Betta splendens (Siamese fighting fish): 114849797
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Entry
114849797 CDS
T08231
Symbol
fdft1
Name
(RefSeq) squalene synthase isoform X1
KO
K00801
farnesyl-diphosphate farnesyltransferase [EC:
2.5.1.21
]
Organism
bspl
Betta splendens (Siamese fighting fish)
Pathway
bspl00100
Steroid biosynthesis
bspl01100
Metabolic pathways
Module
bspl_M00101
Cholesterol biosynthesis, FPP => cholesterol
Brite
KEGG Orthology (KO) [BR:
bspl00001
]
09100 Metabolism
09103 Lipid metabolism
00100 Steroid biosynthesis
114849797 (fdft1)
09180 Brite Hierarchies
09181 Protein families: metabolism
01006 Prenyltransferases [BR:
bspl01006
]
114849797 (fdft1)
Enzymes [BR:
bspl01000
]
2. Transferases
2.5 Transferring alkyl or aryl groups, other than methyl groups
2.5.1 Transferring alkyl or aryl groups, other than methyl groups (only sub-subclass identified to date)
2.5.1.21 squalene synthase
114849797 (fdft1)
Prenyltransferases [BR:
bspl01006
]
Terpene biosynthesis
Squalene/phytoene synthase
114849797 (fdft1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SQS_PSY
HAUS4
Motif
Other DBs
NCBI-GeneID:
114849797
NCBI-ProteinID:
XP_028997357
EnsemblRapid:
ENSBSLG00000011660
UniProt:
A0A6P7LTQ9
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All DBs
Position
24:8613821..8618298
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AA seq
456 aa
AA seq
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MAGVCCKCPVSLSAFKRSLSVAPRGCGSAPRSLAPSWRLGERGPHEAARPASVLRAASFY
QHTASPSVSCQESMRETLRTCYVYLNQTSRSFAAVIQALDGELRHAVCIFYLVLRALDTV
EDDMSIPLDKKVPMLNDFHTYLYRDEWRFTESQEKDRRVLEDFPTISLEFRNLAHEYRDV
ISDICHRMGVGMAEFLEKRVGSMKDWDQYCHYVAGLVGIGLSRLFSASQLEEPEVGQDTE
LANSMGLFLQKTNIIRDYLEDTQEGRVFWPQEAWSQFAARVEDFARPENLESALSCLNLL
VTDALRHVPDVIAYLSRLRNQSVFNFCAIPQVMAIATLSSCFNNPMVFQGVVKIRKGQAV
TLMMDATNMRAVQTIIAQYSQEILHKVSLSDPSRDKTLSILAVIQEKSALSQSSLPSRTH
LSPMYLSAAMLLAALSWQYLSTTAAQVQGTGDAHGQ
NT seq
1371 nt
NT seq
+upstream
nt +downstream
nt
atggccggagtctgctgcaagtgtccggtctcgctgtccgcgttcaagcgctccctctcg
gtggcgccgcgcggctgcggctccgcgccgcgctcgctcgcgccgagctggaggctgggc
gagcgcggcccgcacgaggccgcccggcccgccagcgtcctcagggccgccagcttctac
caacacacggcctccccgtctgtgtcctgccaggagtccatgcgcgagaccctgcggacc
tgctacgtgtacctgaaccaaaccagccggagcttcgcggccgtgatccaggcgctggac
ggggagttgagacacgcagtttgcatcttctacctggttctgcgggcgttggacaccgtg
gaggacgacatgagcattcctctggacaagaaggtgcccatgctgaacgacttccacacc
tacctgtaccgggatgagtggcgcttcaccgagagccaggagaaggaccgccgggtgctg
gaggatttccccacgatatcactggaatttagaaacctcgctcatgagtacagggacgtc
atctcggatatctgccaccgtatgggagtgggaatggcggaattcctggagaaaagagtg
ggatccatgaaagactgggaccagtattgccactacgtcgcagggctggtcggcatcggc
ctgtccaggctcttctccgcgtcccagctggaggagccggaggtggggcaggacacggag
ctggcgaactccatggggctgttcctgcagaagaccaacatcatccgagactatctggag
gacacgcaggagggacgcgtcttctggcctcaggaggcctggagtcagttcgcggctcgc
gtcgaggacttcgctcggcccgagaacctggagtcggccctgtcctgcctcaacctgctg
gtcaccgatgccctgcgtcacgtcccggatgtcatcgcctacctgtcgcgcctgcgcaac
cagagcgtcttcaacttctgtgccattccgcaggtgatggcgatagcgaccctgtcgtcg
tgcttcaacaaccccatggtgttccagggagtggtgaagatcaggaagggccaggccgtc
accctcatgatggacgccaccaacatgagagcggtgcagaccatcatcgcccagtacagc
caggagattctacacaaggtgtcgctcagcgacccgtcgcgggacaagacgctgtccatc
ctggctgtgatccaggagaagtcggccctgtcccagtccagcctcccctccaggacccac
ctgtcgcccatgtacctgtccgcggccatgctgctcgccgctctcagctggcagtacctc
agcaccacggcggcacaggtgcagggcactggcgacgcacacggacagtga
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