KEGG   Bemisia tabaci (sweet potato whitefly): 109039982
Entry
109039982         CDS       T06019                                 
Name
(RefSeq) DNA mismatch repair protein Msh6
  KO
K08737  DNA mismatch repair protein MSH6
Organism
btab  Bemisia tabaci (sweet potato whitefly)
Pathway
btab03430  Mismatch repair
Brite
KEGG Orthology (KO) [BR:btab00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03430 Mismatch repair
    109039982
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:btab03400]
    109039982
DNA repair and recombination proteins [BR:btab03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   MMR (mismatch excision repair)
    Mismatch and loop recognition factors
     109039982
SSDB
Motif
Pfam: MutS_V MutS_III MutS_I MutS_II MutS_IV
Other DBs
NCBI-GeneID: 109039982
NCBI-ProteinID: XP_018911272
LinkDB
Position
Unknown
AA seq 1154 aa
MSGKNTLFNYFQRSPVTQLSPSNPKKINETPDKSSEKKRKADSVLKARDDNQPKTPTSRR
GSSKTPAKEKKRVKLEEDEEVEDEVTPELKRRKLDIPDEDSGDEFVPDDESDSESEASPE
PSPDENSEVDEDLDTIKKKQRKTTIAPSRTPKARKKPISLSSKDDKQESATSDGTRSASD
DWPHLKLTWLHKDKLKDAQGRPVNHPDYDPKTLYVPSEFKNSLTPAVRQWWEVKSNLFDC
VLFFKLGKFYELYHMDAIVGMTELNLTPMRGEQAHVGFPESAYGRYAATLVEKGYKVARI
EQTETPDTMNERLKTMIKPTKFDKVVKREICQITTPGTRIFSVLDGECKEAGNRYLLAIV
EKEEDRHNFVYGVCFVDTSIGTFHIGQFPDDRHCSRLRTLIAHHPPTQILYEKNCISPKL
QELFRTGVATALKEGLHPESQFWSPSKTLITLSESDYFSASDFPVELKNFIRATGDSFPL
TAESHCEFGIQALGAIIFYLKRCQIDHQLLSMAHFSVYNVKDGFRDTTSKELQTVDIANR
NMVLDAITLKNLSIVEDEYGGIQGTLLQKLDNCSTAFGKRLLYQWICSPLTNIKSIEARQ
AAIKALLEEPQIIGDVRSAISGLPDLERSFAKIYSQSSHGLKAEHPDARAILFDEHVYSK
RKICEFVATINGFDKIQQMMTTLQSCGVGDSAELLANCCYHPHSELSGKFPDLSEHISFF
KKAFNHAEAQRVGRIIPIAGVDNDYDQVCAELKDLERETEDYLRLQRRHFGCNVIFVGTD
KKRFQLEVPETAASKAGDNYDLQSQKKGFKRYYTREGREFVERMMAAEEKKRKVLMYLRQ
RLFSKFCERSEAWNIAVECTAVLDVLVSLAEYCRTEETICIPKFEPAQRNKQTYVKLIEG
KYPCNTVDETFIPNSTIIGVDPHVILVTGPNMGGKSTLMRQLGLIVIMAHMGCHVPAESL
ELNPVDRIFTRIGANDDIMAGGSTFYVELCETASILHHATTHSLALIDELGRGTSTYDGT
AIASAVLKELCRMKCRTLFSTHYHSLVEDFRKNPDVMLGHMTCMVENDDDNDDEATEEKV
IFLYKFGEGACPKSYGFNAARLGGIPTHITKRAQQCAKQLESEISRKRSVKKLLRGSLKV
NALLSVATWSLELP
NT seq 3465 nt   +upstreamnt  +downstreamnt
atgtctggcaagaacacattgttcaattacttccagagatctccggtcactcaactcagt
ccttcaaatccgaagaagatcaatgagactcctgataagtcctctgagaaaaaacgcaaa
gcggactctgttctaaaggctagagatgataaccaaccgaagaccccaaccagtcgacga
ggttcctctaaaactccagcgaaagagaaaaagagagtcaaactagaagaagatgaagag
gtggaggatgaagtaactcctgaattaaaaaggagaaaattggatattccagatgaggat
tctggagatgaatttgtaccagatgatgaatcagactccgaatctgaagcttctccagaa
ccctcaccagatgaaaattcagaagtagatgaagatctcgataccatcaaaaagaaacaa
agaaaaacgacgattgctcctagtcgcacaccaaaagccagaaagaagcccatcagtctg
tcaagcaaagatgacaagcaagagagtgcgacatcagatggcactagatcagcatcggac
gattggcctcacttaaagttaacctggttgcacaaagacaaactgaaagatgcgcaaggt
agacctgtgaatcatcctgactatgatccgaaaacactgtatgttccatccgaatttaag
aattctttaacacccgctgtcagacaatggtgggaggttaaatccaatttgtttgattgt
gtcctctttttcaaactggggaaattttatgagctctatcacatggatgccattgttgga
atgacggaattgaatctcacaccgatgaggggtgagcaagctcatgtaggttttcctgag
agtgcttatggtcgatacgcagccactttggtcgaaaaaggctataaagttgcaagaata
gagcaaaccgaaactcctgacaccatgaatgagagattgaaaacaatgatcaaaccaacc
aagtttgacaaagttgtcaagagagaaatttgccaaataacaactcctgggactcgaatt
ttcagtgttctggacggggaatgcaaagaagccggtaaccgctatttgttggccatcgtc
gaaaaagaagaagatcgtcataattttgtgtatggagtttgctttgttgatacttcaatc
ggtaccttccacattggtcaatttccagatgatcgtcattgttctcgattgaggactttg
attgcacatcatcctcctacccaaatcttatatgaaaagaattgcatctctcccaaactt
caggagctcttcaggactggagttgcaacagccttgaaagaaggtctccatcctgagtcg
cagttctggagcccatctaaaactttgatcacccttagtgaatcagactatttttctgcc
tcggacttccctgtagagttgaaaaactttatccgcgctactggggattcttttccttta
actgcagaaagccattgtgaattcggtattcaagcattgggtgctatcatattttatttg
aaacggtgtcaaatagatcaccagctcctgtcaatggcacacttctcagtttacaatgtg
aaagatggtttccgagatactacttcaaaggaactccaaactgttgatatagctaataga
aatatggttttagatgcaatcaccctcaagaatctcagtattgttgaagatgagtacggg
ggcattcaaggaactttgcttcaaaaactcgataattgctctactgcttttggaaaaagg
ttgctctatcagtggatatgcagtccgctaacgaacataaagagcattgaagctcgacag
gctgccatcaaagctctccttgaagaacctcaaattattggtgatgttcgtagtgccata
agtggacttcccgatcttgaacgatcttttgccaagatttactctcagagcagccatgga
ttgaaagcagaacaccctgatgctagagccattctttttgatgagcatgtttactccaaa
agaaaaatctgtgaatttgttgctaccatcaatggatttgacaaaattcaacagatgatg
acaacattgcaaagttgtggtgttggagattcagcggagctgttagcaaattgctgctat
catcctcattcagaattaagtggaaaatttcctgacctgtcagagcatattagtttcttt
aaaaaagcattcaatcatgcagaggcacagagagtgggtcgcattattcctattgcaggt
gttgataacgattacgatcaagtgtgtgctgaactaaaagatcttgaaagagagaccgaa
gattatttacggttacagcgtcgccattttggctgcaatgtaatttttgttggcacggac
aaaaagaggttccagttagaagttccagaaactgctgccagtaaagccggagataattat
gatttacaatcacaaaagaaaggattcaagaggtattacacccgtgaaggcagagagttt
gtcgagagaatgatggctgccgaagaaaagaaaagaaaagtcctaatgtatcttcgtcaa
aggttattctcgaagttctgtgagaggtcggaagcatggaatattgcagtggagtgcaca
gctgttctcgacgttttagtctccttagccgagtattgtcgaacagaggaaaccatatgc
attcccaagtttgagccagctcaaagaaataagcagacttatgtcaagttgattgaaggt
aaatatccttgcaacacagtagatgaaacctttattccaaacagcacgatcatcggagta
gatcctcatgtcatattagtcactggacccaatatgggcggtaaatcaactctcatgcga
cagctaggcttaatcgtaatcatggcacatatgggttgccatgttccagcagaaagtttg
gagctcaaccctgttgaccgaatattcacccggatcggtgcaaatgatgatataatggca
ggaggcagcacattctatgtcgagctctgcgaaactgcttcaattctgcatcatgcaaca
acacactcgttagctttaattgatgaactcggtcgaggtacatccacctatgacggcaca
gccattgcatctgctgttctcaaagaactctgccgaatgaaatgtaggactctgttttca
actcactatcattcgcttgtcgaagatttccgaaagaaccctgacgtaatgcttggccac
atgacatgcatggttgagaatgatgatgataatgatgatgaggctactgaagagaaagtc
atatttttgtataaatttggagaaggcgcttgtccaaaatcgtatggttttaatgctgcc
aggttaggtggtattccgactcatatcacaaaacgagcacagcagtgtgctaaacaatta
gaatcagaaattagtcgcaagagatctgtcaaaaaattactacgcggctccttgaaggta
aatgctctccttagtgtggccacttggtctcttgaattaccatga

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