Bombus terrestris (buff-tailed bumblebee): 100647842
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Entry
100647842 CDS
T04364
Name
(RefSeq) probable DNA mismatch repair protein Msh6
KO
K08737
DNA mismatch repair protein MSH6
Organism
bter
Bombus terrestris (buff-tailed bumblebee)
Pathway
bter03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
bter00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
100647842
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
bter03400
]
100647842
DNA repair and recombination proteins [BR:
bter03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
Mismatch and loop recognition factors
100647842
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MutS_V
MutS_III
MutS_I
MutS_IV
MutS_II
AAA_22
Motif
Other DBs
NCBI-GeneID:
100647842
NCBI-ProteinID:
XP_003395049
UniProt:
A0A9B0C9C0
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Position
LG B04:complement(8367553..8372946)
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AA seq
1130 aa
AA seq
DB search
MSKVNTLYNYFISPKTPKTPKQSNNKKPDEKPSTPKRPREQWNKAKIPSKGKENIDVKDK
RNVSKDDDDEEEEKEEKEPVQPKRRRLIIPDEESGEDSGDEFKPDPEDESEDSDSVSEEV
SESEPLTPSEEESPEKKIKLAKAPRGKREISTMKNTKDVKKESKPQQQNQTKGSDSVTES
WPHLKYDFLQPNKIRDIRRKPPSDPDYDPKTLYVPQDFLNQQTPAMRQWWELKSKHFDCV
LFFKVGKFYELYHMDAVISVNEINLTYMRGEFAHSGFPEIGYGRFSASLIERGYKVARVE
QTENPDMMAQRCSKMTRPTKFDKVVKREICQISSKGTRVYTPQDVEASTANSNYLLSLVE
KCPSGSNKSHYGVCFLDTTIGDFYLGQFEDDRCNSRILTLLAHYPPVHVVYERGNLSQKT
LKILNNTLAACIKEPLLRESQFWSSSTTLKNLHEGEYFKNSDSQFQWPAGLQPYLNQNDT
LGLTSADDKELAVHALGGCVYLLKEYLLEQQLLAQGRFKTYTPPDFSNEKSVASNFANNM
VLDAITINNLRIFGEGSLMKTLDRCCTAFGKRLLREWICRPSCRKNVIIERQQAIQELMD
NTEVMQNARSILAGLPDLERLLSKIHAQGNAAKMNNHPDGRAIMFEGQTYSKKKIADFIV
TLNAFENVLKIVALFEDFKSTIVSRCTKIEPDGEFPSLRESLDYFKTAFDHEEAKKVGCV
VPKRGVDSEYDSVLIELDDVKADAQQYLEKQKKHFGVKVAFHGSDKKRYQIEIPDSQIKK
IGAGYELQSQRKGYKRYYTAETKELLSRQINAEEHRDKVLKDLNRRIFAKFSEKYDMWNM
AVYKLSVLDVLISLAEYALSGDMCIPEVNDGTDKRVFIDIRDGWHPCIISDTFIPNNTLL
GTENSASFMILTGPNMGGKSTLMRQVALLTIMTQIGSYVPASSCCLTLVDRIFTRLGAND
DILAGQSTFLVELSETSAILQHATPYSLVLLDELGRGTSTYDGTAIAASVVNALTKLNCR
TLFSTHYHSLVEDYKNTKEITLAHMACMVENEEQDEVSQETVTFLYKLSEGACPKSYGFN
AARLAGVPSVITNRAHEISKKLEQETNYKHLFTSLCKANGTAIRDLIAAM
NT seq
3393 nt
NT seq
+upstream
nt +downstream
nt
atgtctaaagtgaatacattgtacaattattttatttcgcctaaaactcctaaaactcct
aaacaatcgaataataagaagcctgatgaaaaacctagtacgccgaaaagaccaagagaa
caatggaacaaagcaaagattccaagcaaagggaaagaaaatatagatgtcaaagataaa
agaaatgtctctaaagatgatgatgatgaagaagaggaaaaggaagaaaaggaaccggta
cagccaaaaaggcgaagattgattatccctgatgaagagtctggagaagattctggtgat
gaatttaagcctgatccagaagatgaatcagaagattctgattcagtatctgaagaagtt
agtgaaagtgagccactaacaccaagtgaagaggaatctccagagaagaaaataaaattg
gctaaagctcctagaggaaaacgggaaataagtacaatgaaaaataccaaagatgttaaa
aaagaatcaaaaccacagcaacaaaatcaaaccaaaggttcggacagtgttacagaatct
tggccacatttaaagtatgatttccttcaaccaaataaaatacgagatattcgtagaaaa
ccaccaagcgatccagattatgatcctaaaactctttatgttcctcaggatttcttgaat
caacaaactccagccatgagacaatggtgggaattaaaaagcaaacatttcgattgcgtt
cttttctttaaagtaggaaagttttatgaattgtatcatatggatgctgtaattagtgtc
aatgaaattaatcttacatacatgagaggagaatttgcgcattcaggatttccagaaatt
ggatatggtcgtttctcagcaagtctcatagaaagaggctacaaagtggctagggtagaa
caaacagaaaatccagacatgatggcgcaacgttgtagcaaaatgactaggccaacaaag
ttcgacaaagtagttaaacgagaaatttgtcaaataagcagtaaaggtacaagagtatac
actccacaggatgtagaagcatctacggcaaattccaattatttgttatcattagttgaa
aaatgtccatctggttcaaacaaatctcattatggagtgtgtttcttagatactacaata
ggagacttctatctcggtcaattcgaagacgatcgatgtaattctagaatactaacttta
ctcgctcattatccgccggttcatgtggtttatgaacgaggtaatttgtctcaaaagacc
ctaaaaatcttaaacaacactttagcagcgtgtattaaagaaccacttttacgcgaatct
caattttggtcatcttcgactacgttaaaaaatcttcatgaaggagaatacttcaaaaat
tcagactctcagtttcaatggcctgcaggtttacaaccatatcttaatcaaaatgatact
ttaggtttaacttctgctgatgataaagagttagcggtgcatgccttaggtggatgtgta
tacttactcaaagaatatctgcttgaacagcaattattggcgcaaggacgttttaaaaca
tatactccgccagatttttcaaatgagaaatctgtggcttcaaactttgcgaataatatg
gttctagatgctattacgattaataatttgagaatattcggcgaaggttctctcatgaaa
acactggatcgttgctgtactgcattcgggaagaggttattgcgagaatggatttgcaga
ccatcctgtcgcaaaaacgttataatcgaacgtcaacaagctatacaagaattaatggat
aatacagaggtgatgcaaaatgctcgtagtatattagcaggactccctgatcttgaaaga
ttattaagcaagatccatgcacaaggaaatgcggcgaaaatgaataatcatccagatggc
agagcgattatgttcgagggtcaaacgtattcaaagaaaaagattgcagattttattgtt
actttgaatgcgttcgagaatgttctaaaaattgttgctttgttcgaagatttcaagagt
actatagtaagtcgatgtactaaaatagagccggatggcgagtttccttcattaagagaa
tcattagattattttaagaccgcattcgatcacgaagaagccaaaaaagtaggctgtgtt
gttccaaagagaggagtcgatagtgagtacgactctgttttaatagaattggatgatgta
aaggcagatgcccaacagtaccttgaaaagcaaaaaaagcacttcggcgtgaaagtcgcg
tttcatggatcggataagaaacgttatcaaatcgagattccagattctcaaataaagaaa
attggtgccgggtatgagcttcaatcacaaagaaaaggatacaaacgctattacactgcc
gagactaaggaacttttgagtcgacaaataaacgccgaagaacacagagataaagtacta
aaggatttaaacagaagaatatttgcaaaatttagcgagaagtatgatatgtggaatatg
gcggtttataagttgtctgtcttggatgttcttatctctttggcggaatatgctctcagc
ggagatatgtgtataccagaagttaacgatggtacagataaaagggtatttatcgatatt
cgagacggatggcatccatgtattatctccgatacatttataccaaataacactttacta
ggaactgaaaattctgcttcttttatgattcttactggaccgaatatgggtggtaaatca
acattgatgcgtcaggtcgcccttcttactataatgacgcaaattggaagttacgtccct
gcaagttcctgctgtttgacattagtggatcgtattttcacaaggctcggcgcaaatgat
gatattctagctggccagagtacgttcttggtagagttgagcgaaacttctgcgatatta
cagcacgctacgccatactcgctagtgttgcttgatgaattgggtcgtggtacgtcgacg
tatgacggcacggcaatagccgcttcagttgtgaatgcacttacaaaattgaattgccgt
actctattttcgacacattatcattctttggtagaagattataagaacacaaaggaaatt
acattggcccatatggcatgtatggtagaaaatgaggaacaggatgaagtgtctcaggaa
acagtaacatttttgtacaaacttagcgagggagcttgtccgaaatcatatggttttaac
gctgctcgattagctggcgtcccatctgtaattacaaacagagcgcatgagatctcaaag
aaactcgaacaagagacaaattataaacatctcttcaccagtctatgtaaggcgaacgga
acagccataagggatctaatcgctgcaatgtga
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