Burkholderia seminalis: WJ12_26330
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Entry
WJ12_26330 CDS
T04851
Name
(GenBank) protocatechuate 3,4-dioxygenase subunit beta
KO
K00449
protocatechuate 3,4-dioxygenase, beta subunit [EC:
1.13.11.3
]
Organism
bsem
Burkholderia seminalis
Pathway
bsem00362
Benzoate degradation
bsem01100
Metabolic pathways
bsem01120
Microbial metabolism in diverse environments
bsem01220
Degradation of aromatic compounds
Brite
KEGG Orthology (KO) [BR:
bsem00001
]
09100 Metabolism
09111 Xenobiotics biodegradation and metabolism
00362 Benzoate degradation
WJ12_26330
00624 Polycyclic aromatic hydrocarbon degradation
WJ12_26330
Enzymes [BR:
bsem01000
]
1. Oxidoreductases
1.13 Acting on single donors with incorporation of molecular oxygen (oxygenases)
1.13.11 With incorporation of two atoms of oxygen
1.13.11.3 protocatechuate 3,4-dioxygenase
WJ12_26330
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Motif
Pfam:
Dioxygenase_C
PCDO_beta_N
CarboxypepD_reg
Motif
Other DBs
NCBI-ProteinID:
AOJ28400
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Position
2:complement(1249509..1250216)
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AA seq
235 aa
AA seq
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MDSPTILTPRDWPSHPAYVHPEYRSSVKRGPTRPLIPLKEKLRDQYAPVYGAEDLGALDH
DLTKNAVKNGEPLGERMVVTGRVLDEGGKPVRNTLVEVWQANAAGRYVHKVDQHDAPLDP
NFLGAGRCLTDDEGRYRFLTIKPGAYPWGNHPNAWRPNHIHFSLFGDYFGSRLVTQMYFP
GDPLLAYDPIFQGTPEAARDRLISRFSMDITEEGYALGYEFDIVLRGRDATPMER
NT seq
708 nt
NT seq
+upstream
nt +downstream
nt
atggattcccccacgatcctcacgccgcgcgactggccgtcgcatccggcctatgtccac
cccgagtaccgctcgtcggtgaagcgcggcccgacccgcccgctgatcccgctgaaagag
aagctgcgcgaccagtacgcgcccgtctacggcgccgaggatctcggcgcgctcgaccac
gacctgacgaagaacgccgtgaagaacggcgagccgctcggtgagcgcatggtcgtcacg
ggccgcgtgctcgatgaaggcggcaagcccgtgcgcaacacgctcgtcgaggtgtggcag
gcgaacgcggccggccgctacgtgcataaggtcgaccagcacgacgcgccgctcgacccg
aacttcctcggcgccggccgctgcctgaccgacgacgaaggccgctaccgcttcctgacg
atcaagcccggcgcgtatccgtggggcaaccatccgaacgcgtggcgcccgaatcacatc
cacttctcgctgttcggcgattacttcggctcgcgtctcgtcacgcagatgtacttcccc
ggcgatccgctgctcgcgtacgacccgatcttccagggcacgcccgaggccgcgcgcgat
cgcctgatctcgcgcttctcgatggacatcaccgaagaaggctatgcgctcggctacgaa
ttcgacatcgtgctgcgcggccgcgacgccaccccgatggagcgctga
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