Bemisia tabaci (sweet potato whitefly): 109036933
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Entry
109036933 CDS
T06019
Name
(RefSeq) DNA-directed RNA polymerase I subunit RPA1-like
KO
K02999
DNA-directed RNA polymerase I subunit RPA1 [EC:
2.7.7.6
]
Organism
btab
Bemisia tabaci (sweet potato whitefly)
Pathway
btab03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
btab00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
109036933
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
btab03021
]
109036933
Enzymes [BR:
btab01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
109036933
Transcription machinery [BR:
btab03021
]
Eukaryotic type
RNA polymerase I system
RNA polymerase I
Core subunits
109036933
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNA_pol_Rpb1_5
RNA_pol_Rpb1_2
RNA_pol_Rpb1_3
RNA_pol_Rpb1_1
RNA_pol_Rpb1_4
SURF2
Motif
Other DBs
NCBI-GeneID:
109036933
NCBI-ProteinID:
XP_018906903
LinkDB
All DBs
Position
Unknown
AA seq
1664 aa
AA seq
DB search
MYGAPNSLHGNLRSVYSDEAFFGIYSSEEVKNMSVVKIVTTNSFNVLGHPLPGGLYDPRL
GPCDRMLSCTTCGWMAMKCPGHTGHIELPFEVINPLFHKRIFEIISISCLQCHHVLLPPK
AKSLLQCQLRLLDAGFIVEAANVESHIIGNDNSCSDNESPEVFFNFLTSKLDQYIESLKQ
SQDKSDCKARLNQSFKSYDQERSSFFKLAFDQVKKNRVCPLCKYDTPILTFSGNKILSAP
RKRKTIEGTDLNKSTDGTSKSFERVRSGQVFLSPTELKDHLKSIWTNDKTFIEELIPVLK
RSPCSVPTDIIFLDAILVTPSAMRPFNIVRNSPVEHPNNTVYKSILANCFLLKSILFLAN
PKDDETIPEEIISITNRARGLTVEEKLQTAWHELQSNVDILLLGKVSSGNHVIPGLKQVI
EKKEGIIRMNMMGKRVNFAARSVITPDPNIDINEIGFPEPFAKVLTYPVPVTPWNVVELR
ELVKNGPMIYPGAVAIVNENGTVHRISDSKPVERESLAKRLLTPEETAKGGKVVLRHLMN
GDILLANRQPTLHKPSIMAHKARILKGEKTLRLHYANCKAYNADFDGDEMNTHFAQNEVA
RSEAYSIVNSTKQYLVPKDGTPLSGLIQDHVIGAVHLTTRGSFFDRVTYMHLVYQALSFI
REPIKVLPPCMIKPKALWSGKQVVSTVIINLTPRGKVPLNLNSSSKIPVKAWAYSKLAHL
LKNPKTMSESEVIIRNGQLLSGVIDKTHCGATSYGLVHSFYELYGGEASSRLLSSFSKLF
TCVLQLEGFTLDVKDILVKPKADEERSKIIEEVRSIGSLVAACAMNLPPDTDPEAISKEL
EISHQQIPNFRAIVDREYKSALDALTNSINSTCLPRGLLEEFPRNNLQLMVQSGAKGSTV
NTMQISCLLGQIELEGKRPPLMTSGRSLPSFKPYDTSPRAGGFIDGRFMTGIQPQEFFFH
CMAGREGLIDTAVKTSRSGYLQRCLIKHLEGLVVNYDMTVRDSDGSVIQFLYGEDGLDVC
KSQYFKPNLLQFLEKNVESVVDKACIRQFKKQAEVDQVIAYMDKVKLWRRRNRAMRSKKQ
RSFVRFSADMKNSLRNNAPGQINPAYGRSYLDLLLCKKWEESDRRTKERYQDSNLVCPDP
ALSRYAPGSYFGSISEKLDEVVENYIENSLGLSKGRQKIVRDMVNYKALVSICPPGEPVG
ILAAQSIGEPSTQMTLNTFHFAGRGEMNVTLGVPRLREILTVATKKLKTPCVDVPFLPCD
TPKKLEKRAEKLKKNMMKITLEDVLEYINVSERLDLEPHRHLVYELHMQFLPCQAYKDKT
NVKPNEILKHVEKYFLRELQINIMKASKIKAAFTHENFSKSNKATGNENGEEEEKDEEGA
KVVGKKKLDLDSDSSGSENEGDEEDATVSKRRTQQQEQQYDEPEEGEKEAPADEDDILAP
EQDDSAEVQDREFNVCEQYQFVSEYKYDTVDGQWCKVTLWLPLSCQHMDFSSMIRKIASS
SVIYEIPNIKRAITYENDGRTFLKTDGINLSEMFSYCDTLDINKLYSNDIHCVAEKYGIE
AAARVIVKEVQNVFQVYGITVDPRHLLLVADYMTYDGTYSPMNRKGIEKNSSPIQQMSFE
CSLNFLKNAALQGKADLLQSPSSRIFVGKHCRLGTGMMDVLIKT
NT seq
4995 nt
NT seq
+upstream
nt +downstream
nt
atgtacggagcaccgaacagtcttcatgggaacctacggagcgtttactccgatgaggcc
ttctttggcatttactcatctgaagaagtgaagaatatgagtgtggtaaagatagtgacg
acgaattctttcaatgtcctcggccatcccctacccggaggactctacgaccccagatta
gggccatgtgatagaatgttgtcatgcaccacctgtggctggatggccatgaaatgccct
ggtcacactggtcatatagagctaccatttgaggtaatcaatccactgtttcacaaacga
atctttgaaattatatcaatctcttgccttcaatgtcaccatgtcttattgccgccaaaa
gctaagtcattactccaatgccagctgaggctcttggatgctggatttattgtcgaagca
gccaacgttgagagtcatataattggaaatgacaattcttgtagtgacaatgaatcaccg
gaggtattttttaacttcttaaccagtaagcttgatcaatacattgaaagcttaaagcaa
tcacaggataaaagtgactgtaaggcaaggctaaaccagtcttttaagtcatatgaccag
gaaagatctagctttttcaaattagcttttgatcaagtgaaaaagaacagagtatgccct
ctctgcaaatatgacactcctattctaacattttctgggaacaaaattttgtctgccccg
cgaaaaaggaaaactatcgaaggaactgacctgaataagtcaactgatggcactagcaag
tcatttgaaagagttagaagtgggcaagtgtttctaagtccgactgaactgaaagaccat
ctcaaaagcatctggactaacgacaaaacatttattgaagagctaattcctgtcctaaag
cggagcccttgctcagttccaacggacataattttcctagatgccattcttgtgactccc
tcagcaatgagaccttttaatatagttcgaaattccccagttgaacatccaaacaatact
gtgtataagtccatccttgccaattgttttttgctgaagagtattcttttcttagctaat
ccaaaagatgatgaaactataccggaagaaattatatccatcaccaatcgggcccgtggt
ctgactgttgaggagaagctgcagacagcatggcatgagttgcagtctaatgtcgacatt
ctcttactgggaaaggtaagctctggaaaccatgtaatccctggcttaaagcaggtcatc
gaaaagaaagaaggtataatcagaatgaatatgatgggaaagcgtgtcaattttgcagca
cgatctgttatcactccggatccaaatatagacatcaatgaaattggatttccagaaccg
ttcgctaaggttttaacttatcctgtccctgtaacaccgtggaatgttgttgagttgagg
gaactagtcaaaaatggccctatgatttacccaggagctgttgcgattgtcaatgaaaat
ggaacagtacatcgcatcagtgatagtaaacctgttgaaagagaaagtcttgccaaacgc
ctgctaacccccgaagaaacggctaaaggtgggaaagttgttttacgtcaccttatgaat
ggtgacattcttctagccaatcgtcaacccaccttacacaaacctagtattatggctcac
aaggcaaggattctgaaaggggagaaaacattgcggttacactacgctaattgcaaagcg
tataatgcagactttgatggtgatgaaatgaatacccattttgcacaaaatgaagttgcg
aggagtgaagcttacagcatagtaaactcaaccaaacaatatctagtaccaaaagatggt
actcctctaagtggactcattcaagatcatgtcatcggtgctgtacatttgacaacaaga
ggatccttctttgacagagtaacctacatgcacttagtttatcaagcactgtcattcatc
cgagagcccatcaaagtgctcccaccgtgcatgatcaaaccaaaagctctctggtcaggg
aagcaggtagtttcaacagtaatcattaacttgacacctaggggtaaagtccctctcaac
ctgaattcctcatcaaagataccagtcaaagcctgggcctactcaaaattggcccacctg
ctgaaaaacccaaagacgatgagtgagtctgaggtcatcattcggaatggacagttacta
tctggagttattgataaaactcactgtggagcaacgtcttatggcttagttcatagcttt
tacgaattatatggtggtgaggcttcaagccggttgctaagctctttctccaagcttttc
acatgcgttctacagcttgaaggctttacacttgatgtcaaagatattttggtgaagcct
aaagcagatgaagaacggtcaaaaataattgaagaagtcaggagtataggatctctagta
gctgcttgcgcaatgaatctcccaccagacaccgatccagaagcaatctccaaagaatta
gaaatatcgcaccaacaaattccaaactttcgagcaattgtggatagggaatacaagtca
gcactagatgcactcaccaactccatcaactcaacgtgtttgcctcggggccttttagag
gaatttccaagaaataacttacaactcatggtacaatcaggagcgaaaggctccaccgtc
aacactatgcaaatttcctgtctccttggccaaatcgaattggaaggaaaacgcccgcct
ctaatgacatcgggacgttctttgcccagcttcaagccgtatgatacatcaccaagggcc
ggtggttttattgatggaagattcatgacaggcatccagccgcaagagttttttttccat
tgcatggctggtcgtgaaggtttaattgatactgctgttaagaccagtcgtagtggttat
ctccagcgatgtcttatcaagcatctggaaggattggtcgtaaattatgatatgaccgtc
cgcgatagcgatggtagcgttattcagtttttgtatggtgaagatgggctggatgtatgc
aagtctcagtatttcaaaccgaatttattacagtttttagagaaaaatgtggaatcagtt
gtcgataaagcatgcatcagacaattcaagaaacaggcggaagtagaccaagttattgct
tacatggataaagtaaaattatggaggagaaggaatcgtgccatgcggtccaaaaaacaa
cgctcatttgtgagattttccgcagacatgaagaacagcctcagaaacaatgctcctggg
caaatcaatccagcatatgggagatcatatcttgacttgctgctgtgtaaaaaatgggaa
gagtcggacagaagaactaaagaaagatatcaagattcaaacttagtctgtccagaccct
gctctttcaagatatgcacctggaagctactttggatccatatcagagaaacttgacgaa
gtcgtagaaaattatatcgaaaatagcttgggactgtccaaaggtaggcagaaaatagtc
agagatatggtcaattacaaagccctggtttccatttgtccgcctggagagcctgtggga
atccttgctgctcagtcaataggagagccgtccacacagatgaccctgaacacatttcac
tttgctggtcgaggagaaatgaatgtcactctaggagttccgcgtctaagggaaattctc
actgttgcaaccaagaaactcaaaactccatgcgtagacgtaccttttttgccttgcgat
actcccaaaaagttggagaagcgcgcagaaaaactaaagaaaaacatgatgaagataact
ttagaagatgtcttggaatatataaatgtttcagagaggctggatcttgaaccgcacaga
catcttgtgtatgaattgcacatgcagttcttaccttgtcaagcgtacaaagacaaaacg
aatgtgaaaccaaacgaaatcttgaaacatgtagagaaatactttttgcgagaactgcaa
attaatattatgaaggcttcaaaaatcaaagctgcttttacacacgagaacttcagcaaa
tcgaacaaagcaacaggcaatgaaaatggagaagaagaagaaaaggatgaggaaggtgcc
aaagtggtaggaaaaaagaagctagacttggactctgatagctctggatctgaaaatgag
ggagatgaagaagatgcaacggtctctaaacgaaggacacagcagcaggaacaacagtat
gacgaaccagaagaaggagaaaaagaagctcctgcagatgaagatgacattttagctcca
gagcaagatgatagtgctgaagtacaagaccgagaattcaatgtttgtgaacagtatcaa
ttcgtcagtgaatacaagtacgacacagttgacggtcagtggtgtaaggttacattatgg
ttgccgctcagttgtcaacacatggacttctcttctatgattaggaagattgcctcctca
tctgtgatctatgagatcccaaatattaaacgagcaatcacctatgaaaatgatgggcga
acatttttaaagactgatggaattaacctaagtgaaatgtttagttactgtgatacttta
gacatcaacaaattgtactcaaatgatattcattgtgtagcagaaaagtatggcattgaa
gcagcagctagagtcatcgtaaaagaagtgcaaaatgtgtttcaggtttatgggattacg
gtagatccgcgacatcttctgctcgtagctgactatatgacttatgatggcacttattcc
ccaatgaataggaaaggcattgagaagaattcctctccaatccaacagatgtcttttgaa
tgctctctcaacttcttaaagaatgcagctcttcaaggcaaagccgatctattacaatct
ccgtctagtcgtatttttgtaggaaaacattgtaggttaggaactggaatgatggatgtt
ctaataaaaacttaa
DBGET
integrated database retrieval system
