Bradyrhizobium symbiodeficiens: CIT39_20680
Help
Entry
CIT39_20680 CDS
T06284
Symbol
garD
Name
(GenBank) galactarate dehydratase
KO
K01708
galactarate dehydratase [EC:
4.2.1.42
]
Organism
bsym
Bradyrhizobium symbiodeficiens
Pathway
bsym00053
Ascorbate and aldarate metabolism
bsym01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
bsym00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00053 Ascorbate and aldarate metabolism
CIT39_20680 (garD)
Enzymes [BR:
bsym01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.42 galactarate dehydratase
CIT39_20680 (garD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
GD_AH_C
GD_AH_second
SAF
Motif
Other DBs
NCBI-ProteinID:
AWM08616
UniProt:
A0A2U8QEJ6
LinkDB
All DBs
Position
4998877..5000418
Genome browser
AA seq
513 aa
AA seq
DB search
MDQDVAAKEQPRYIKLNERDNVAIVVNDFGLPAGSRFASGLTLRAFVPQGHKTALVDIAQ
DQPIIRYGEIIGYALSPILAGEWVDEARIRMPEAPDLDKLEISTAVPAPLPPLDGFTFEG
YRNPDGSVGTKNILGISSSVQCVKGTMEYAVKRIRAELLPKYPNVDDVVPLTHAYGCGVA
INAPDAVVPIRTLQNIAINPNFGGEILVISLGCEKLAPERLVPEGVSDAIVRMQDEAFDG
FGAIVDAIMTQAEARLKILNKRTRETCPASDLVIGLQCGGSDAFSGVTANPAVGFAADLL
VRAGATVMFSEVTEVRDAIQLLTRRAINQDVGRALVREMAWYDSYLARGGADRSANTTPG
NKKGGLANIVEKSLGSIVKSGSSAITGVLSPGEKATQKGMLFAATPASDFICGTLQLASG
MTLQVFTTGRGTPYGLAAAPVIKVATRTELARRWKDLIDFDAGGIATGEKTIEETGWDLF
RLILDVASGRTKPWSDRWGIHNDLTLFNPAPVT
NT seq
1542 nt
NT seq
+upstream
nt +downstream
nt
atggaccaggacgtcgcagcgaaagagcagccccgctacatcaagctcaacgagcgcgac
aatgtcgcgatcgtggtcaatgatttcgggcttcccgccggctcgcgctttgccagcgga
ctgacgctgcgcgccttcgtgccgcaggggcacaagacggcgctggtcgacatcgcgcag
gatcagccgatcatccgctacggcgagatcatcggctacgcgctctccccgatcctggcc
ggcgaatgggtcgacgaggcccgcatccgcatgccggaggcccctgacctcgacaagctc
gagatctcgaccgcggtccccgcgccgctgccgccgctcgacggctttactttcgaaggc
tatcgcaatcctgacggatcggtcggcacgaaaaacattctgggcatctcctcctcggtg
caatgtgtcaagggcacgatggaatatgcggtgaagcgcatccgcgccgagctgttgccc
aaatatcccaacgtcgacgacgtggtgccgctcacccatgcctacggctgcggcgtcgcc
atcaatgcccccgacgcggtcgtgccgatccgcacgctgcagaacatcgcgatcaatccg
aatttcggcggcgagattctggtcatcagcctcggatgcgaaaagctcgcacccgagcgc
ctggtgccggaaggcgtcagcgacgccatcgtgcgcatgcaggacgaagccttcgacggc
tttggcgccatcgtcgatgcgatcatgacgcaggcggaagcccgcctgaaaatcctcaac
aagcgcacccgcgagacctgcccggcttccgatctcgtcatcggcctgcaatgcggcggc
agcgacgccttctccggcgtcaccgccaatcccgccgtcggctttgccgccgacctcctg
gtgcgcgccggcgccaccgtgatgttctcggaagtgaccgaggtgcgcgacgccatccag
ctgctcacgcgacgcgcgatcaatcaggatgtcggccgcgcgctggtgcgcgagatggcc
tggtatgattcctacctcgcgcgcggcggtgccgaccgcagcgccaacaccacgcccggc
aacaagaagggcggcctcgccaacatcgtcgagaagtcgctgggctcgatcgtcaagtcc
ggctcctccgccatcaccggcgtgctctcgcccggcgagaaggcgacgcagaagggcatg
ctgttcgcggcaacgccagcctcggacttcatttgcggcacgctccagctcgcctccggc
atgacgctgcaggtgttcaccaccggccgcggcacgccctacggcctcgcggcggcgccc
gtgatcaaggtcgcgacccgcaccgagctcgcccgccgctggaaggacctgatcgacttc
gacgcgggcggcatcgccaccggcgaaaagaccatcgaggagaccggctgggatctgttc
cgcctcatcctcgatgtcgcctccggccgcaccaagccatggtcggaccgctggggcatc
cacaacgatctcacgctgttcaatccggcgcccgtgacctaa
DBGET
integrated database retrieval system