Bemisia tabaci (sweet potato whitefly): 109043788
Help
Entry
109043788 CDS
T06019
Name
(RefSeq) protein CLP1 homolog
KO
K14399
polyribonucleotide 5'-hydroxyl-kinase [EC:
2.7.1.78
]
Organism
btab
Bemisia tabaci (sweet potato whitefly)
Pathway
btab03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
btab00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
109043788
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
btab03019
]
109043788
Enzymes [BR:
btab01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.1 Phosphotransferases with an alcohol group as acceptor
2.7.1.78 polynucleotide 5'-hydroxyl-kinase
109043788
Messenger RNA biogenesis [BR:
btab03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Pre-mRNA cleavage factor IIm (CFIIm)
109043788
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
CLP1_P
Clp1
CLP1_N
AAA_22
MMR_HSR1
AAA_16
CbiA
GTP_EFTU
nSTAND3
Motif
Other DBs
NCBI-GeneID:
109043788
NCBI-ProteinID:
XP_018916643
UniProt:
A0A9P0ABY2
LinkDB
All DBs
Position
Unknown
AA seq
424 aa
AA seq
DB search
MSVEESQEINLEADQELRIEVENKNETVTIELKTGMAEIFGTEIVKGRKYVFSTGAKIAV
FTWQGCTIIYTGRKNSCYTAKETPMMFYLNCHACLEQLRQKAEQDNTRGPVTMIVGPVDV
GKSTLCRILLNYAVRMGGQGRRPIFVDLDVGQGSISVPGTIGALMVERPASPTEGFSVQA
PLVYQYGHVSMQKNPSLYNMLVSRLAEVVQDRMQANKKANVSGVIINTCGWTKDSGYKIL
THIAQAFEVDVILVLDQERLFNELVRDMPSFVKVVLLPKSGGVVERPKSYRMEARDGRVR
QYFYGTTSLPLHPHSFDVKFSELKIYKIGAPALPDSCMPVGVKAEDYLTKVVSVQPSPSL
LNHLLAISFATSAEEDVIQTNVAGFVCITNVDMDRQTMTILSPQPKPLPDAVFLVSEVQF
MDSH
NT seq
1275 nt
NT seq
+upstream
nt +downstream
nt
atgtcagtggaagaatcgcaagaaatcaaccttgaggcggatcaagaattgcgaattgag
gtcgagaacaaaaatgaaacggtcacaattgagctgaaaactggaatggcagaaattttt
gggactgaaatagttaaaggtcgaaagtatgtgttctctactggagcaaaaatagctgtt
ttcacatggcaaggatgtactatcatttacacaggaagaaaaaactcatgctatacagca
aaagaaactccaatgatgttttatctgaactgtcacgcgtgtttggaacaactgcgacaa
aaagctgagcaagacaacactcgcggccctgtaacaatgatagttggtcctgtggatgtt
ggaaaatcaactctgtgcaggattctcctgaattacgcagtgcgcatgggaggccaggga
cgaagaccaatttttgtagatttggatgtaggacaaggatctatctctgttccgggcacc
ataggtgccttgatggttgaacgaccagcttctccaactgaaggtttttccgttcaagca
cctcttgtttatcagtatggtcatgtctcgatgcagaagaacccatcactgtacaatatg
ctagtctctcggttagcagaagttgttcaagacaggatgcaggcaaataaaaaagcaaat
gtatctggtgttattatcaatacttgtggctggaccaaagatagtggctataaaatctta
actcacattgctcaggcttttgaagtggatgtcattttggttttggatcaagaacggttg
ttcaatgaacttgtcagggacatgccatcctttgtgaaagttgttctcttacccaaaagc
ggaggagtagttgagcgaccaaaaagttatagaatggaggctcgagatggaagagtgagg
cagtacttctatggaacaacctctctgcctttacacccacattcctttgatgtgaaattc
agtgaactgaaaatctacaaaatcggcgcacctgctctgccagactcttgcatgccagtt
ggagtgaaggcggaggattatctgacgaaagttgtgtctgttcagcccagtcctagtcta
ttgaaccatttgttggccatcagttttgcaacttccgcagaagaagatgtcattcaaacc
aatgttgctggttttgtttgcataacaaatgttgatatggaccggcaaactatgactatt
ttatcaccacaaccaaaacctcttcctgatgctgtcttcctggtctctgaagttcagttc
atggacagccactga
DBGET
integrated database retrieval system
