Burkholderia seminalis: WJ12_31880
Help
Entry
WJ12_31880 CDS
T04851
Name
(GenBank) sarcosine oxidase subunit alpha
KO
K00302
sarcosine oxidase, subunit alpha [EC:
1.5.3.24
1.5.3.1
]
Organism
bsem
Burkholderia seminalis
Pathway
bsem00260
Glycine, serine and threonine metabolism
bsem01100
Metabolic pathways
Module
bsem_M00975
Betaine degradation, bacteria, betaine => pyruvate
Brite
KEGG Orthology (KO) [BR:
bsem00001
]
09100 Metabolism
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
WJ12_31880
Enzymes [BR:
bsem01000
]
1. Oxidoreductases
1.5 Acting on the CH-NH group of donors
1.5.3 With oxygen as acceptor
1.5.3.1 sarcosine oxidase (formaldehyde-forming)
WJ12_31880
1.5.3.24 sarcosine oxidase (5,10-methylenetetrahydrofolate-forming)
WJ12_31880
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
GCV_T
SO_alpha_A3
Fer2_4
GCV_T_C
Pyr_redox_2
FAD_oxidored
Pyr_redox_3
NAD_binding_8
FAD_binding_2
HI0933_like
FAD_binding_3
DAO
Pyr_redox
GIDA
Thi4
AlaDh_PNT_C
NAD_binding_7
XdhC_C
Lycopene_cycl
Motif
Other DBs
NCBI-ProteinID:
AOJ29380
LinkDB
All DBs
Position
2:complement(2547035..2550046)
Genome browser
AA seq
1003 aa
AA seq
DB search
MSQKDRLGTGGRINRAIPLTFTFNGRTYQGFQGDTLASALLANGVHFVARSFKYHRPRGI
VTADVAEPNAVVQLESGPYTVPNARATEIELYQGLVATSVNAEPTLENDKYAINQKFSRF
MPAGFYYKTFMWPRNMWPKYEEKIREAAGLGKAPDVLDADRYDKCYAHCDVLVVGGGPSG
LAAAHAAATAGARVILVDDQRELGGSLLSCRAEIDAKPALQWVEKIEAELRKLPDVTILS
RSTAFGYQDHNLVTVTQRLTDHLPVSMRKGTRELLWKVRAKRVILATGAHERPIVFGNND
LPGVMLAGAVSAYVHRFGVLPGRNAIVFTNNDRAYQTALDLKACGAKVTVVDSRASSNGA
LPAAAKRQGVTVMSGAVVTAASGKWRVSSVDVASLTNGQVGGKLQTIPCDLVAMSGGFSP
VLHLFAQSGGKACWNDEKACFLPGKPVQAEASVGAAAGEFGLARALRLAVDAGVEAAKAA
GFTAAQRPVAPQVAETVEGALQPLWLVGSREAAARGPKQFVDFQNDVAAADILLAAREGF
ESVEHVKRYTAMGFGTDQGKLGNINGMAILAGALGKTIPETGTTTFRPNYTPVSFGTFAG
RETGDFLDPIRKTCVHEWHVEHGALFEDVGNWKRPWYFPKNGEDLHAAVKRECLAVRNSV
GILDASTLGKIDIQGPDAVKLLNWMYTNPWNKLEVGKCRYGLMLDENGMVFDDGVTVRLA
DQHFMMTTTTGGAARVLTWLERWLQTEWPDMKVRLASVTDHWATFAVVGPKSRKVVQKVC
QDIDFGNEAFPFMSYRNGTVAGAKARVMRISFSGELAYEVNVPANAGRAVWEALMAAGAE
FDITPYGTETMHVLRAEKGYIIVGQDTDGSITPYDLGMGGVVAKSKDFLGKRSLARSDTA
KEGRKQFVGLLTEDEQFVLPEGAQIIAKDTQVSAVDPTPMIGHVTSSYYSPILKRSIALA
VVKGGLNKMGESVVIPLANGKRITATISSPVFYDTEGVRQHVE
NT seq
3012 nt
NT seq
+upstream
nt +downstream
nt
atgagccagaaagaccgcctcggcaccggtggccgcatcaatcgcgcgattccgttgacg
ttcacgttcaacggccgcacgtaccagggcttccagggcgacacgctcgcgtccgcgctg
ctcgcgaacggcgtgcacttcgtcgcgcgcagtttcaagtaccaccgtccgcgcggcatc
gtaacggcggacgtggccgaaccgaacgccgtcgtgcaactggagtccggcccgtatacc
gtgccgaacgcgcgcgcgaccgagatcgagctgtatcagggcctcgtcgcgacgagcgtg
aacgccgagccgacgctcgagaacgacaagtatgcgatcaaccagaagttctcgcgcttc
atgccggccggcttctactacaagacgttcatgtggccgcgcaacatgtggccgaaatac
gaagagaagatccgtgaagcggccggcctcggcaaggcgcccgacgtgctcgacgccgat
cgctacgacaagtgctacgcgcactgcgacgtgctcgtggtcggcggtggcccgtcgggc
ctcgccgccgcgcatgcggccgcgacggccggcgcgcgcgtgattctcgtcgacgaccag
cgcgaattgggcggcagcctgctgtcgtgccgcgcggagatcgacgcgaagcccgcgctg
cagtgggtcgagaagatcgaggccgagctgcgcaagctgcccgacgtgacgatcctgtcg
cgcagcaccgcgttcggctaccaggaccacaacctcgtgacggtcacgcagcgcctgacc
gatcacctgccggtgtcgatgcgcaagggcacgcgcgagctgctgtggaaggtccgcgcg
aagcgcgtgatcctcgcgaccggcgcgcacgagcgtccgatcgtgttcggcaacaacgac
ctgccgggcgtgatgctggcgggcgcggtgtccgcctacgtgcatcgtttcggcgtgctg
ccgggccgcaacgcgatcgtgttcacgaacaacgaccgcgcataccagaccgcgctcgac
ctgaaggcgtgcggcgcgaaggtgacggtcgtcgattcgcgcgcgtcgtcgaacggcgcg
ctgccggccgccgcgaagcggcagggcgtgacggtgatgagcggggcggtcgtcacggcc
gcgtcgggcaagtggcgcgtatcgtcggtcgacgtcgcgtccctcacgaacggccaggtg
ggcggcaagctgcagacgatcccgtgcgacctcgtcgcgatgtcgggcggcttcagcccg
gtgctgcacctgttcgcgcagtcgggcggcaaggcttgctggaacgacgagaaggcctgc
ttcctgccgggcaagcccgtgcaggcggaagcgagcgtcggcgcggcggccggcgaattc
gggctggcgcgcgcattgcggctcgcggtcgatgcgggcgtggaagcggcgaaggccgcg
ggcttcacggccgcgcagcgcccggtcgcgccgcaggtcgcggaaaccgtcgaaggcgca
ctgcagccgctgtggctcgtcggcagccgcgaggcagccgcacgcgggccgaagcagttc
gtcgacttccagaacgacgtggcggccgccgacatcctgctcgccgcgcgcgaaggcttc
gagtcggtcgagcacgtgaagcgctatacggcgatgggcttcggcaccgaccagggcaag
ctcggcaacatcaacgggatggcgatcctcgcgggcgcgctcggcaagacgattcccgaa
acgggcacgacgacgttccgcccgaactacacgcccgtgtcgttcggcacgttcgcgggg
cgcgaaacgggcgatttcctcgacccgatccgcaagacctgcgtgcacgaatggcacgtc
gagcacggcgcgctgttcgaggacgtcggcaactggaagcggccgtggtatttcccgaag
aacggcgaggacctgcatgcggccgtgaagcgcgaatgcctcgcggtgcgcaacagcgtc
ggcatcctcgacgcatcgacgctcggcaagatcgacatccagggccccgacgcggtgaag
ctgctgaactggatgtacacgaacccgtggaacaagctcgaagtgggcaagtgccgctac
gggctgatgctcgacgaaaacgggatggtgttcgacgacggcgtgaccgtgcgcctcgcc
gaccagcatttcatgatgaccaccaccaccggcggcgcggcgcgcgtgctcacgtggctc
gagcgctggctgcagaccgaatggcccgacatgaaggtgcggctcgcgtccgtcaccgac
cactgggcgacgttcgcggtggtcggcccgaagagccgcaaggtcgtgcagaaggtgtgc
caggacatcgacttcggcaacgaggcattcccgttcatgagctaccggaacggtaccgtc
gcgggcgcgaaggcgcgcgtgatgcggatcagcttctcgggcgagctggcctatgaagtg
aacgtgccggcgaacgcgggccgcgcggtgtgggaagcgctgatggcggccggtgccgag
ttcgacatcacgccgtacggcaccgagacgatgcacgtgctgcgcgcggagaagggctac
atcatcgtcggccaggacaccgacgggtcgatcacgccgtacgacctcgggatgggcggg
gtcgtcgcgaagtcgaaggacttcctcggcaagcgctcgctcgcgcggtcggacaccgcg
aaggaaggccgcaagcagttcgtgggcctgctgaccgaagacgaacagttcgtgctgccg
gaaggcgcgcagatcatcgcgaaggacacgcaggtgtcggcggtcgatccgacgccgatg
atcggtcacgtgacgtcgagctactacagcccgatcctgaagcgctcgatcgcgctcgcg
gtggtgaagggcggcctgaacaagatgggcgagagcgtcgtgattccgctggccaacggc
aagcgcatcaccgcgacgatctcgagcccggttttctacgataccgaaggggtgcgccag
catgtggaatga
DBGET
integrated database retrieval system