNTNCSIAESLKRFEPIMSKAKEMNLNVRAYISVALGCPYEGPNVDPHKVAELAVS
LLEMGADEISVGDTTGMGTAPKTMELLKTLNAAGIDKNDLALHFHDTYGQALVNSVVALE
HGIRTFDAAVGGLGGCPYSPGATGNVATEDLVHCLHSLGANTGVDIEKLAEVGQWISQEL
GRPNESRAGKATLAKLRRVA
NT seq
1143 nt
NT seq
+upstream
nt +downstream
nt
atgtctgccaaatttctctgcctccgctctgcgcgtcttgccgcgcgctatccgtgtcat
cgacgagcctttgcctcagccgcctctagccgcgccgaccacgttcgcattgtagaagtt
gggccacgcgatggattacagaatgagaagcagacggtgccgctggctacaaagatagac
ttggtagagaggctggcaaagaccgggttgacaaccatcgaagccggctctttcgttgcg
ccaaaatgggtgccgcagatggccaattcagcagagatattcgaacatgtcctttctcat
ccccctccctcgcctcaaccaatcacataccaatggcttctgccaaacgtaaaaggactc
gacaacttcctctctacctggcaatccaaatcccagcctggccaagatgcatactcgacg
cccccgccttccccaggaccgaatgatggatcagtttcgaacgcatcctctcaggctgaa
gcatcaagttcgccgtcatcacctagacacgaagtctcaatcttcacagcggcgaccgag
tccttttcccagaagaatacaaattgctccatagcagaatccctgaagcgctttgagcca
atcatgtccaaagcaaaggaaatgaacctaaatgtgcgcgcgtacatttcggttgcactg
ggttgcccatatgaaggtccgaacgtcgatccccacaaagtggcagagctggctgtgagt
ctacttgagatgggcgccgacgagatctctgtaggagatactacgggcatgggtactgcg
cctaagacgatggagcttctgaaaacactaaacgctgctggcatcgacaaaaacgatctt
gcacttcatttccacgatacatacggtcaagcgctagtcaactcggtcgtagctcttgag
catggaattcgcacctttgatgcggcagtgggtggtcttggaggttgtccatatagcccc
ggtgcaactggaaatgtggcgacggaagatcttgttcactgcctccatagcttgggagcc
aatactggtgtggatattgagaagctcgcagaagtaggccaatggatttctcaagagttg
ggaagaccgaatgaaagtagagctggcaaggcgaccttggctaagttacggagagtagcg
taa
DBGET
integrated database retrieval system