Budorcas taxicolor (takin): 128055425
Help
Entry
128055425 CDS
T08909
Symbol
POLR1A
Name
(RefSeq) DNA-directed RNA polymerase I subunit RPA1
KO
K02999
DNA-directed RNA polymerase I subunit RPA1 [EC:
2.7.7.6
]
Organism
btax
Budorcas taxicolor (takin)
Pathway
btax03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
btax00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
128055425 (POLR1A)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
btax03021
]
128055425 (POLR1A)
Enzymes [BR:
btax01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
128055425 (POLR1A)
Transcription machinery [BR:
btax03021
]
Eukaryotic type
RNA polymerase I system
RNA polymerase I
Core subunits
128055425 (POLR1A)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb1_5
RNA_pol_Rpb1_2
RNA_pol_Rpb1_3
RNA_pol_Rpb1_4
RNA_pol_Rpb1_1
Motif
Other DBs
NCBI-GeneID:
128055425
NCBI-ProteinID:
XP_052503946
LinkDB
All DBs
Position
11:108174789..108259002
Genome browser
AA seq
1721 aa
AA seq
DB search
MLASKNMPWRRLQGISFGMYSAEELKKLSVKSITNPRYLDSLGNPSVNGLYDLALGPADS
KEVCSTCVQDFTHCSGHLGHIELPLTVYNPLLFDKLYLLLRGSCLNCHMLTCPRAVVHLL
LCQLRVLEVGALQAVYELERILYRFLEENADPTACEIQEELEQYTIKILQNNLLGSQGAQ
VKNVCESRSKLISVFWKVHMTAKRCPHCKTGRSVIRKEHNSKLTITYPAMVHRRADQKDT
EPQGIEEAQMGKRGYLTPSSAQEHLIALWKNEGFFLNYLFLGLEDVGMESRFNPSMFFLD
FLVVPPSRYRPVNRLGDQMFTNGQTVNLQAVMKDVVLIRKLLALMAQEQELPSEVAAPTT
EEEKDSSMAMDRSFLSQLPGQSLTDRLYNIWIRLQSHVNIVFDSEMDKLMMEKYPGIRQI
LEKKDGLFRKHMMGKRVDYAARSVICPDMYINTNEIGIPMVFATKLTYPQPVTPWNVQEL
RQAVINGPNVHPGASMVINEDGSRTALSASDLTQREAVAKQLLTPATGAPKPQGTKIVCR
HVKNGDILLLNRQPTLHRPSIQAHRARVLPEEKVLRLHYANCKAYNADFDGDEMNAHFPQ
SELGRAEAYVLACTDQQYLVPKDGQPLAGLIQDHMVSGANMTIRGCFFSREQYMELVYRG
LTDKVGRVKLLPPAILKPFPLWTGKQVVSTLLINIIPEDHIPLNLSGKAKIGGKAWVKES
PRPVPGFNPDSMCESQVIIRAGELLCGVLDKAHYGSSAYGLVHCCYEIYGGETSGRVLTC
LARLFTAYLQLYRGFTLGVEDILVKPKADVRRHGIIKESTHCGPRAVRAALNLPEAASCD
EVQGKWQDAHLNKDQRDFNMIDLKFKEEVNHYSNEINKACMPFGLHRQFPENNLQMMVQS
GAKGSTVNTMQISCLLGQIELEGRRPPLMASGKSLPCFKPYEFTPRAGGFVTGRFLTGIK
PPEFFFHCMAGREGLVDTAVKTSRSGYLQRCIIKHLEGLVVQYDLTVRDSDGSVVQFLYG
EDGLDIPKTQFLQPKQFPFLASNYEVIMKSKHLHEVLSRADPQKALRHFRAVKKWHSKHS
NALLRKGAFLNYSQKIQAAVKALNLEGTNQNGRTPETYQMLRMWAELDEQSRRKYQKKAA
PCPDPSLSVWRPDIYFASVSETFEKKMDDYSCEWAAQAERSYEKSGLSLDSLRTLLQLKW
QRSLCDPGEAVGLLAAQSIGEPSTQMTLNTFHFAGRGEMNVTLGIPRLREILMVASANIK
TPMMSVPVFSTKKALKKVKSLKKQLTRVCLGEVLEKIDVQESFYMGEKQNKFRVYKLRFQ
FLPHVYYQQEKCMRPEDILRFMETRFFKILMEAIRKKNSKASAFRSVNTRRATQRDLDNA
GESERSRGEQEGDEEEEGHIVDAEAEEGDADASDAKRKEKQEEEVDYDSEEEEEEEEEKE
DEEKEDEDVQEEGTSLKEDVQQEQEEGGWAPEESSLPGAPLMQPQKRARSREPQGAEAVE
RRAQAVRECHPFIEDYQYDTQGGLWCQVTLKLPLMKVNFDMSSLVASLAQGAVIYATKGI
TRCLLNETTNSKNEKELVLNTEGINLPELFKYAEVLDLRRLYSNDIHAMASTYGIEAALR
VIEKEIKDVFAVYGIAVDPRHLSLVADYMCFEGVYKPLNRFGIRSNSSPLQQMTFETSFQ
FLKQATLLGSHDELRSPSACLVVGKVVKGGTGLFELKQPLR
NT seq
5166 nt
NT seq
+upstream
nt +downstream
nt
atgttggcctcaaagaacatgccctggcggcggcttcagggcatttccttcgggatgtat
tcggccgaagaactcaagaaattaagtgtgaagtccattacgaaccctcggtacctggac
agcctggggaacccctcggtaaatggcctgtatgatttagctctgggccccgccgactcc
aaagaggtgtgctccacttgcgtgcaggacttcacccactgctctgggcacttgggccac
atcgagctcccgctcaccgtgtacaaccctctcctcttcgataaactctacctgttgctc
cggggctcctgtttaaactgtcacatgctgacctgcccccgggctgtggttcacctctta
ctctgccagctgagagtcctggaagttggggccctgcaagcagtgtatgagctggagaga
attctctacaggtttctggaagaaaatgctgatcctactgcctgtgaaattcaggaagag
ctagaacaatatacaatcaaaatcctgcagaacaacctcctgggatcccagggtgcacaa
gtgaaaaatgtctgtgagagcaggagcaaactcatctctgtcttctggaaggtacatatg
actgctaagagatgtccccactgcaaaactgggcggtcagtgatccgaaaggagcacaat
agcaaactgaccatcacatatccggccatggtgcacaggagagctgaccagaaggacact
gaaccccagggaattgaggaagctcagatgggaaaacgaggatacctgacaccctccagt
gctcaagaacacctcatagctctttggaaaaatgaagggttctttctgaattaccttttt
ttgggactggaagatgttggcatggagtccaggttcaaccccagtatgttctttctggat
ttcttggtggtaccaccctcaaggtatcgccctgtcaaccgccttggggaccagatgttc
accaacgggcagacggtgaacttgcaggctgtcatgaaggacgtggttctgatccgaaaa
cttctggcactgatggcccaagaacaggagctgccaagtgaggtggcagcacccaccaca
gaagaggaaaaagactcttcgatggccatggaccgatcctttttgagtcagcttccaggc
cagtccctcacagacagactttacaacatttggattcgccttcagagccacgttaatatt
gtgtttgatagcgagatggacaaattaatgatggaaaagtaccccggtattagacagatc
ctggagaagaaggatggtttgttccgaaagcacatgatggggaagcgcgtagactacgca
gcccgctcagtcatctgcccggacatgtacatcaacaccaacgaaattggaattcccatg
gtgtttgccacaaagctgacctaccctcaaccagtcaccccctggaatgttcaggaactg
aggcaggccgtcatcaacggccccaacgtgcaccccggagcctccatggtcatcaacgag
gatggcagtcgcacagccctgagcgcctcagacctcacacagcgggaggccgtggccaaa
cagctcctgacaccagctacaggggcccctaagccccaggggacaaaaattgtgtgccgg
catgtgaagaacggggacattctcctcctgaaccggcagcccaccctgcacaggccctcc
atccaggcacatcgcgcccgtgtcctccccgaggagaaagtcctgcggctccactacgcc
aactgcaaggcctacaacgccgacttcgatggagacgagatgaacgcccacttcccccag
agtgaactgggccgggccgaggcctacgtcctggcctgcaccgatcagcagtaccttgtt
cccaaggatggccagccattggcggggctgatccaagatcacatggtttcaggggcaaac
atgaccattcgaggctgctttttcagccgggagcagtatatggagctggtgtaccgagga
ctcacagacaaagtggggcgtgtgaagctccttcctcctgccatcctgaagccctttcct
ctgtggacaggaaagcaggttgtgtccacattgctcatcaacataatcccagaggaccat
atccccctgaacttgtcaggaaaggcaaagatcggcggaaaggcctgggtgaaggagtct
cctcggcccgttcccggctttaaccccgactccatgtgcgagtcccaggtgatcatcaga
gcaggggagctgctgtgcggggtgctggacaaggcgcactacgggagctccgcctacggc
ctggtccactgctgctacgagatctatggtggggagaccagcggcagggttctcacctgc
ctggcccgcctcttcaccgcctacctgcagctctacagaggcttcaccttgggagtagaa
gacattttggtcaagccaaaggcggatgtcaggagacatggaatcattaaagagtccacc
cactgtgggccacgggccgtcagggctgcgttaaacctgccagaggcagcgtcatgtgat
gaggtccaagggaaatggcaggatgcccatctgaataaagaccagagggattttaacatg
attgacctgaagttcaaggaggaagtgaaccattacagcaatgaaattaacaaggcatgc
atgcccttcggtctgcacagacagttcccagagaacaatctgcagatgatggtgcagtct
ggggccaaaggttcgacagtgaacaccatgcagatttcatgcctgctgggccagatcgaa
ttagaaggtcggagacccccgctcatggcatccggcaagtcgttgccttgcttcaagcct
tacgaattcacccccagggctggcggcttcgtcactggcaggttcctcactggcatcaag
cctccggagttcttcttccactgcatggctgggcgagagggtctggtggacactgctgtg
aagaccagccgttccggctacctccagaggtgcatcatcaaacacctggaggggctggtt
gtccagtatgacctgacagtccgcgacagtgacggcagcgtggtgcagttcctgtacggg
gaggacggcctggacatccccaagacacagttcctgcagcctaagcagttccccttcctc
gccagcaactatgaggtaataatgaaatcgaagcatctccatgaagttttatccagagcg
gatccccagaaagctctccgtcacttcagagccgtcaaaaaatggcacagcaagcattcc
aacgccctcctgaggaaaggcgccttcttgaattactcccagaaaattcaggcggctgtg
aaagccttgaaccttgagggcacaaaccagaatggccgcacccccgagacttaccagatg
ctgaggatgtgggctgagttagatgaacaaagccggaggaagtaccagaagaaggcggct
ccttgtcctgaccccagtctgtctgtctggcgcccagacatctactttgcatccgtgtca
gaaacatttgaaaagaagatggacgactacagctgtgagtgggcagctcaggcagagagg
agttacgagaaatcggggctttctctcgacagtttgaggactctgctgcagctcaagtgg
cagcgctcactatgcgatccgggtgaggccgtgggcctgctggccgcccagagcatcggg
gagccctccacacagatgacgctgaacaccttccactttgccggcagaggcgaaatgaac
gtcaccctgggcattccgaggttgcgggaaatcctcatggtggccagtgccaacatcaag
acaccgatgatgagtgtacctgtgttcagtaccaagaaagcgctgaagaaagtgaaaagc
ctcaagaagcaactcaccagagtgtgtctcggggaggtgttggagaaaattgatgtccag
gagtccttctatatgggggagaaacagaacaagttccgggtatacaagctgcggtttcag
ttcctgccgcacgtgtactaccagcaggagaagtgcatgaggcccgaggacatcttacgc
ttcatggaaaccagattctttaaaattctgatggaagccatcaggaagaagaacagtaaa
gcatcagctttcagaagtgtgaacacacggagagccacccagcgggatctagacaatgct
ggcgagtcggagaggagtcggggagagcaggagggcgacgaggaagaggaggggcacatt
gtggacgctgaagctgaggagggcgatgctgacgcctcggatgccaaacgcaaggaaaaa
caagaggaggaggtcgactacgacagcgaggaggaggaggaggaggaggaggagaaggaa
gacgaggagaaggaggacgaggacgttcaggaggaagggaccagcctcaaagaagacgtt
cagcaggagcaggaggaaggcggctgggcccccgaggagagctcgctccccggcgccccc
ctgatgcagccgcagaagcgcgcccgaagccgggagccacagggggccgaggcagtggag
cgccgggcacaggcggtgcgcgagtgccacccgttcatagaggactaccagtacgacaca
cagggcggcctgtggtgccaggtgacgctgaagctccctctcatgaaggtcaactttgac
atgagctccctggtagcatccttggcccaaggagctgtcatctatgcaaccaagggtatc
acaaggtgcctcctgaatgagaccaccaacagtaagaacgagaaggagcttgtcttaaac
acagaaggcatcaacctcccggagctgttcaagtacgccgaggtcctagatctgcgccgt
ctctattccaacgacatccatgccatggccagcacgtacggcatcgaggccgcactgcgc
gtgattgaaaaggagatcaaggacgtgtttgccgtatatggcatcgccgttgacccccgc
cacctctcgctggtggctgactacatgtgcttcgagggtgtttacaagccactgaaccgc
tttggcatccggtcaaactcctcaccactgcagcagatgacgtttgagaccagcttccag
tttctgaagcaggccaccctcctgggatcccatgatgaactgaggtccccatcagcctgc
ctcgtggtcgggaaggtcgtcaagggtgggaccggcctcttcgagctcaagcagccacta
agatag
DBGET
integrated database retrieval system
