Bemisia tabaci (sweet potato whitefly): 109039982
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Entry
109039982 CDS
T06019
Name
(RefSeq) DNA mismatch repair protein Msh6
KO
K08737
DNA mismatch repair protein MSH6
Organism
btab
Bemisia tabaci (sweet potato whitefly)
Pathway
btab03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
btab00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
109039982
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
btab03400
]
109039982
DNA repair and recombination proteins [BR:
btab03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
Mismatch and loop recognition factors
109039982
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
MutS_V
MutS_III
MutS_I
MutS_II
MutS_IV
Motif
Other DBs
NCBI-GeneID:
109039982
NCBI-ProteinID:
XP_018911272
LinkDB
All DBs
Position
Unknown
AA seq
1154 aa
AA seq
DB search
MSGKNTLFNYFQRSPVTQLSPSNPKKINETPDKSSEKKRKADSVLKARDDNQPKTPTSRR
GSSKTPAKEKKRVKLEEDEEVEDEVTPELKRRKLDIPDEDSGDEFVPDDESDSESEASPE
PSPDENSEVDEDLDTIKKKQRKTTIAPSRTPKARKKPISLSSKDDKQESATSDGTRSASD
DWPHLKLTWLHKDKLKDAQGRPVNHPDYDPKTLYVPSEFKNSLTPAVRQWWEVKSNLFDC
VLFFKLGKFYELYHMDAIVGMTELNLTPMRGEQAHVGFPESAYGRYAATLVEKGYKVARI
EQTETPDTMNERLKTMIKPTKFDKVVKREICQITTPGTRIFSVLDGECKEAGNRYLLAIV
EKEEDRHNFVYGVCFVDTSIGTFHIGQFPDDRHCSRLRTLIAHHPPTQILYEKNCISPKL
QELFRTGVATALKEGLHPESQFWSPSKTLITLSESDYFSASDFPVELKNFIRATGDSFPL
TAESHCEFGIQALGAIIFYLKRCQIDHQLLSMAHFSVYNVKDGFRDTTSKELQTVDIANR
NMVLDAITLKNLSIVEDEYGGIQGTLLQKLDNCSTAFGKRLLYQWICSPLTNIKSIEARQ
AAIKALLEEPQIIGDVRSAISGLPDLERSFAKIYSQSSHGLKAEHPDARAILFDEHVYSK
RKICEFVATINGFDKIQQMMTTLQSCGVGDSAELLANCCYHPHSELSGKFPDLSEHISFF
KKAFNHAEAQRVGRIIPIAGVDNDYDQVCAELKDLERETEDYLRLQRRHFGCNVIFVGTD
KKRFQLEVPETAASKAGDNYDLQSQKKGFKRYYTREGREFVERMMAAEEKKRKVLMYLRQ
RLFSKFCERSEAWNIAVECTAVLDVLVSLAEYCRTEETICIPKFEPAQRNKQTYVKLIEG
KYPCNTVDETFIPNSTIIGVDPHVILVTGPNMGGKSTLMRQLGLIVIMAHMGCHVPAESL
ELNPVDRIFTRIGANDDIMAGGSTFYVELCETASILHHATTHSLALIDELGRGTSTYDGT
AIASAVLKELCRMKCRTLFSTHYHSLVEDFRKNPDVMLGHMTCMVENDDDNDDEATEEKV
IFLYKFGEGACPKSYGFNAARLGGIPTHITKRAQQCAKQLESEISRKRSVKKLLRGSLKV
NALLSVATWSLELP
NT seq
3465 nt
NT seq
+upstream
nt +downstream
nt
atgtctggcaagaacacattgttcaattacttccagagatctccggtcactcaactcagt
ccttcaaatccgaagaagatcaatgagactcctgataagtcctctgagaaaaaacgcaaa
gcggactctgttctaaaggctagagatgataaccaaccgaagaccccaaccagtcgacga
ggttcctctaaaactccagcgaaagagaaaaagagagtcaaactagaagaagatgaagag
gtggaggatgaagtaactcctgaattaaaaaggagaaaattggatattccagatgaggat
tctggagatgaatttgtaccagatgatgaatcagactccgaatctgaagcttctccagaa
ccctcaccagatgaaaattcagaagtagatgaagatctcgataccatcaaaaagaaacaa
agaaaaacgacgattgctcctagtcgcacaccaaaagccagaaagaagcccatcagtctg
tcaagcaaagatgacaagcaagagagtgcgacatcagatggcactagatcagcatcggac
gattggcctcacttaaagttaacctggttgcacaaagacaaactgaaagatgcgcaaggt
agacctgtgaatcatcctgactatgatccgaaaacactgtatgttccatccgaatttaag
aattctttaacacccgctgtcagacaatggtgggaggttaaatccaatttgtttgattgt
gtcctctttttcaaactggggaaattttatgagctctatcacatggatgccattgttgga
atgacggaattgaatctcacaccgatgaggggtgagcaagctcatgtaggttttcctgag
agtgcttatggtcgatacgcagccactttggtcgaaaaaggctataaagttgcaagaata
gagcaaaccgaaactcctgacaccatgaatgagagattgaaaacaatgatcaaaccaacc
aagtttgacaaagttgtcaagagagaaatttgccaaataacaactcctgggactcgaatt
ttcagtgttctggacggggaatgcaaagaagccggtaaccgctatttgttggccatcgtc
gaaaaagaagaagatcgtcataattttgtgtatggagtttgctttgttgatacttcaatc
ggtaccttccacattggtcaatttccagatgatcgtcattgttctcgattgaggactttg
attgcacatcatcctcctacccaaatcttatatgaaaagaattgcatctctcccaaactt
caggagctcttcaggactggagttgcaacagccttgaaagaaggtctccatcctgagtcg
cagttctggagcccatctaaaactttgatcacccttagtgaatcagactatttttctgcc
tcggacttccctgtagagttgaaaaactttatccgcgctactggggattcttttccttta
actgcagaaagccattgtgaattcggtattcaagcattgggtgctatcatattttatttg
aaacggtgtcaaatagatcaccagctcctgtcaatggcacacttctcagtttacaatgtg
aaagatggtttccgagatactacttcaaaggaactccaaactgttgatatagctaataga
aatatggttttagatgcaatcaccctcaagaatctcagtattgttgaagatgagtacggg
ggcattcaaggaactttgcttcaaaaactcgataattgctctactgcttttggaaaaagg
ttgctctatcagtggatatgcagtccgctaacgaacataaagagcattgaagctcgacag
gctgccatcaaagctctccttgaagaacctcaaattattggtgatgttcgtagtgccata
agtggacttcccgatcttgaacgatcttttgccaagatttactctcagagcagccatgga
ttgaaagcagaacaccctgatgctagagccattctttttgatgagcatgtttactccaaa
agaaaaatctgtgaatttgttgctaccatcaatggatttgacaaaattcaacagatgatg
acaacattgcaaagttgtggtgttggagattcagcggagctgttagcaaattgctgctat
catcctcattcagaattaagtggaaaatttcctgacctgtcagagcatattagtttcttt
aaaaaagcattcaatcatgcagaggcacagagagtgggtcgcattattcctattgcaggt
gttgataacgattacgatcaagtgtgtgctgaactaaaagatcttgaaagagagaccgaa
gattatttacggttacagcgtcgccattttggctgcaatgtaatttttgttggcacggac
aaaaagaggttccagttagaagttccagaaactgctgccagtaaagccggagataattat
gatttacaatcacaaaagaaaggattcaagaggtattacacccgtgaaggcagagagttt
gtcgagagaatgatggctgccgaagaaaagaaaagaaaagtcctaatgtatcttcgtcaa
aggttattctcgaagttctgtgagaggtcggaagcatggaatattgcagtggagtgcaca
gctgttctcgacgttttagtctccttagccgagtattgtcgaacagaggaaaccatatgc
attcccaagtttgagccagctcaaagaaataagcagacttatgtcaagttgattgaaggt
aaatatccttgcaacacagtagatgaaacctttattccaaacagcacgatcatcggagta
gatcctcatgtcatattagtcactggacccaatatgggcggtaaatcaactctcatgcga
cagctaggcttaatcgtaatcatggcacatatgggttgccatgttccagcagaaagtttg
gagctcaaccctgttgaccgaatattcacccggatcggtgcaaatgatgatataatggca
ggaggcagcacattctatgtcgagctctgcgaaactgcttcaattctgcatcatgcaaca
acacactcgttagctttaattgatgaactcggtcgaggtacatccacctatgacggcaca
gccattgcatctgctgttctcaaagaactctgccgaatgaaatgtaggactctgttttca
actcactatcattcgcttgtcgaagatttccgaaagaaccctgacgtaatgcttggccac
atgacatgcatggttgagaatgatgatgataatgatgatgaggctactgaagagaaagtc
atatttttgtataaatttggagaaggcgcttgtccaaaatcgtatggttttaatgctgcc
aggttaggtggtattccgactcatatcacaaaacgagcacagcagtgtgctaaacaatta
gaatcagaaattagtcgcaagagatctgtcaaaaaattactacgcggctccttgaaggta
aatgctctccttagtgtggccacttggtctcttgaattaccatga
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