Bacillus subtilis subsp. spizizenii TU-B-10: GYO_3057
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Entry
GYO_3057 CDS
T01635
Symbol
hemB
Name
(GenBank) delta-aminolevulinic acid dehydratase
KO
K01698
porphobilinogen synthase [EC:
4.2.1.24
]
Organism
bst
Bacillus subtilis subsp. spizizenii TU-B-10
Pathway
bst00860
Porphyrin metabolism
bst01100
Metabolic pathways
bst01110
Biosynthesis of secondary metabolites
bst01120
Microbial metabolism in diverse environments
bst01240
Biosynthesis of cofactors
Module
bst_M00846
Siroheme biosynthesis, glutamyl-tRNA => siroheme
bst_M00926
Heme biosynthesis, bacteria, glutamyl-tRNA => coproporphyrin III => heme
Brite
KEGG Orthology (KO) [BR:
bst00001
]
09100 Metabolism
09108 Metabolism of cofactors and vitamins
00860 Porphyrin metabolism
GYO_3057 (hemB)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
bst04147
]
GYO_3057 (hemB)
Enzymes [BR:
bst01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.24 porphobilinogen synthase
GYO_3057 (hemB)
Exosome [BR:
bst04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
GYO_3057 (hemB)
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Gene cluster
GFIT
Motif
Pfam:
ALAD
YAcAr
Motif
Other DBs
NCBI-ProteinID:
AEP87661
UniProt:
G4NYN3
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All DBs
Position
complement(2820124..2821098)
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AA seq
324 aa
AA seq
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MSQSFNRHRRLRSSKAMREMVKETRLHPSDFIYPIFVVEGLEGKKAVPSMPDVYHVSLDL
LKDEVAELVKLGIQSVIVFGIPEEKDDCGTQAYHDHGIVQKAITEIKTHFPEMVVVADTC
LCEYTDHGHCGLVKDGVILNDESLELLAQTAVSQAKAGADIIAPSNMMDGFVTVIRKALD
KEGFVNIPIMSYAVKYSSEFYGPFRDAANSTPQFGDRKTYQMDPANRMEALREAQSDVEE
GADFLIVKPSLSYMDIMRDVKNEFTLPLVAYNVSGEYSMVKAAAQNGWIKEKEIVLEILT
SMKRAGADLIITYHAKDAAKWLAE
NT seq
975 nt
NT seq
+upstream
nt +downstream
nt
atgagtcaatcatttaacagacaccgccgcctgcggtcatcaaaagcaatgagagagatg
gtaaaggaaacacgtttgcacccatcggattttatttatccaatttttgtcgttgaaggg
ctggaaggcaaaaaagctgttccgtcaatgcctgatgtttaccatgtatcattagatcta
ctgaaggatgaagtggcagagctggttaaactgggcattcaatctgtcatcgtgttcggc
atcccggaagaaaaagatgattgcggaacgcaagcgtatcatgatcacggcatcgttcaa
aaagccatcacagaaattaaaacacacttccctgagatggttgttgtcgctgatacgtgc
ttatgcgaatatacagaccacggccattgcggacttgtcaaagacggcgtcatcctcaat
gatgaatcgctggagcttttggcgcagacagctgtcagccaagcgaaagcaggtgcggat
atcattgcgccttcaaacatgatggacggatttgttacagtgatcagaaaagcgcttgat
aaagaagggttcgtcaatattccaatcatgtcttacgctgtgaaatattcaagtgagttt
tacggtccgttccgtgatgcagcaaacagcacgccgcaattcggagaccgcaaaacatat
cagatggaccctgccaaccgtatggaagcactccgcgaagcacaatcagatgtcgaggaa
ggcgcggactttttgattgtcaaaccttcactttcatatatggatatcatgcgtgacgta
aaaaatgagtttactttgccgctcgtcgcttataatgtaagcggagagtattcaatggta
aaggctgcagcgcagaacggctggatcaaagaaaaggaaattgtgttagaaattttgaca
agcatgaagcgtgcaggtgctgacctgattattacgtatcatgccaaagacgcagcgaaa
tggcttgcggagtaa
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