Blastococcus saxobsidens: BLASA_3698
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Entry
BLASA_3698 CDS
T01752
Symbol
rimO
Name
(GenBank) Ribosomal protein S12 methylthiotransferase rimO
KO
K14441
ribosomal protein S12 methylthiotransferase [EC:
2.8.4.4
]
Organism
bsd
Blastococcus saxobsidens
Brite
KEGG Orthology (KO) [BR:
bsd00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
bsd03009
]
BLASA_3698 (rimO)
Enzymes [BR:
bsd01000
]
2. Transferases
2.8 Transferring sulfur-containing groups
2.8.4 Transferring alkylthio groups
2.8.4.4 [ribosomal protein uS12] (aspartate89-C3)-methylthiotransferase
BLASA_3698 (rimO)
Ribosome biogenesis [BR:
bsd03009
]
Prokaryotic type
ribosomal protein modification factors
BLASA_3698 (rimO)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UPF0004
Radical_SAM
TRAM_2
TraT
Motif
Other DBs
NCBI-ProteinID:
CCG04554
UniProt:
H6RVS4
LinkDB
All DBs
Position
complement(3572728..3574194)
Genome browser
AA seq
488 aa
AA seq
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MTATPRPARTVAVVTLGCARNEVDSEELAGRLAADGYELVEDADGADAVLVNTCGFIETA
KKDSVDAILAATDSGASVVAVGCMAERYGSELAGALPEATVLGFDDYAAIGERLDDVLTG
RPLVPHTPRDRRTLLPISPVQRSAVLAGAGGRGEDSAPAIPGHDWLRRRRLASGPTAALK
LASGCDRRCAFCAIPTFRGAFVSRPPAEVLSEAAWLASQGVRELVLVSENSTSYGKDLGD
LRSLEKLLPQLAAVEGIVRVRVAYLQPAELRPGLLEVIAGAGGHGGVIAPYFDLSFQHSS
PTLLRRMRRFGGTDDFLRIIERARSLAPGAGFRTNVILGFPGETEDDVAELERFLTEGRL
DAVGVFGYSDEEGTEAMRLAGKLAQHEIDARVRRITDLVEELTAQRAEDRIGERVEVLLT
EDLSATEGPGTWLGHAGHQDPDADGTTTVTGVPADAVDGRLVDAEVVDTEGVDLVARALV
PAAAPAGR
NT seq
1467 nt
NT seq
+upstream
nt +downstream
nt
gtgacagccacgccccgccctgcccggaccgtggccgtggtgacgctcgggtgcgcccgc
aacgaggtcgactccgaggagttggccggccgactggccgccgacgggtacgagctcgtc
gaggacgccgacggcgccgacgccgtcctggtcaacacctgcgggttcatcgagacggcc
aagaaggactcggtcgacgcgatcctggctgcgaccgactccggtgcctccgtcgtggcg
gtcggctgcatggccgagcgctacggctccgagctcgccggggcgctgccggaggccacc
gtgctcggcttcgacgactacgccgcgatcggcgagcggctcgacgacgtcctcaccggc
cgcccgctcgtgccgcacaccccgcgcgaccgccgcaccctgctgccgatcagccccgtc
cagcgttcggcggtcctcgccggggccggggggcggggagaggacagcgcgccggccatc
cccgggcacgactggctccgccggcgccggctggcctcgggcccgacggcggcgctgaag
ctcgcctcgggctgcgaccggcgctgcgcgttctgcgcgatcccgaccttccggggcgcc
ttcgtctcccgtccgcccgccgaggtgctgtccgaggcggcgtggctggcctcgcagggc
gtccgcgagctggtgctggtcagcgagaactccacgtcctacggcaaggacctcggcgac
ctgcgctcgctcgagaagctgctgccgcagctggccgccgtcgaggggatcgtgcgggtc
cgcgtggcctacctgcagccggccgagctgcgccccgggctcctggaggtcatcgccggt
gcggggggccacgggggagtcatagctccgtacttcgacctgtcgttccagcactcctcg
ccgacgctgctgcgccgcatgcgacggttcggtggcaccgacgacttcctgcgcatcatc
gagcgggcccgtagcctggcaccgggcgccggcttccgcaccaacgtcatcctcggcttc
cccggcgagaccgaggacgacgtcgctgaactcgagcgcttcctcaccgagggccgcctg
gacgcggtcggtgtgttcggctactccgacgaggagggcaccgaggcgatgcggctggcc
ggcaagctcgcgcagcacgagatcgacgcccgcgtccggcggatcaccgacctggtcgag
gagctcaccgcgcagcgggccgaggaccggatcggcgagcgggtcgaggtcctgctcacc
gaggacctctcggccaccgaggggcccgggacatggctggggcacgccgggcaccaggac
cccgacgccgacggcaccaccaccgtcaccggggtgccggccgacgcggtcgacggccgg
ctggtcgacgcggaggtcgtcgacaccgagggcgtcgacctcgtcgcccgcgccctcgtg
cccgccgccgccccagcggggcggtga
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