Bradyrhizobium symbiodeficiens: CIT39_20910
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Entry
CIT39_20910 CDS
T06284
Symbol
rfaD
Name
(GenBank) ADP-glyceromanno-heptose 6-epimerase
KO
K03274
ADP-L-glycero-D-manno-heptose 6-epimerase [EC:
5.1.3.20
]
Organism
bsym
Bradyrhizobium symbiodeficiens
Pathway
bsym00540
Lipopolysaccharide biosynthesis
bsym01100
Metabolic pathways
bsym01250
Biosynthesis of nucleotide sugars
Brite
KEGG Orthology (KO) [BR:
bsym00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00540 Lipopolysaccharide biosynthesis
CIT39_20910 (rfaD)
09180 Brite Hierarchies
09181 Protein families: metabolism
01005 Lipopolysaccharide biosynthesis proteins [BR:
bsym01005
]
CIT39_20910 (rfaD)
Enzymes [BR:
bsym01000
]
5. Isomerases
5.1 Racemases and epimerases
5.1.3 Acting on carbohydrates and derivatives
5.1.3.20 ADP-glyceromanno-heptose 6-epimerase
CIT39_20910 (rfaD)
Lipopolysaccharide biosynthesis proteins [BR:
bsym01005
]
Core region
CIT39_20910 (rfaD)
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GFIT
Motif
Pfam:
Epimerase
GDP_Man_Dehyd
RmlD_sub_bind
3Beta_HSD
Polysacc_synt_2
NAD_binding_4
Motif
Other DBs
NCBI-ProteinID:
AWM08660
UniProt:
A0A2U8QEP2
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Position
complement(5054099..5055079)
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AA seq
326 aa
AA seq
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MLLVTGGAGFIGSNAVAALNDAGRSDVVVCDFLGNEGKWRNLAKRQLVDIVPPAELMDWL
KGRKLDAVIHLGAISATTATDGDLVFETNFRLSMRLLDWCAASAVPFIYASSAATYGDGE
AGFDDDGSLPALKKLRPMNLYGWSKHMFDLAVAERAARGEKLPPQWAGLKFFNVFGPNEY
HKGSMMSVLARRFDDVKAGRVVQLFKSHREGIADGDQRRDFIYVDDVVRVVMWLLATPSV
SGLFNVGTGKARSFRDLMLAAYAALGTRPNIEYIDMPEQIRGAYQYFTQSEVDRLHRAGY
NGGFTTLEDAVKAYVGDYLDRPDRFR
NT seq
981 nt
NT seq
+upstream
nt +downstream
nt
atgttgctggtgaccggcggggccggttttatcgggtcgaatgccgtggccgcgctcaat
gacgccggccgcagtgacgtcgtggtctgcgatttcctcggtaacgaggggaagtggcgg
aacctcgccaagcgccagcttgtggatatcgtcccgccggccgagctgatggactggctg
aagggccgcaagctggacgccgtgatccatctcggagcgatttccgcgaccactgcgacc
gacggcgacctcgtgttcgagaccaatttccgcctgtcgatgcgccttctcgattggtgc
gcggcgagcgcggtgcccttcatctatgcttcctcggcggcgacctatggcgacggcgag
gcgggttttgacgacgacggctcgctgccggcactgaagaaactgcggccgatgaatctc
tacggctggagcaagcacatgttcgatctcgcggtcgccgaacgtgccgcgcgtggcgag
aagctcccgccgcaatgggctggcctgaaattcttcaacgtgttcggccccaacgaatat
cacaagggctcgatgatgagcgtgctggcgcggcgcttcgacgacgtcaaggcaggccgc
gtcgtgcaattgttcaagtcgcaccgtgagggcatcgccgacggcgatcagcgccgcgat
ttcatctatgtcgacgacgtcgtgcgcgtcgtgatgtggctgcttgcgacaccatcggtg
tccggactcttcaacgtcggaaccggcaaggcgcgcagcttcagggatctgatgttggcg
gcctatgcggcgctcggcaccaggccaaacatcgaatatatcgacatgcccgagcagatc
cgcggggcctaccagtacttcacccagagcgaggtcgatcgcctccaccgcgccggctat
aacggcggcttcacgacgctcgaggatgcggtgaaggcctatgtcggggattacctcgac
cggcccgaccgcttccgctga
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