Bos taurus (cow): 536316
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Entry
536316 CDS
T01008
Symbol
POLR1A
Name
(RefSeq) DNA-directed RNA polymerase I subunit RPA1
KO
K02999
DNA-directed RNA polymerase I subunit RPA1 [EC:
2.7.7.6
]
Organism
bta
Bos taurus (cow)
Pathway
bta03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
bta00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
536316 (POLR1A)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
bta03021
]
536316 (POLR1A)
Enzymes [BR:
bta01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
536316 (POLR1A)
Transcription machinery [BR:
bta03021
]
Eukaryotic type
RNA polymerase I system
RNA polymerase I
Core subunits
536316 (POLR1A)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb1_5
RNA_pol_Rpb1_2
RNA_pol_Rpb1_3
RNA_pol_Rpb1_4
RNA_pol_Rpb1_1
Motif
Other DBs
NCBI-GeneID:
536316
NCBI-ProteinID:
NP_001179805
BGD-bta:
BT28419
Ensembl:
ENSBTAG00000006481
VGNC:
33131
UniProt:
E1BIX2
LinkDB
All DBs
Position
11:48759421..48843648
Genome browser
AA seq
1717 aa
AA seq
DB search
MLGSKNMPWRRLQGISFGMYSAEELKKLSVKSITNPRYLDSLGNPSVNGLYDLALGPADS
KEVCSTCVQDFTNCSGHLGHIDLPLTVYNPLLFDKLYLLLRGSCLNCHMLTCPRAVVHLL
LCQLRVLEVGALQAVYELERILYRFLEENADPTACEIQEELEQYTIKILQNNLPGSQGAQ
VKNVCESKSKLISVFWKVHMTAKRCPHCKTGRSVVRKEHNSKLTITYPAMVHRRADQKDS
EPQGIEEAQMGKRGYLTPSSAQEHLIALWKNEGFFLNYLFLGLEDVGMESRFNPSMFFLD
FLVVPPSRYRPVNRLGDQMFTNGQTVNLQAVMKDVVLIRKLLALMAQEQELPSEVAAPTT
EEEKDSWMAMDRSFLSQLPGQSLTDRLYNIWIRLQSHVNIVFDSEMDKLMMEKYPGIRQI
LEKKDGLFRKHMMGKRVDYAARSVICPDMYISTNEIGIPMVFATKLTYPQPVTPWNVQEL
RQAVINGPNMHPGASMVINEDGSRTALSASDLTQREAVAKQLLTPATGAPKPQGTKIVCR
HVKNGDILLLNRQPTLHRPSIQAHRARVLPEEKVLRLHYANCKAYNADFDGDEMNAHFPQ
SELGRAEAYVLACTDQQYLVPKDGQPLAGLIQDHMVSGANMTIRGCFFNREQYMELVFRG
LTDKVGRVKLFPPAILKPFPLWTGKQVVSTLLINIIPEDHIPLNLSGKAKIGGKAWVKES
PRLVPGFNPDSMCESQVIIRAGELLCGVLDKAHYGSSAYGLVHCCYEIYGGETSGRVLTC
LARLFTAYLQLYRGFTLGVEDILVKPKADVRRHGIIEDSTHCGPRAVRAALNLPEAVSCD
EVQGKWQDAHLSKDQRDFNMIDLKFKEEVNHYSNEINKACMPFGLHRQFPENNLQMMVQS
GAKGSTVNTMQISCLLGQIELEGRRPPLMASGKSLPCFEPYEFTPRAGGFVTGRFLTGIK
PPEFFFHCMAGREGLVDTAVKTSRSGYLQRCIIKHLEGLVVQYDLTVRDSDGSVVQFLYG
EDGLDIPKTQFLQPKQFPFLTSNYEVIMKSKHLHEVLSRADPQKALRHFRAIKKWHSKHS
NTLLRKGAFLNYSQKIQAAVKALNLEGTNQNGRSPETYQMLRMWAELDEQSRRKYQKKAA
PCPDPSLSVWRPDIYFASVSETFEKKMDDYSCEWAAQAERSYEKSGLSLDSLRTLLQLKW
QRSLCDPGEAVGLLAAQSIGEPSTQMTLNTFHFAGRGEMNVTLGIPRLREILMVASSNIK
TPMMSVPVFNTKKALKKVKSLKKQLTRVCLGEVLEKIDVQESFRIGEKQNKFRVYQLRFQ
FLPHAYYQQEKCTRPEDILHFMETRFFKILMEAIRKKNSKASAFRNVNTRKATQRDLDNA
GESERNRGEQEGDEEEEGHIVDAEAEEGDADASDAKRKEKQEEEVDYDSEEEEEKEEEEK
EEEDIQEEGTGLKEGVQQEQEEGGWAPEESSLPGAPLTQPQKRARSREPQGAEAVERRAQ
AVRECHPFIEDYQYDTQGSLWCQVTLKLPLMKVNFDMSSLVASLAQGAIIYATKGITRCL
LNETINSKNEKELVLNTEGINLPELFKYAEVLDLRRLYSNDIHAMASTYGIEAALRVIEK
EIKDVFAVYGIAVDPRHLSLVADYMCFEGVYKPLNRFGIRSNSSPLQQMTFETSFQFLKQ
ATLMGSHDELRSPSACLVVGKVVKGGTGLFELKQPLR
NT seq
5154 nt
NT seq
+upstream
nt +downstream
nt
atgttgggctcaaagaacatgccctggcggcggctgcagggcatttccttcgggatgtat
tcggccgaagaactcaagaaattaagcgtgaagtccattacgaaccctcggtacctggac
agcctggggaacccctcggtaaatggcctgtatgatttagctctgggccccgctgactcc
aaagaggtgtgctccacctgcgtgcaggacttcaccaactgctctgggcacttgggccac
atcgacctcccgctcaccgtgtacaaccctctcctcttcgataaactctaccttttgctc
cggggctcctgtttaaactgtcacatgctgacctgcccccgggctgtggttcacctctta
ctgtgccagctgagagtcctggaagttggggccctgcaagcagtgtatgagctggagaga
attctctacaggtttctggaagaaaatgctgatcctactgcctgtgaaattcaggaagag
ctagagcaatatacaatcaaaatcctgcagaacaacctcccaggatcccagggtgcacaa
gtgaaaaatgtctgtgagagcaagagcaaactcatctctgtcttctggaaggtacatatg
actgctaagagatgtccccactgcaaaactgggcggtcagtggtccggaaggagcacaat
agcaaactgaccatcacgtacccggccatggtgcacaggagagctgaccagaaggacagt
gagccccagggaattgaggaagctcagatgggaaaacgaggatacctgacaccctccagt
gcgcaagaacatctcatagctctttggaaaaatgaagggttctttctgaattaccttttt
ttgggactggaagatgttggcatggagtccaggttcaaccccagtatgttctttctggat
ttcttggtggtaccaccctcaaggtatcgccctgtcaaccgccttggggaccagatgttc
accaacgggcagacggtgaacttgcaggctgtcatgaaggacgtggttctgatccgaaag
cttctggcactgatggcccaagaacaggagctgccaagtgaggtggcagcacccactaca
gaagaggaaaaagactcctggatggctatggaccgatcttttttgagtcagcttccaggc
cagtccctcacagacagactttacaacatttggattcgccttcagagccacgttaatatt
gtgtttgatagcgagatggacaaattaatgatggaaaagtaccccggcattagacagatc
ctggagaagaaggatggtttgttccgaaagcacatgatggggaagcgcgtagactacgca
gcccgctcggtcatctgcccggacatgtacatcagtaccaacgaaattggaattcccatg
gtgtttgccacaaagctgacctaccctcaaccagtcaccccctggaacgttcaggaactg
aggcaggcggtcatcaacggccccaacatgcaccctggagcctctatggtcatcaacgag
gatggcagtcgcacagccctgagcgcctcggacctcacgcagcgggaggccgtggccaaa
cagctcctgacaccagctacgggggcccctaagccccaggggacaaaaattgtgtgccgg
catgtgaagaacggggacattctcctcctgaaccggcagcccaccctgcacaggccctcc
atccaggcgcatcgcgcccgcgtcctccccgaggagaaagtcctgcggctccactatgcc
aactgcaaggcctacaacgccgacttcgatggagatgagatgaacgcccactttccccag
agtgaactgggccgggccgaggcctacgtcctggcctgcaccgatcagcagtaccttgtt
cccaaggatggccagccattggcggggctgatccaagatcacatggtttcaggagcaaac
atgaccattcgaggctgctttttcaaccgggagcagtatatggagctggtgttccgagga
ctcacagacaaagtggggcgtgtgaagctctttcctcctgccatcctgaagccctttcct
ctgtggacaggaaagcaggtcgtgtccacattgctcatcaacataatcccagaggaccat
atccccctgaacttgtcaggaaaggcgaagatcggtggaaaggcctgggtgaaggagtct
cctcggctcgttcccggctttaaccccgactccatgtgcgagtcccaggtgatcatcaga
gcaggggaactgctgtgcggggtgctggacaaggcgcactacggaagctccgcctacggc
ctggtccactgctgctacgagatctacggtggggagaccagcggcagggttctcacctgc
ctggcccgcctcttcaccgcctacctgcagctctacagaggcttcaccttgggagtagaa
gacattttggtcaagccgaaggcggatgtcaggagacatgggatcattgaagactccacc
cactgtgggccccgggccgtcagggctgcgttaaacctgccagaggcagtgtcatgtgat
gaagtccaagggaagtggcaggatgcccatctgagtaaagatcagagggattttaacatg
attgacttgaagttcaaggaggaagtgaaccattacagcaatgaaattaacaaggcatgc
atgcccttcggcctacacagacagttcccagagaacaatctgcagatgatggtacagtct
ggagccaaaggttcaacagtgaacaccatgcagatttcgtgcctgctgggccagatcgaa
ttggaaggtcggagacccccgctcatggcatctggcaagtcgttgccctgcttcgagcct
tatgaattcacccccagggctggcggcttcgtgactggcaggttcctcactggcatcaag
cctccggagttcttcttccactgcatggccggccgagagggtctggtggacactgctgtg
aagaccagccgttccggatacctccagaggtgcatcatcaaacacctggaggggctggtt
gtccaatacgacctgacagtccgcgacagtgatggcagcgtggtgcagttcctgtacggg
gaggacggcctggacatccccaagacacagttcctgcagcctaagcagttccccttcctc
accagcaactatgaggtaataatgaaatcaaagcatctccatgaagttttatccagagcg
gatccccagaaagctctccgtcatttcagagccatcaaaaaatggcacagcaagcattcc
aacaccctcctgaggaaaggcgccttcttgaattactcccagaaaattcaggcagctgtg
aaagccttgaaccttgagggcacaaaccagaacggccgcagccccgagacttaccagatg
ctgaggatgtgggctgagttagacgaacaaagccggaggaagtaccagaagaaggcggct
ccttgtcccgaccccagtctgtctgtctggcgcccagacatctacttcgcatccgtgtca
gaaacatttgaaaagaagatggacgactacagctgcgagtgggcagctcaggcagagcgg
agttacgagaaatcggggctttctctcgacagtttgaggactctgctgcagctcaagtgg
cagcgctctctatgcgacccgggtgaggccgtgggcctgctggccgcccagagcatcggg
gagccctccacacagatgacgctcaacaccttccactttgccggcagaggcgagatgaat
gtcaccctgggcattccgaggttgcgggagatcctcatggtggccagttccaacatcaag
acgccgatgatgagtgtacctgtgttcaataccaagaaagcactgaagaaagtgaaaagc
ctgaagaagcaactcaccagagtgtgtctcggggaggtgttggagaaaattgatgtccag
gagtccttccgtataggggagaaacagaacaagttccgggtataccagctgcggtttcag
ttcctgccgcatgcgtactaccagcaggagaagtgcacgaggcccgaggacatcttacac
ttcatggaaaccagattctttaaaattctgatggaagccatcaggaagaagaacagcaaa
gcatcagctttcagaaatgtgaacacgcggaaagccacccagcgggatctagacaatgct
ggcgagtccgagaggaatcggggagagcaggagggcgacgaggaagaggaggggcacatt
gtggacgctgaagctgaggagggagatgctgatgcctcagatgccaaacgcaaggaaaaa
caagaggaggaggtcgactatgacagcgaggaggaggaggagaaggaggaagaggagaag
gaggaagaggacattcaggaggaagggaccggcctcaaagaaggcgttcagcaggagcag
gaggaaggcggctgggcccccgaagagagctcgctccccggtgcccccctgacgcagcca
cagaagcgcgcccgaagccgggagccccagggggccgaggcggtggagcgccgggcacag
gcggtgcgcgagtgccatccgttcatagaggactaccagtatgacacacagggcagcctg
tggtgccaggtgacgctgaagctccctctcatgaaagtcaactttgacatgagctccctg
gtagcgtccttggcccaaggagccatcatctatgcaaccaagggtatcacaaggtgcctc
ctgaatgagaccatcaacagtaagaatgagaaggagcttgtcttaaacacagaaggcatc
aacctcccggagctgttcaagtacgccgaggtcctagatctccgccgtctctattccaat
gacatccatgccatggccagcacgtacggcatcgaggccgcactgcgagtgattgaaaag
gagatcaaggacgtgtttgccgtatacggcatcgccgttgacccccgccacctctcgctg
gtggctgactacatgtgcttcgagggtgtttacaagccactgaaccgctttgggatccgg
tcaaactcctcgccactgcagcagatgacgtttgagaccagcttccagtttctgaagcag
gccaccctcatgggatcccatgacgaactgaggtccccatcagcctgcctcgtggtcggg
aaggtcgtcaagggtgggaccggcctcttcgagctcaagcagccactaagatag
DBGET
integrated database retrieval system
