Bipolaris sorokiniana: COCSADRAFT_210197
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Entry
COCSADRAFT_210197 CDS
T03124
Name
(RefSeq) glycoside hydrolase family 28 protein
KO
K01213
galacturan 1,4-alpha-galacturonidase [EC:
3.2.1.67
]
Organism
bsc
Bipolaris sorokiniana
Pathway
bsc00040
Pentose and glucuronate interconversions
bsc01100
Metabolic pathways
Module
bsc_M00081
Pectin degradation
Brite
KEGG Orthology (KO) [BR:
bsc00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
COCSADRAFT_210197
Enzymes [BR:
bsc01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.67 galacturonan 1,4-alpha-galacturonidase
COCSADRAFT_210197
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SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Glyco_hydro_28
Motif
Other DBs
NCBI-GeneID:
19134382
NCBI-ProteinID:
XP_007694772
JGI:
Cocsa1_210197
UniProt:
M2SQD2
LinkDB
All DBs
Position
Unknown
AA seq
446 aa
AA seq
DB search
MRVTDIFSCALLQASIALSTPVEELGTKAAAAKRLPPVPFFPGKASLGPISRKKICTLKA
LGGGKDDSANILNAVKQCNNGGHVVFPKNQQFTIGTALDLTFLNSIDLDIQGTIQFTNDT
DYWQANSFKQVFQNATTFFQLGGKDINVYGGGTLDGNGQAWYDLYAKDIYILRPILFGLI
GAKNAKISDLKFRYSPQWYTLVANSSEVVFSNIDIFGDSKSKNPAKNTDGWDTYRSNNIV
IQNSNINNGDDCVSFKPNSTNILVQNLVCNGSHGISVGSLGQYPGEVDIVENILVRNISM
SNASDGARIKVWPGASSALSGDLQGGGGSGAVRNVTYDGMIVKNVDYAIEITQCYGQKNL
TLCNQFPSNLTISDITIKNFKGTTSKKYAPRVGYVVCSSPKVCRNISIENIDVKSPSGTN
LYTCANVEGIQSQVNCTVEGDKGGHS
NT seq
1341 nt
NT seq
+upstream
nt +downstream
nt
atgcgtgtcaccgacatcttctcgtgcgccctgctacaagcttcgatagcattatcgacc
ccggttgaagagcttggaacaaaggctgctgcggcaaaacgtctcccgcccgtgccgttt
ttcccgggaaaggcatccttggggccgatttcccgaaagaagatctgcaccctcaaggct
ctcggtggcggcaaggacgattctgcaaacattctcaacgctgtcaagcaatgtaacaat
ggcggtcatgttgttttccccaagaaccagcagttcaccattggcactgccttggatctc
acgttcctcaattccattgacctagatattcaaggaaccatccaattcacaaacgacact
gattactggcaagccaattccttcaagcaggttttccagaatgcaaccaccttcttccag
ctcggaggcaaggacatcaatgtctacggcggcggcaccctcgacggcaatggccaagcc
tggtacgacctctacgccaaagacatttacatcctacggcccatcctctttggcctgatt
ggcgccaaaaacgccaaaatctctgatctcaaattccgctacagcccgcagtggtacacc
ctcgtcgccaactcgagtgaagttgtcttctccaacattgacattttcggtgacagcaag
agcaagaatcccgccaagaacactgacggctgggacacgtaccgctccaacaacatcgtc
atccaaaactccaacatcaacaacggcgacgactgcgtctccttcaagccaaacagcaca
aacatccttgtgcaaaacctcgtctgcaacggcagccatggcatcagcgtcggctcgctc
ggccagtaccccggcgaagtcgacattgttgaaaacatcctcgtccgcaacatctccatg
tccaacgcatctgacggtgcacgcatcaaagtctggcctggcgcctcgtccgcgctctcc
ggcgacctgcaaggtggcggcggcagcggcgccgtgcgaaatgtcacgtatgacggcatg
atcgtcaagaatgtcgactacgcgattgagattacacagtgttatgggcagaagaacttg
accctatgtaatcagttcccctccaacctcacaatctccgacatcaccatcaaaaacttc
aagggcacaacgagcaagaagtacgctccccgcgtcggctacgtcgtatgctccagccca
aaagtctgccgtaatatctcgattgagaacatcgatgtcaagagtccaagtggcacgaac
ctgtacacttgtgcgaatgtcgaggggattcagagtcaggttaattgtaccgtggaaggg
gataaggggggccattcttag
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