Bradyrhizobium symbiodeficiens: CIT39_09780
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Entry
CIT39_09780 CDS
T06284
Symbol
cobN
Name
(GenBank) cobaltochelatase subunit CobN
KO
K02230
cobaltochelatase CobN [EC:
6.6.1.2
]
Organism
bsym
Bradyrhizobium symbiodeficiens
Pathway
bsym00860
Porphyrin metabolism
bsym01100
Metabolic pathways
bsym01240
Biosynthesis of cofactors
Module
bsym_M00925
Cobalamin biosynthesis, aerobic, uroporphyrinogen III => precorrin 2 => cobyrinate a,c-diamide
Brite
KEGG Orthology (KO) [BR:
bsym00001
]
09100 Metabolism
09108 Metabolism of cofactors and vitamins
00860 Porphyrin metabolism
CIT39_09780 (cobN)
Enzymes [BR:
bsym01000
]
6. Ligases
6.6 Forming nitrogen-metal bonds
6.6.1 Forming coordination complexes
6.6.1.2 cobaltochelatase
CIT39_09780 (cobN)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CobN-Mg_chel
Motif
Other DBs
NCBI-ProteinID:
AWM06711
UniProt:
A0A2U8Q9J1
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All DBs
Position
2799433..2802681
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AA seq
1082 aa
AA seq
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MHVVFRESRGLEETATPRDIGQDPADLVVLSYSDSDLAAFAAGWRRGRDSLPTLRLANLA
ELRHPLSVDTYIERTLSQARGILVRLIGGESYWSYGLAALQQLAKDRNIVLAVLPADGRD
DTRLDAYSTLPVSTLRRLKVLCDTGGPVAAQAAIAQLALASGLYAGPVIGETAVPEMGFY
DPARGVVAAPVGGDGKPRALVTFYRSYLTAADTGPVDALIAALRERGFDACGVFVTSLKA
PGVADWLRAHLAQNPPAAIVNATAFSALGDDGTTPFDAASCPVFQVALSSARREDWVESL
RGLSPGDLAMHVVLPEVDGRLFAGVVSFKSAAQRDPDLQFSHLAHGPDEERVKAIAARVA
AWRRLAETPAAEKRLAIVLSNYPGRPHQIAHAVGLDALASVEALESDLAAAGYDVTPVHA
LGDTLLKQSLTWNVADYRAALARLPQALQDDLAQAWGAPESDPCCRNGEFHFAAVACGRS
IVAVQPERGDAVARDSDYHDLARTPRHGYVAFYLWLREQACDAVVHMGAHGTLEWLPGKS
VALSSQCWPEAVIGDLPVIYPFIVNDPGEAAQAKRRLAAVTIGHLPPPLETSAVPEGLRR
LERLLDEYSTADGLDPARRQRLIGAIRDEARAVGLEDDLGLDASAVPAEAIPRIDRFVCD
LKESQYGDGLHVFGRGACGDAERDALCAALAGQRVAPGPSGSPYRGRQDVLPTGRNLFAV
DPRAVPTPSAHAQGIKLAEELLRRHLQDHGDWPKGLVVDLWGSATMRTAGEEFAMALHLA
GLAPRWDHASGRVTGYYIVTPAELGRPRIDVTLRVSGLFRDVFSGLALLFEAASEALAAR
EEEGDENPYRHRASRVFAPRPGQYGVGLSAIPDDFTSETREAAGEAWLSASSWAFSADGE
MQPNRAGIEQRLASADGFVHVQDLPETDLLLAADYAAHEAGVAAAAAHLGAARPSLYHLD
ATRPEQPHARTLTEEISRVVRARAINPGWIAGMMRHGFRGAAEITATLEHMAAFAHLADA
VPPHLFDLYYDATLGNDDVRAFMARENPSALAAMETCFARLHDAALWQTRRNSIAAALRE
AS
NT seq
3249 nt
NT seq
+upstream
nt +downstream
nt
atgcacgtcgttttccgcgagagccgcggtctcgaggagaccgcgacgccaagggacatc
ggccaggacccggccgatctcgtggtgctctcgtattcggattccgatcttgcggcgttc
gcggccggttggcggcgcggccgcgacagcctgccgacgctgcggctcgctaatctcgcg
gaattgcgtcatccgctgtcggtcgacacctatatcgagcgcacgctgtcgcaggcgcgc
ggcattctggttcgcctgatcggcggcgagtcctattggtcctatggcctcgcggctctt
cagcaactcgccaaggatcgcaatatcgtgctggccgtgctgccggccgacggccgcgac
gacacgcggctcgatgcgtattcgacgctgccggtctcgacgctgcgccggctgaaggtg
ctctgcgacaccggtggcccggtggctgcgcaagcggcgattgcgcagcttgcgctggcc
tcgggcctctatgcagggcccgtgatcggcgagacggccgttcctgagatgggcttctac
gatccggcgcgcggtgtcgttgctgcgccggtgggcggtgacggcaagccgcgcgcgttg
gtgacgttctatcgctcctacctcacagcggcggataccggcccggtcgatgcgctgatc
gcagcgctgcgcgagcgcggctttgatgcctgcggcgtgttcgtcacctcgttgaaggct
ccaggtgtcgccgactggttgcgggcgcatctcgcgcaaaatcctccggccgcaatcgtc
aatgcgacggcgttctcagccctgggtgacgatggtacgacgccgttcgacgccgcgtca
tgtccggtgttccaggtcgcgctctcgtcggcccggcgcgaagactgggtggagtccttg
cgcggcctgtcgcccggcgatctcgcgatgcatgtggtgctgcccgaggtcgacggccgg
ctgttcgcgggcgtggtgagtttcaaatcggccgcgcagcgcgatcccgatctgcaattc
tcgcatctggcgcacgggccggatgaagagcgcgtgaaggccatcgccgcccgcgtcgcg
gcctggcggcggctcgccgagacgccggctgccgagaagcggcttgcgatcgtgctctcg
aactatccggggcgaccgcaccagatcgcgcacgccgtcgggctcgatgcgctggcttcg
gtcgaagccctggagtccgatctggcggcagccggctacgatgtcacgccggtccacgca
cttggcgacacgctgctgaagcagagcttgacctggaacgtcgcagactatcgtgctgcg
ctcgcgcggctgccgcaagcattacaggatgatctcgcgcaagcctggggtgcgccggag
agtgatccgtgttgccgcaatggcgagttccacttcgcggctgtcgcatgcggccgttcg
attgtcgcggtccagcccgagcgcggcgatgcggtcgcgcgcgatagcgattatcacgat
ctcgcccgcacgccgcgccatggctatgtcgcgttctatctctggctccgagagcaggcg
tgtgatgccgtcgtgcacatgggcgcacacgggacgctggaatggctgccgggaaaatcc
gtcgcgctctcctcacagtgctggccggaagccgtgatcggcgatctgccggtgatctat
cctttcatcgtcaacgatcccggcgaggccgcgcaggccaagcggcgcttagcggccgtc
actatcggccatctgccgccgccgctggaaacatcggctgtgcccgagggattgcggcgg
ctcgaacgcctgctcgacgaatattcgaccgccgatggtctcgatcccgcgcgccgccag
cggctgattggcgcgatccgcgacgaggcgcgcgcggtgggccttgaagacgatctcggt
ctcgatgcgtcggccgtaccggccgaagcgattccacgtatcgaccgcttcgtctgcgat
ctcaaggagagccagtacggcgacggcctgcatgtgttcggccgcggcgcctgcggcgat
gcggagcgggatgcgctatgtgccgcactcgcagggcagcgcgttgcgccggggccttcg
ggctcgccctatcgcggccgtcaggacgtgctgccgacgggacgcaatctcttcgccgtc
gacccgcgcgccgtgccgacgccgtcggcgcatgcgcagggcatcaagcttgcggaagag
ctgctgcgccgtcacttgcaggatcatggcgattggccgaaggggctcgtggtcgatctc
tggggctcggcgacgatgcgcacggccggcgaggaatttgcgatggcgctgcatctggcc
ggccttgcgccgcgctgggatcacgcctccggccgggtcaccggttactacatcgtcacc
ccggccgagcttggccgtccccgcatcgacgtgacgttgcgggtgtccggcctgttccgc
gacgtcttctcgggccttgcgctattgttcgaggccgcctccgaagcgcttgcggcgcgc
gaggaggagggcgacgagaatccgtaccgccaccgcgcctcccgcgtgttcgccccgcgt
cccggacaatacggcgttggcctctcggcgatcccggatgacttcacgtcggagacgcgc
gaggccgcaggcgaagcctggttgtcggcatcgtcatgggcgttttcggccgacggcgag
atgcagccgaatcgcgccggcatcgagcagcgcctcgcttcggccgatggctttgtccac
gttcaggacttgccggaaaccgatctgctgctcgcggccgactatgccgcacatgaagcc
ggtgtagcggcggcggctgcgcatctcggcgcggcgcgaccatcgctctatcacctcgac
gcgacgcgtcccgagcagccccacgcgcgcactttgaccgaggaaatctcgcgcgtcgtc
cgcgcacgcgcgatcaatccgggctggatcgccggcatgatgcgtcacggttttcgcggc
gccgccgagatcacggcgacgctggagcacatggccgctttcgctcatctcgcggacgcc
gtgccgccgcatctgttcgatctctactacgatgcgacgctcggcaatgacgacgtccgc
gccttcatggcgcgtgaaaatccgtccgcactcgcggcgatggaaacctgctttgcgcgc
ctgcacgatgcggcgctctggcaaacgcgccgcaattcgattgctgcagcgttgcgggag
gcctcatga
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