KEGG   Bradyrhizobium symbiodeficiens: CIT39_16725
Entry
CIT39_16725       CDS       T06284                                 
Symbol
ribD
Name
(GenBank) bifunctional diaminohydroxyphosphoribosylaminopyrimidine deaminase/5-amino-6-(5-phosphoribosylamino)uracil reductase RibD
  KO
K11752  diaminohydroxyphosphoribosylaminopyrimidine deaminase / 5-amino-6-(5-phosphoribosylamino)uracil reductase [EC:3.5.4.26 1.1.1.193]
Organism
bsym  Bradyrhizobium symbiodeficiens
Pathway
bsym00740  Riboflavin metabolism
bsym01100  Metabolic pathways
bsym01110  Biosynthesis of secondary metabolites
bsym01240  Biosynthesis of cofactors
bsym02024  Quorum sensing
Brite
KEGG Orthology (KO) [BR:bsym00001]
 09100 Metabolism
  09108 Metabolism of cofactors and vitamins
   00740 Riboflavin metabolism
    CIT39_16725 (ribD)
 09140 Cellular Processes
  09145 Cellular community - prokaryotes
   02024 Quorum sensing
    CIT39_16725 (ribD)
Enzymes [BR:bsym01000]
 1. Oxidoreductases
  1.1  Acting on the CH-OH group of donors
   1.1.1  With NAD+ or NADP+ as acceptor
    1.1.1.193  5-amino-6-(5-phosphoribosylamino)uracil reductase
     CIT39_16725 (ribD)
 3. Hydrolases
  3.5  Acting on carbon-nitrogen bonds, other than peptide bonds
   3.5.4  In cyclic amidines
    3.5.4.26  diaminohydroxyphosphoribosylaminopyrimidine deaminase
     CIT39_16725 (ribD)
SSDB
Motif
Pfam: RibD_C dCMP_cyt_deam_1 MafB19-deam Inv-AAD
Other DBs
NCBI-ProteinID: AWM07930
UniProt: A0A2U8QCL8
LinkDB
Position
complement(4229841..4230989)
AA seq 382 aa
MIFRILEDQFAQKAREAKDSDRRFMELALALGRRGQGRTWPNPAVGAVVVKDGVIVGRGW
TQAGGRPHAEPEALRRAGEAARGATLYVTLEPCSHFGKSPPCADAVIAAGIKRVVAAIED
PNPEVAGQGHARLRAAGINVELGLCAAEAAFDHAGHFRRIRDKRPHVILKLAVSPDGKIS
AAGGKPVAITGEAARNRVHLLRAQSDAILVGIGTVLADDPLLTCRLPGLEARSPVRVVLD
QNLRIPAASQLVRSARETPLWVVGSELAEAAAATRLGAAGAQIIRVPPGSVSGLDLPSVL
HALAGKGITRLMVEGGSRVAASFIAADLVDEIWLFRGAEAVGPGGVDALDALPLSKITQS
QAYKVHASETFDKDTLTIYERA
NT seq 1149 nt   +upstreamnt  +downstreamnt
atgatcttccgtatcctggaggatcagttcgcgcagaaggcccgcgaggccaaggattcc
gatcgccgcttcatggagctggcgctggcgctcggacgccgcgggcaagggcgcacctgg
ccgaaccccgcggtcggtgccgtcgtcgtcaaggacggcgtcatcgtcggccgcggctgg
acccaggcgggcgggcgtccgcatgccgagcccgaagccctgcggcgggcaggcgaagcc
gcacgcggcgccacactctacgtcacgctcgaaccttgctcccatttcggcaaatcgccg
ccctgcgccgacgcggtgatcgcggccggcatcaagcgcgtggtggcggcaatcgaggat
cccaatccggaggtcgcaggccaggggcatgcgcggctgcgcgctgccggcatcaatgtg
gaattgggcctgtgcgcggcggaagccgcattcgaccatgccgggcatttccgccgcatc
cgggacaagcgcccgcatgtgatcctgaagctcgcagtctcgcccgatggcaagatcagc
gccgccggcggcaagccggtcgcgatcaccggggaggcggcgcgcaaccgcgtgcatctg
ctgcgcgcgcagagcgatgccatcctggtcggtatcggaacggtgctggcggacgatccg
cttctcacctgccgcctgccgggcctggaagcgcgttcgccggtgcgagtggtcctcgac
cagaatctgcgcattccggccgcaagccagctggtgcgctccgcgcgcgagacgccgctc
tgggtggtcggttctgaactcgccgaagccgccgccgcgactcgtcttggcgctgccggc
gcccagatcatccgcgtgccgcccgggagcgtttccgggctcgatcttccgtccgtgctc
catgctctggccgggaagggcatcacgcggctgatggtcgagggcggcagccgggtagcg
gcatcgttcattgccgccgacctcgtcgacgaaatctggctgttccgcggagcggaagcg
gtggggcccgggggagtcgacgcgctcgatgcattgcccctgtcgaaaatcacgcagtcg
caggcctacaaggttcatgctagcgaaacattcgacaaggatactctcaccatctacgag
cgcgcgtaa

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