Bipolaris sorokiniana: COCSADRAFT_75709
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Entry
COCSADRAFT_75709 CDS
T03124
Name
(RefSeq) hypothetical protein
KO
K03011
DNA-directed RNA polymerase II subunit RPB3
Organism
bsc
Bipolaris sorokiniana
Pathway
bsc03020
RNA polymerase
bsc03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
bsc00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
COCSADRAFT_75709
09124 Replication and repair
03420 Nucleotide excision repair
COCSADRAFT_75709
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
bsc03021
]
COCSADRAFT_75709
03400 DNA repair and recombination proteins [BR:
bsc03400
]
COCSADRAFT_75709
Transcription machinery [BR:
bsc03021
]
Eukaryotic type
RNA polymerase II system
RNA polymerase II
Core subunits
COCSADRAFT_75709
DNA repair and recombination proteins [BR:
bsc03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase II complex
COCSADRAFT_75709
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNA_pol_A_bac
RNA_pol_L
Motif
Other DBs
NCBI-GeneID:
19140520
NCBI-ProteinID:
XP_007694597
JGI:
Cocsa1_75709
UniProt:
M2T452
LinkDB
All DBs
Position
Unknown
AA seq
332 aa
AA seq
DB search
MDYDPDGGQINVRFLQADNQRAHFIVQNFNLETANALRRVMLAEIPTLAIDVVEVFDNTS
VLADEFVCHRLGLIPLSSKGVDDLLYSRDCDCEGYCDNCSVVLTLNAKCTGSEVMKVYAR
DLVIESRPPNDELGRPVITDSEGTGSCIVKLRRGQAINMKCIAKKGIAKEHAKWAPSAAI
GFEYDPANKLHHLDYWHEEDAEKEWPKDEARVNLDGGPPNPDEPFNYNAVPTRFFYDVET
VGGIEPDQIVAKGIQRLQIKLAEVLKELSGGIGDHEDFGGAQSPMLNGGGYGDAGGYTPV
GGPGGYGGASSWGGAAQGGTTPYGATPYGQGW
NT seq
999 nt
NT seq
+upstream
nt +downstream
nt
atggactacgatccagatggcggccaaatcaacgtccgcttcctccaggccgacaaccag
cgagcccacttcattgttcagaacttcaatctcgagaccgcaaatgcacttcgccgtgta
atgctcgccgagatcccgacgctcgccatcgacgtcgtcgaagtgtttgacaacacatcg
gttcttgccgatgagtttgtctgtcatcgcctcggtctcatccccttgtcgtcaaagggc
gtagacgacctgttgtattcgcgcgactgtgactgcgagggctactgcgacaactgcagc
gtcgttcttactctcaatgccaaatgcacaggcagcgaggtcatgaaggtgtatgcgcgc
gatctggtcatcgagtcgaggccgccgaatgatgagctaggaagaccggtgattacagat
tcggaggggacgggcagttgtatcgtgaagctgcgcagaggccaagccatcaacatgaag
tgcattgcaaagaagggcattgcaaaggaacacgccaagtgggcacccagtgcagcgatt
ggattcgaatacgaccccgcaaacaaattgcaccacctggactactggcatgaggaagac
gcggagaaggagtggcccaaagacgaagcccgtgtcaatctcgatggcggtccacccaac
cccgatgagcccttcaactacaacgccgtgcccacacgcttcttctacgacgtcgaaaca
gtcggtggtatcgagcccgatcagattgtcgcaaaaggaatccaacggttacaaatcaaa
ctcgccgaagtcctcaaagaactatctggtggcattggagaccacgaggatttcggcggt
gcccagagccccatgttgaatggaggaggctacggtgatgcaggaggttacacgccggtt
ggaggccccggaggctatggtggtgccagttcctggggtggagcagcccaaggaggtact
acgccatatggtgctacgccttatggtcagggctggtag
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integrated database retrieval system
