Bifidobacterium scardovii: BBSC_0821
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Entry
BBSC_0821 CDS
T03975
Name
(GenBank) translation elongation factor
KO
K18220
ribosomal protection tetracycline resistance protein
Organism
bsca
Bifidobacterium scardovii
Brite
KEGG Orthology (KO) [BR:
bsca00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
01504 Antimicrobial resistance genes [BR:
bsca01504
]
BBSC_0821
Antimicrobial resistance genes [BR:
bsca01504
]
Gene variants
Tetracycline resistance genes
Others
BBSC_0821
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
GTP_EFTU
EFG_C
EFG_IV
EFG_III
MMR_HSR1
Motif
Other DBs
NCBI-ProteinID:
BAQ30901
LinkDB
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Position
982297..984480
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AA seq
727 aa
AA seq
DB search
MKQIVAGILAHVDAGKTTLSEALLYRTGRIRKLGRVDHGDAFLDTDAMERARGITIFAEP
AIIQTGDLAVTLLDTPGHVDFAAETERTLRVLDYAVLVVSGADGVQGHTATLWRLLARYR
VPTFIFVNKMDAPGADRAALLSQLRGRFGDGCIDFEGGNDPGVMEDLAMQDERATDALLG
EGRVPDGDIRRMIAERKVFPCFFGSALRMEGIDEFLAGFGRYVREPAYGDGFGARVYKVS
HDAQGNRLTWLKVTGGELRAKMTLTNAGADEDAGGRGQENGLPAGGLADSLVDPERIWRE
KADQVRLYSGAKFTVSDRAPAGSICAVTGLTRTFPGEGLGLESDAGSPVLQPVLTYTLLP
GGNDVHKCLMALRELDDEDPLLHVVWQERLQEIHVQLMGAVQLEIVRQMMHDRFGLDVEF
GPGGILYKETITHPVEGVGHFEPLRHYAEAHVLLEPGDPGSGLTFASSCSENELARNWQR
LILTHFAEKEHLGVLIGAPINDMRLTLVAGRAHEKHTEGGDFRQATYRAIRQGLMMALVE
GDVESRFGGRDEDDAAEQIAEERGARKRDDADAGDAGADAPEAARAAAEHPGWCRVLEPW
YRFRLEIPQDMLGRAMSDVQRMAGRFDPPLSDGEYAVLEGDCPVSEMRDYAMDVNAYTHG
LGRLSCTFGGYRPCHDEAGVIERAAYDPEADLDNTPDSVFCAHGAGYPVKWYRVPDFMHL
GYASDVM
NT seq
2184 nt
NT seq
+upstream
nt +downstream
nt
atgaagcagatcgtcgcgggcattctggcgcatgtggacgcgggcaagaccacgttgtcg
gaggcgctgctctatcgcaccgggcggatccgcaagctcggccgtgtcgatcacggcgac
gccttcctcgacaccgacgcgatggagcgcgcccgcggcatcacgatcttcgccgaaccg
gccatcattcagaccggcgatctggccgtcaccctgctcgataccccggggcacgtcgat
ttcgcggccgagaccgagcgcacgttgcgcgtgctcgactacgcggtcctcgtcgtgtcg
ggcgccgacggcgtgcagggccataccgccacgctgtggcggctgctggcgcgctaccgg
gtgccgaccttcatcttcgtgaacaagatggacgcgcccggcgccgatcgcgcggcgctg
ctctcgcagctgcgcggccggttcggcgacggctgcatcgacttcgagggaggaaacgac
cccggggtcatggaggatctcgccatgcaggacgagcgcgcgacggatgccctgctgggg
gagggccgcgtgcccgacggcgatatccggcgcatgatcgccgagcgcaaggtgttcccc
tgctttttcggctcggcgctgcgcatggagggcatcgacgagttcctcgccggattcggg
cgctacgtgcgcgagccggcatacggcgacgggttcggcgcgcgggtgtacaaggtatcg
cacgatgcgcagggcaaccggctgacttggctgaaggttaccggcggcgagctgcgcgcg
aagatgacgctgacgaacgccggggccgatgaggacgccggcggccggggccaggagaac
gggctgccggccggcggcttggccgacagcttggtcgaccccgaacggatatggcgggag
aaggccgatcaggtacgcctgtattcgggcgcgaagttcacggtctccgatcgcgccccg
gccggttccatctgcgcggtgaccggcctgacgcgcaccttccccggcgaggggcttggc
ctggagtccgatgccggcagcccggtgctgcagccggtgctcacctatacgctgctgccc
ggcggcaacgacgtccacaagtgcctgatggcgttgcgcgagctggacgacgaggacccg
ctgctgcacgtcgtgtggcaggagcggttgcaggagatccatgtgcagctgatgggcgcg
gtgcagctggagatcgtccggcagatgatgcacgaccggttcgggctcgacgtggaattc
ggccctggcggcatcctgtacaaggagacgatcacgcacccggtcgagggcgttggccac
ttcgagccgctgaggcactatgccgaggctcatgtgctgctcgagccgggcgatccgggc
agcgggctgaccttcgccagctcatgcagcgagaacgagctggcgcgcaactggcagcgc
ctgatccttacgcatttcgcggaaaaggagcatctcggggtgctgatcggcgcgccgatc
aacgatatgcggctgacgctggtggccgggcgcgcgcacgagaagcacacggaaggcggc
gatttccgccaggcgacctatcgcgcgatccgccagggcctcatgatggcgctggtcgag
ggcgacgtcgagtcgcggttcggcgggcgcgacgaggatgacgccgcggaacagatcgcg
gaggagcgcggcgcgcggaagcgcgacgatgcggatgccggcgatgccggggcggatgcg
cccgaggccgctcgcgccgcggcggagcaccccggctggtgccgcgtgctcgagccgtgg
taccggttccgtcttgagattccgcaggacatgctcggccgtgccatgtctgacgtgcag
cgcatggccgggcggttcgacccgccgctctcggacggggagtacgcggtgctggagggc
gattgcccggtctccgagatgcgcgactacgcgatggatgtgaacgcctacacgcatggg
ctcgggcggctctcctgcactttcggcgggtaccggccttgccacgacgaggccggggtc
atcgagcgggccgcctacgacccggaagcggacctcgacaatacgcccgattcggtgttc
tgcgcgcacggcgccggctacccggtcaagtggtatcgcgtgccggacttcatgcacctc
ggctacgcgagcgacgtgatgtag
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