Bemisia tabaci (sweet potato whitefly): 109030068
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Entry
109030068 CDS
T06019
Name
(RefSeq) DNA-directed RNA polymerase II subunit RPB1
KO
K03006
DNA-directed RNA polymerase II subunit RPB1 [EC:
2.7.7.6
]
Organism
btab
Bemisia tabaci (sweet potato whitefly)
Pathway
btab03020
RNA polymerase
btab03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
btab00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
109030068
09124 Replication and repair
03420 Nucleotide excision repair
109030068
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
btab03021
]
109030068
03400 DNA repair and recombination proteins [BR:
btab03400
]
109030068
Enzymes [BR:
btab01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
109030068
Transcription machinery [BR:
btab03021
]
Eukaryotic type
RNA polymerase II system
RNA polymerase II
Core subunits
109030068
DNA repair and recombination proteins [BR:
btab03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase II complex
109030068
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNA_pol_Rpb1_1
RNA_pol_Rpb1_5
RNA_pol_Rpb1_2
RNA_pol_Rpb1_6
RNA_pol_Rpb1_7
RNA_pol_Rpb1_3
RNA_pol_Rpb1_4
RNA_pol_Rpb1_R
Motif
Other DBs
NCBI-GeneID:
109030068
NCBI-ProteinID:
XP_018896376
UniProt:
A0A9P0AIS0
LinkDB
All DBs
Position
Unknown
AA seq
1893 aa
AA seq
DB search
MATSDSKAPLRSVKRVQFGILSPDEIRRMSVTEGGIQYPETMEGGRPKLGGLMDPRQGVV
DRMSRCQTCAGNMSECPGHFGHIDLAKPVLHVGFITKTIKVLRCVCFYCSKLLVSPSHPK
VKEIVMKSKGQPRKRLAFIYDLCKGKNICEGGDEIDIAKENPDDPSREQPKKQGHGGCGR
YQPNIRRAGLDLTAEWKHVNEDSQEKKIPLTAERVWEILKHIIDEECLILGMDPRYARPD
WMIVTSLPVPPLSVRPAVVMHGSARNQDDLTHKLSDIIKCNNELIRNEKAGASAHVISEN
IKMLQFHVATLVDNDMPGLPRAMQKSGKPLKAIKSRLKGKEGRIRGNLMGKRVDFSARTV
ITPDPNLRIDQVGVPRSIAQNLTFPEIVTPFNFDKMKELVHRGNSQYPGAKYIVRDNGER
IDLRFHPKSSDLHLQCGYKVERHIRDGDLVIFNRQPTLHKMSMMGHRVKVLPWSTFRMNL
SCTSPYNADFDGDEMNLHVPQSMETRAEVENLHVTPRQIITPQANKPVMGIVQDTLTAVR
KMTKRDVFLDKDQMMNILMHLPIWDGKMPQPCILKPRPLWTGKQVFSLIIPGNVNMIRTH
STHPDDEDNGPYKWISPGDTKVVVEHGELVMGILCKKTLGTSAGSLLHICMLELGHEVCG
RFYGNIQTVINNWLLLEGHSIGIGDTIADPQTYVEIQRAIKKAKADVIEVIQKAHNMDLE
PTPGNTLRQTFENQVNRILNDARDKTGGSAKKSLTEYNNLKAMVVSGSKGSNINISQVIA
CVGQQNVEGKRIPFGFRKRTLPHFIKDDYGPESRGFVENSYLAGLTPSEFYFHAMGGREG
LIDTAVKTAETGYIQRRLIKAMESVMVNYDGTVRNSVGQLIQLRYGEDGLCGEAVEFQKI
ATVDLSHKAFEDGFKFDPSNERHLRRIFNEDILKELMGSGEVISELEKEWEQLSRDREAL
RQIFPSGETKVVLPCNLKRMIWNVQKIFHINQRAPTDLSPLKVIQGVKELLEKCIIVAGE
DQLSKQANENATLLFQCLVRSTLCTKLVSEKFRLSSEAFEWLVGEIENRFQQAQCSPGEM
VGALAAQSLGEPATQMTLNTFHFAGVSSKNVTLGVPRLKEIINISKKPKAPSLTVFLTGA
AARDAEKAKNVLCRLEHTTLRKVTANTAIYYDPDPQNTVIREDQEFVNVYYEMPDFDPTR
ISPWLLRIELDRKRMTDKKLTMEAISEKINAGFGDDLNCIFNDDNAEKLVLRIRIMNSDD
NKLQDEEDTVDKMEDDMFLRCIEANMLSDMTLQGIEAISKVYMHLPQTDSKKRIVVTETG
EFKAIADWLLETDGTSLMKVLSERDVDPVRTFSNDICEIFAVLGIEAVRKSVEKEMNTVL
QFYGLYVNYRHLALLCDVMTAKGHLMAITRHGINRQDTGALMRCSFEETVDVLMDAASHA
EVDPMRGVSENIIMGQLPRMGTGCFDLLLDAEKCKAGIEIPMNIGAGMMSGAGMFFGSMA
TPSMSPQMTPWNVGATPGYGSVWSPAVGSGMTPGGPNFSPSGSSDASGMSPGYAWSPTPG
SPGSPGPAMSPFIPSPASGMSQSYSPSSPAYAPTSPSMTPTSPNYSPTSPSYSPTSPNYS
PTSPSYSPTSPSYSPTSPSYSPTSPSYSASPSYSPTSPSYSPTSPSYSPTSPSYSPTSPS
YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYTPTSPSYSPSSPSYSLS
SPQYSPSSPASPSYSPTSPKYSPTSPSYSPASPSFVSSPQYTPVSPQYSPTSPTYSPTSP
SYSPTSPSYSPSSPQHSPGGASHYSPSSPKYSPTSPTYSPTSPQYSPSSSKYSPTSPTYT
PTSPNYSPTSPTYSPSVPGYSPTSPTYSPTSPN
NT seq
5682 nt
NT seq
+upstream
nt +downstream
nt
atggcgacctcagattctaaagctccgttacggagcgttaaaagagtgcaatttgggatc
ttatcgccagatgaaatccggcgtatgtctgtcacagaagggggcatccagtaccccgaa
accatggagggtggaagaccaaaactgggcgggctgatggatccgcgacaaggtgtcgta
gatcgaatgtccaggtgtcaaacttgtgccggtaacatgtcagaatgtccaggtcacttt
ggtcacatcgacctagcgaaacctgtgctacatgtaggatttatcaccaaaactatcaaa
gtccttcgatgcgtttgtttctattgctctaaacttcttgttagtcctagtcatccaaaa
gttaaagaaattgtaatgaaatccaaaggtcagcctcgcaaaaggttagctttcatttat
gacctgtgtaaaggcaaaaatatctgtgaaggtggtgatgaaattgatatagcaaaagaa
aatcctgacgatccatcaagagagcagccaaagaaacaaggtcacggtggttgtggtcgc
taccagccaaatatccgacgagcagggctagatttgactgctgagtggaaacatgtgaat
gaagattcacaagaaaagaagatcccattaactgcagaacgagtgtgggagattttgaaa
cacatcatcgatgaagagtgtctaattttgggtatggatcctcgctatgctcgcccagat
tggatgatcgtcacaagtctccctgtgcctcctttgtcagttagaccagctgttgttatg
catggctcagccagaaatcaggatgatttgactcacaagctgtcagacatcatcaaatgc
aacaatgagcttattcgaaacgaaaaagctggagcctcagctcatgtcatcagtgaaaat
ataaaaatgctccagttccatgtggcaactctagtagataatgacatgcctggtctccca
agagccatgcagaagtcaggaaaacctctcaaagccattaagtcacgtctgaaaggaaag
gaaggtcggattcgaggaaacttgatggggaagcgtgtggatttctccgcaagaactgtc
atcacaccagatcccaatctgcgtatcgatcaagtcggtgttcctaggtctatagctcaa
aatcttacattccccgaaatagtcacacctttcaattttgataaaatgaaagagttagtc
cacagaggaaattcccagtaccctggagccaaatatattgtgcgagacaatggtgagcgt
atcgatttgaggttccacccgaaatcatcagatttgcatttacagtgcggctacaaagtc
gaaaggcatatccgcgatggtgatctcgttattttcaaccggcagcccactctccacaaa
atgagtatgatgggtcaccgtgtcaaagtactaccatggtctactttccgtatgaacttg
agttgtacgtcaccatacaacgctgatttcgacggtgatgaaatgaacctgcatgtacct
caatccatggaaacgagggcagaggtggaaaacctccacgtcaccccgcgacaaattatc
acgccgcaagccaacaaacctgtcatgggtattgtgcaggatacgctcactgcagttagg
aaaatgacaaaacgtgatgtgttcctagacaaagatcaaatgatgaatatccttatgcat
ttaccaatttgggacggaaaaatgccccaaccttgcattctgaagccgaggcctctttgg
acgggaaagcaggtcttctcactgatcattcccggtaacgtaaatatgattcgaactcac
tcaacacatcctgatgatgaagataacggaccttataaatggatctcacctggagacaca
aaagtagttgtagaacacggtgaattagtcatgggtatcctgtgcaagaaaacactcggt
acttccgccggttcattgcttcacatttgtatgttggaactgggtcacgaagtttgcggt
cggttctacggtaacattcagactgtcatcaacaactggttgctgctggaaggtcactcc
attggtatcggagacacaattgccgatcctcaaacttacgttgaaatccagagagccatc
aagaaagccaaagctgatgtgatagaagtcattcaaaaagcccacaacatggatctcgag
ccgacacccggtaacactttgaggcagacattcgaaaatcaagtaaacaggatcttgaac
gatgctcgtgacaaaactggaggttctgccaagaaatcattgactgagtacaacaatctc
aaagctatggtcgtctcaggttccaaaggatcaaatattaacatttcccaggttattgct
tgtgtaggtcagcagaacgttgaaggtaaacgtattcctttcggtttccgtaaaagaacg
ctgcctcacttcatcaaagacgattatggtcctgagtcaagagggttcgtcgaaaactca
tatcttgctggtctgaccccatctgagttctatttccacgctatgggaggtcgtgaaggt
cttattgatactgctgtcaaaactgctgagactggttacatccagcgtcgtctgatcaag
gctatggagtctgtcatggtaaattatgacggaacagtccgtaattcagttggacaattg
attcagttacgttatggagaagacggactttgcggagaagcagtcgagtttcagaagata
gcaacagttgacttgtcacacaaagcgtttgaggatggcttcaaatttgacccatctaat
gaaaggcacttgcgaagaatatttaatgaagacatcttgaaagaactcatgggcagcggt
gaagtcatctcagaattagaaaaagaatgggaacagctaagccgagatcgtgaagctctg
cgacaaatcttcccctctggagaaacgaaagtcgtactcccgtgcaacttgaaacgtatg
atttggaatgtacagaaaattttccacatcaaccaacgtgcacctacagatctcagtcct
ttgaaagttattcaaggtgtgaaagaattattagagaaatgtatcatagtggctggagaa
gatcagctgagtaagcaagccaatgaaaacgctaccctgctcttccagtgtttagtccgg
tcaaccttatgcacaaagttagtgtcagagaaattccgactttcatcagaagccttcgaa
tggttggtgggagaaatcgaaaacagattccaacaagctcagtgttcccctggtgaaatg
gttggagctttggctgctcaaagtttaggtgagcctgccactcagatgacactgaacact
ttccattttgctggtgtatcttcaaagaacgtaacccttggtgtacccaggctcaaggaa
attatcaacatcagtaaaaaaccaaaggctccctctttgactgttttcttgactggagct
gcagcccgtgatgccgaaaaagccaaaaatgttctctgtcgccttgaacacaccacgcta
agaaaagtgactgccaacacagcgatctactatgatccagaccctcagaatactgtcatt
cgtgaggatcaagaattcgtcaatgtctattatgaaatgcctgactttgaccccactcga
atttctccctggttgttgcgtattgagctggaccgaaagagaatgactgataagaaactg
acgatggaagcaatttccgaaaaaatcaacgcaggttttggtgatgatctcaattgtatt
ttcaatgatgacaacgcagagaaattagtgctgcgaattcgtatcatgaacagtgatgac
aacaaacttcaggatgaagaagacacagtcgacaaaatggaagatgatatgttcttgcgg
tgcatagaagcaaacatgttgtctgacatgacacttcagggtatcgaagcaatcagtaaa
gtgtacatgcacttgccgcaaacagattcaaagaaaagaattgttgtcacggaaacagga
gaattcaaagccattgcagattggttgttggaaactgatggtaccagtctcatgaaagtc
ctcagtgagcgtgatgttgatcctgttcgaactttctcaaacgacatctgtgaaatcttc
gctgtacttggtatcgaggctgtgcgaaagtccgtagaaaaggaaatgaacactgtcctg
cagttctatggtctttacgtgaactatcgtcatcttgccttgttgtgtgacgtcatgaca
gccaaaggtcacttgatggccatcacccgtcacggtattaacagacaagatactggagct
cttatgaggtgttcttttgaagaaacagttgatgtcttgatggacgctgcatctcacgct
gaagtagaccccatgagaggtgtgtccgagaacatcatcatgggccagcttccaagaatg
ggaacaggatgtttcgatttgctcctcgacgctgagaagtgtaaggctggtattgagatt
ccaatgaacattggtgccggcatgatgtcaggagcaggcatgttctttggatcaatggcc
acgccgtcaatgagtcctcagatgaccccatggaacgttggcgccacacctggctacggc
agtgtatggtcaccagccgtcggcagtggtatgactcctggcggtcccaacttctcaccc
agtggttcaagcgatgccagtggaatgtcacctggttacgcatggagtccaacccctggt
agtcctggctctcccggtccagcgatgagtccgttcattcccagccctgcgagtggaatg
tcacagagctactcaccctctagcccagcgtacgctcctacttcaccaagtatgacacca
acgagtcccaactactcgcccacatctccttcctactccccgacttcacccaactattct
cccacgtcgccgagttattccccaacatctccaagttattcaccaacatccccaagctac
tcgccgacatcgccatcttactccgcctcaccatcttattccccaacgtcacccagttat
tctccaacgtcacctagttactcaccaacctctccatcctattccccaacctctccatcc
tattcaccaacttctccaagctactcgccgacatcaccatcgtattctcccacttctcca
agttattcaccgacctcaccgagctattcgccaacctcaccttcttattcaccaacttct
cccagttacacacccacttccccatcgtattctccttcctctccttcatattcattgtct
tcacctcagtattcaccatcgtcaccagcatccccgtcttactccccaacatcccccaag
tactcgccaacgtctccttcgtactcccccgcatcgcccagtttcgtctccagtcctcag
tacactccggtgtcgccacaatattcacccacaagtccaacatattcgccaacgtctccg
tcatactcaccaacttcgccttcctattcaccgagctcgcctcagcattctccgggaggt
gcttcgcattattctccctcgtcaccgaaatactcgccgacgtctcccacttattcacca
acgagtccgcagtattcaccgtcaagctcaaaatattccccaacgtcaccaacatacaca
cccacaagtcccaattactcacctacttcaccaacttattcacctagtgttcctggctat
tctcctacttcaccaacgtattcacccacgtcaccaaattaa
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integrated database retrieval system
