Budorcas taxicolor (takin): 128071189
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Entry
128071189 CDS
T08909
Symbol
SCN1A
Name
(RefSeq) sodium channel protein type 1 subunit alpha
KO
K04833
voltage-gated sodium channel type I alpha
Organism
btax
Budorcas taxicolor (takin)
Pathway
btax04728
Dopaminergic synapse
Brite
KEGG Orthology (KO) [BR:
btax00001
]
09150 Organismal Systems
09156 Nervous system
04728 Dopaminergic synapse
128071189 (SCN1A)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
btax04040
]
128071189 (SCN1A)
Ion channels [BR:
btax04040
]
Voltage-gated cation channels
Sodium channel, voltage-gated (Nav)
128071189 (SCN1A)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ion_trans
Na_trans_cytopl
Na_trans_assoc
PKD_channel
GPHH
IQ
ATP-synt_B
FUT8_N_cat
Pns11_12
Motif
Other DBs
NCBI-GeneID:
128071189
NCBI-ProteinID:
XP_052520108
LinkDB
All DBs
Position
2:74544255..74636931
Genome browser
AA seq
2009 aa
AA seq
DB search
MEQTVLVPPGPDSFNFFTRESLAAIERRIAEEKAKNPKPDKKDDDEHGPKPNSDLEAGKN
LPFIYGDIPPEMVSEPLEDLDPYYINKKTFIVLNKGKAIFRFSATSALYILTPFNPLRKI
AIKILVHSLFSMLIMCTILTNCVFMTMSNPPDWTKNVEYTFTGIYTFESLIKIIARGFCL
EDFTFLRDPWNWLDFTVITFAYVTEFVDLGNVSALRTFRVLRALKTISVIPGLKTIVGAL
IQSVKKLSDVMILTVFCLSVFALIGLQLFMGNLRNKCVQWPPTNASLEEHTVEKNITKSY
NGTLVNETQNEFDWKSYIQDSRYHYFLEGFSDALLCGNSSDAGQCPEGYMCVKAGRNPNY
GYTSFDTFSWAFLSLFRLMTQDFWENLYQLTLRAAGKTYMIFFVLVIFLGSFYLINLILA
VVAMAYEEQNQATLEEAEQKEAEFQQMLEQLKKQQEAAQQAAAVTASEHSREPSTGGRLS
DSSSEASKLSSKSAKERRNRRKKRKQKEQSGGEEKDDDEFQKSESEDSIRRKGFRFSIEG
NRLTYEKRYSSPHQSLLSIRGSLFSPRRNSRTSLFSFRGRAKDVGSENDFADDEHSTFED
NESRRDSLFVPRRHGERRNSNLSQTSRSSRMLAVFPANGKMHSTVDCNGVVSLVGGPSVP
TSPVGQLLPEVIIDKPATDDNGTTTETEMRKRRSSSFHVSMDFLEDPSQRQRAMSIASIL
TNTVEELEESRQKCPPCWYKFSNIFLIWDCSPYWLKVKHIVNLVVMDPFVDLAITICIVL
NTLFMAMEHYPMTDHFNNVLTVGNLVFTGIFTAEMFLKIIAMDPYYYFQEGWNIFDGFIV
TLSLVELGLANVEGLSVLRSFRLLRVFKLAKSWPTLNMLIKIIGNSVGALGNLTLVLAII
VFIFAVVGMQLFGKSYKDCVCKINSECKLPRWHMNDFFHSFLIVFRVLCGEWIETMWDCM
EVAGQAMCLTVFMMVMVIGNLVVLNLFLALLLSSFSADNLAATDDDNEMNNLQIAVDRMH
KGIAYVKRKIYEFIQQSFVRKQKILDEIKPLDDLNNRKDNCMSNHTTEIGKDLDYLKDVN
GTTSGIGTGSSVEKYIIDESDYMSFINNPSLTVTVPIAVGESDFENLNTEDFSSESDLEE
SKEKLNESSSSSEGSTVDIGAPAEEQPVVEPEETLEPEACFTEGCVQRFKCCQISVEEGR
GKQWWNLRRTCFRIVEHNWFETFIVFMILLSSGALAFEDIYIDQRKTIKTMLEYADKVFT
YIFILEMLLKWVAYGYQTYFTNAWCWLDFLIVDVSLVSLTANALGYSELGAIKSLRTLRA
LRPLRALSRFEGMRVVVNALLGAIPSIMNVLLVCLIFWLIFSIMGVNLFAGKFYHCVNTT
TGDMFDISEVNNHSDCLILIERNETARWKNVKVNFDNVGFGYLSLLQVATFKGWMDIMYA
AVDSRNVELQPKYEESLYMYLYFVIFIIFGSFFTLNLFIGVIIDNFNQQKKKFGGQDIFM
TEEQKKYYNAMKKLGSKKPQKPIPRPGNKFQGMVFDFVTRQVFDISIMILICLNMVTMMV
ETDDQSDYVTSILSRINLVFIVLFTGECVLKLISLRHYYFTIGWNIFDFVVVILSIVGMF
LAELIEKYFVSPTLFRVIRLARIGRILRLIKGAKGIRTLLFALMMSLPALFNIGLLLFLV
MFIYAIFGMSNFAYVKREVGIDDMFNFETFGNSMICLFQITTSAGWDGLLAPILNSKPPD
CDPNKVNPGSSVKGDCGNPSVGIFFFVSYIIISFLVVVNMYIAVILENFSVATEESAEPL
SEDDFEMFYEVWEKFDPDATQFMEFEKLSQFAAALEPPLNLPQPNKLQLIAMDLPMVSGD
RIHCLDILFAFTKRVLGESGEMDALRIQMEERFMASNPSKVSYQPITTTLKRKQEEVSAV
IIQRAYRRHLLKRTVKQASFTYNKNKIKGGANLLAKEDMIIDRINENSITEKTDLTMSTA
ACPPSYDRVTKPIVEKHEQEGKDEKAKGK
NT seq
6030 nt
NT seq
+upstream
nt +downstream
nt
atggagcaaacagtgcttgtaccaccaggacctgacagcttcaacttcttcaccagagaa
tcccttgcggctattgaaagacgcattgcagaagaaaaggctaagaatcccaaaccagac
aagaaagacgacgatgaacatggcccaaagccaaatagtgacttggaagccggaaagaac
cttccttttatttatggagacatccctccagagatggtgtcagagccactggaggacctg
gatccctactatatcaataagaaaacttttatagtattgaataaagggaaggccatcttc
cggttcagtgccacctctgccctgtacattttaactcccttcaatcctcttaggaaaata
gctattaagattttggtacattcattattcagcatgctaattatgtgcactattttgaca
aactgtgtgtttatgacaatgagcaaccctcccgactggacaaagaatgtagagtacacc
ttcacaggaatatatacttttgaatcacttataaaaattattgcaaggggcttctgttta
gaagattttactttccttcgagacccatggaactggcttgacttcactgtcattacattt
gcatacgtgacagagtttgtggacctgggcaatgtctccgcattgagaacgttcagagtt
ctccgagcgctgaaaaccatttcagtcattccaggtctgaaaaccattgtgggggccctg
atccagtctgtgaaaaagctctcagatgtcatgatcctaactgtgttctgtctgagtgtg
tttgccctgattgggctgcagctctttatgggcaacctgcggaataaatgtgtacaatgg
cctcccaccaatgcttccctggaggaacacactgtagagaagaacataactaagagttac
aatggcacacttgtaaacgaaactcaaaatgagtttgactggaagtcatatattcaagat
tcaagatatcactattttctggagggtttttcagatgcactattatgtggaaatagctca
gatgcaggccaatgtccagaaggatacatgtgtgtgaaagctggtagaaatcccaattat
ggctacacaagctttgatactttcagttgggcttttttatcgctgtttcgactgatgact
caggacttctgggaaaatctttaccagctgacgctgcgtgctgctgggaaaacatacatg
atattttttgtgctggtcattttcttgggctccttctatctaataaatttgatcctggct
gtggtggccatggcctatgaggaacagaatcaggcaacgctggaagaggcggagcagaaa
gaggctgaatttcagcagatgctcgaacagcttaaaaagcaacaggaggcagctcagcag
gcagcagctgtaactgcctcggagcattccagagaacctagtacaggaggcagactctca
gacagctcatctgaagcctccaagttgagttccaagagtgcaaaggaaagaagaaatcgg
agaaagaaaagaaaacagaaagagcaatctggtggagaagagaaagatgatgatgaattc
cagaaatctgaatctgaagacagcatcaggaggaaagggtttcgcttctccatagaaggg
aatcggttgacatatgaaaagaggtactcctccccacaccagtctttgttgagcatccgt
ggctccttattttctccaaggcgaaatagcagaacaagccttttcagcttcagagggcga
gcaaaggatgtgggatcagagaacgactttgctgatgatgagcacagcaccttcgaggat
aacgagagccgcagagactccttatttgtgccccgacggcatggagagcgacgcaacagt
aacttgagtcagaccagtaggtcgtcccgaatgctggccgtgtttccagccaatgggaag
atgcacagcactgtggattgcaatggtgtggtttccttggttggtggaccttcggttcct
acatcgcctgttggacagcttctgccagaggtgataatagataagccagctactgatgac
aatggaacaaccactgaaactgaaatgagaaagagaaggtcaagttcttttcatgtttcc
atggactttctagaagatccatctcagaggcaaagagcaatgagcatagccagcatttta
acaaatacagtagaagaacttgaagaatccaggcagaaatgcccaccctgttggtataaa
ttttccaacatattcttaatctgggactgttcgccatattggttaaaagtgaaacatatt
gtcaacctggttgtgatggacccttttgttgacctggccatcaccatctgcattgtctta
aataccctcttcatggccatggagcactatcctatgacagatcatttcaataatgtgctt
acagtaggaaacttggttttcactgggatctttacagcagaaatgtttctgaaaattatt
gccatggatccttactattatttccaagaaggctggaatatctttgatggttttattgta
acgcttagcctggtagaacttggcctggccaacgtggaaggattatcagttctccgttca
ttccgtttgctccgagttttcaaattggcaaaatcttggccaacattaaatatgctaata
aagatcattggcaattcagtgggggccctgggaaatctgaccttggtgttggccatcatc
gtcttcatttttgctgtggttggcatgcagctctttggtaaaagttacaaagattgtgtc
tgcaagatcaacagtgagtgtaagctccctcgctggcacatgaacgacttcttccactcc
ttcctgattgtgttccgggtgctgtgtggagagtggatagagaccatgtgggactgcatg
gaggtcgccgggcaagccatgtgcctgactgtcttcatgatggtcatggtcattggaaac
ctggtggtcctgaacctctttttggccttgcttctgagctcatttagtgcagacaacctt
gcggccactgatgatgataatgaaatgaacaatctccaaattgctgtggataggatgcac
aagggaatagcttatgtgaagagaaaaatatatgaatttattcaacagtcctttgttaga
aaacaaaagattttagatgaaattaaaccacttgatgatctaaacaacaggaaagacaat
tgtatgtccaatcatacaacagagattgggaaagatcttgactatcttaaagacgtaaat
ggaaccacaagtggaataggaaccggcagcagtgttgaaaagtacattattgatgaaagt
gattacatgtccttcataaacaatcccagtcttactgtgactgtaccaattgctgtagga
gaatctgactttgaaaatttaaacacagaggacttcagtagtgaatcagatctggaagaa
agcaaagagaagcttaatgaaagcagtagttcatctgaaggtagcactgtggacattgga
gcacctgccgaggaacagcctgtagtggaacccgaggaaacccttgaacctgaagcctgt
tttactgaaggctgtgtgcaaagattcaaatgttgtcaaatcagtgtggaagaagggaga
ggaaaacaatggtggaatctgagaagaacgtgtttccgaatagttgaacataactggttt
gagaccttcattgttttcatgattctccttagcagtggtgcactggcatttgaggatata
tatattgaccagcgaaagacgatcaaaacaatgttggaatatgctgacaaggttttcact
tatattttcattctggaaatgcttctaaaatgggtggcatatggctatcaaacatatttc
accaatgcctggtgttggctagacttcttaattgttgatgtttcattggtcagtttaaca
gcaaatgccttgggttactcagaacttggtgccatcaaatctctcaggacactaagagct
ctgagacctctaagagccttatcacgatttgaagggatgagggtggttgtgaatgccctt
ttaggagcaattccatccatcatgaatgtacttctggtttgtcttatattctggctaatt
ttcagcatcatgggcgtaaatttgtttgctggcaaattctaccactgtgttaacaccaca
actggtgacatgtttgacatcagcgaagtgaataatcattctgattgcctaatactaata
gaaagaaatgagactgctcgctggaaaaatgtgaaagtaaactttgataatgtaggattt
gggtatctctctttgcttcaagttgccacatttaagggatggatggatataatgtatgca
gcagttgattccagaaatgtggaactccagcctaagtatgaggaaagtctatacatgtat
ctttactttgttattttcatcatctttgggtccttctttaccttgaacctgtttattggt
gtcatcatagataatttcaaccagcagaaaaagaagtttggaggtcaagacatctttatg
acagaagaacagaagaaatactataatgcaatgaaaaaattaggatcaaaaaagccacag
aagcctatacctcgaccaggaaacaaattccaaggaatggtctttgattttgtcaccagg
caagtttttgacatcagcatcatgattcttatctgtctcaacatggtcaccatgatggtg
gagacggacgaccagagtgactatgtgactagcattttgtcacgcatcaacttggtgttc
attgtgctgttcactggagagtgtgtgctgaagctcatctccctccgccattactatttt
accataggctggaatatctttgattttgtggtggtcattctctccatagtaggtatgttt
ctggctgagctgatagagaaatattttgtgtcccctaccttgttccgagtgatccgtctt
gccaggattggccgaatcctgcgtctgatcaaaggggccaaggggatccgaacactgctc
tttgctttgatgatgtcccttcctgcgctgtttaacatcggcctcctgctcttcctggtc
atgttcatctatgccatctttggaatgtccaactttgcctatgttaagagggaggttgga
attgatgacatgttcaactttgagaccttcggcaacagcatgatctgcctgttccagatt
accacctctgctggctgggatgggttgttagcacctatcctcaacagtaaaccacccgat
tgtgaccctaataaagttaaccctggcagctcagttaaaggagactgtggaaacccgtct
gttgggattttcttctttgtcagttacatcatcatatcatttctggtcgtggtgaacatg
tacattgctgtcatcctggagaacttcagtgttgctactgaagaaagtgcagagcccctg
agtgaggacgactttgagatgttctacgaggtttgggagaagtttgatcccgacgccacc
cagttcatggaatttgaaaagctatctcagtttgcagctgctcttgaaccaccactcaat
ttaccacaaccgaacaaactccagctcattgccatggatttgcccatggtaagtggtgat
cgaatccactgtcttgacatcttatttgcttttacgaagcgggttcttggggagagtgga
gagatggatgcccttcgaatacagatggaagagagattcatggcctccaacccatcgaag
gtctcctatcagccaataacgacaactttaaagcgaaaacaagaggaagtgtctgctgtt
attattcagcgtgcctacaggcgccaccttttaaagcgaactgtaaaacaggcatcattt
acgtacaacaaaaataaaatcaaaggtggggctaatcttcttgcaaaagaagacatgata
attgacagaataaatgaaaactcaattacagaaaaaactgatctgaccatgtccacagca
gcttgtccaccctcctatgatcgggtaacaaaaccaattgtggaaaagcacgagcaagaa
ggcaaagatgaaaaagccaaagggaaataa
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integrated database retrieval system
