KEGG   Bombus terrestris (buff-tailed bumblebee): 100652323
Entry
100652323         CDS       T04364                                 
Name
(RefSeq) DNA-directed RNA polymerase II subunit RPB9
  KO
K03017  DNA-directed RNA polymerase II subunit RPB9
Organism
bter  Bombus terrestris (buff-tailed bumblebee)
Pathway
bter03020  RNA polymerase
bter03420  Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:bter00001]
 09120 Genetic Information Processing
  09121 Transcription
   03020 RNA polymerase
    100652323
  09124 Replication and repair
   03420 Nucleotide excision repair
    100652323
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:bter03021]
    100652323
   03400 DNA repair and recombination proteins [BR:bter03400]
    100652323
Transcription machinery [BR:bter03021]
 Eukaryotic type
  RNA polymerase II system
   RNA polymerase II
    Pol II specific subunits
     100652323
DNA repair and recombination proteins [BR:bter03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    TCR (transcription coupled repair) factors
     DNA-directed RNA polymerase II complex
      100652323
SSDB
Motif
Pfam: TFIIS_C RNA_POL_M_15KD Zn_ribbon_recom Ogr_Delta CpXC DUF4892 TF_Zn_Ribbon DZR
Other DBs
NCBI-GeneID: 100652323
NCBI-ProteinID: XP_003399854
UniProt: A0A9B0C1Y1
LinkDB
Position
LG B12:12215789..12216712
AA seq 130 aa
MSKIGGYDTHDDGPGFVGIRFCQECNNMLYPKEDKENKVLMYACRNCDFKQLADSNCIYV
NKIMHEIDELTHIVADVISDPTLPRTEEHPCPKCNHREAVFFQAQTRRAEEEMRLYYVCT
NQHCSHRWTE
NT seq 393 nt   +upstreamnt  +downstreamnt
atgtctaaaataggtggttatgatacccacgatgatggtccaggtttcgtcggcattaga
ttttgtcaagaatgtaataacatgttatatccaaaagaagataaggagaataaagtacta
atgtacgcatgcagaaattgtgatttcaaacaacttgctgatagcaattgtatctacgta
aataaaattatgcacgaaatagacgagttgacacacattgttgcggatgtcatatcagac
cctactttaccaagaaccgaagaacatccatgtccaaagtgtaaccacagagaagcagta
ttctttcaagcacagacaaggcgagcagaagaagaaatgagattatattatgtgtgtact
aaccaacattgttctcataggtggacagaatga

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