Bacillus subtilis subsp. spizizenii W23: BSUW23_18355
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Entry
BSUW23_18355 CDS
T01302
Symbol
rpoE
Name
(GenBank) DNA-directed RNA polymerase subunit delta
KO
K03048
DNA-directed RNA polymerase subunit delta
Organism
bss
Bacillus subtilis subsp. spizizenii W23
Pathway
bss03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
bss00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
BSUW23_18355 (rpoE)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
bss03021
]
BSUW23_18355 (rpoE)
03400 DNA repair and recombination proteins [BR:
bss03400
]
BSUW23_18355 (rpoE)
Transcription machinery [BR:
bss03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
BSUW23_18355 (rpoE)
DNA repair and recombination proteins [BR:
bss03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
BSUW23_18355 (rpoE)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HARE-HTH
DUF4777
Motif
Other DBs
NCBI-ProteinID:
ADM39706
UniProt:
E0TVC4
LinkDB
All DBs
Position
complement(3622216..3622737)
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AA seq
173 aa
AA seq
DB search
MGIKQYSQEELKEMALVEIAHELFEEHKKPVPFQELLNEIASLLGVTKEELGDRIAQFYT
DLNIDGRFLALSDQTWGLRSWYPYDQLDEETQPTVKAKKKKAKKVVEEDLDLDEFEEIDE
DDIDLDEVEEELDLDADDFDDEDLDEDDDDLEIEEDIIDEDDEDLDDEDEDLK
NT seq
522 nt
NT seq
+upstream
nt +downstream
nt
ttgggtatcaaacaatattcacaggaagagctaaaggaaatggctttagttgaaatcgct
cacgaattatttgaagaacataaaaaaccagttccttttcaggagcttttaaatgaaatt
gcatctttgctcggcgtgacaaaagaagagcttggagaccgcatcgctcaattttataca
gatttaaacattgacggccgcttcctggcgctttctgaccagacttggggacttcgcagc
tggtatccgtatgatcagcttgacgaagaaacgcagccaaccgtcaaggcgaaaaagaaa
aaagcgaagaaagtagtcgaagaagatcttgaccttgacgagtttgaagagatcgacgaa
gacgacattgatttagatgaagtcgaggaagaacttgatcttgacgccgacgattttgac
gatgaagatcttgatgaagacgacgatgatcttgagatcgaagaggatattattgatgaa
gatgatgaagatcttgatgatgaagatgaggatctcaaatag
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