KEGG   Bordetella trematum: SAMEA390648700691
Entry
SAMEA390648700691 CDS       T04322                                 
Symbol
ribD
Name
(GenBank) riboflavin biosynthesis protein [includes diaminohydroxyphosphoribosylaminopyrimidine deaminase and 5-amino-6-(5-phosphoribosylamino)uracil reductase
  KO
K11752  diaminohydroxyphosphoribosylaminopyrimidine deaminase / 5-amino-6-(5-phosphoribosylamino)uracil reductase [EC:3.5.4.26 1.1.1.193]
Organism
btrm  Bordetella trematum
Pathway
btrm00740  Riboflavin metabolism
btrm01100  Metabolic pathways
btrm01110  Biosynthesis of secondary metabolites
btrm01240  Biosynthesis of cofactors
btrm02024  Quorum sensing
Brite
KEGG Orthology (KO) [BR:btrm00001]
 09100 Metabolism
  09108 Metabolism of cofactors and vitamins
   00740 Riboflavin metabolism
    SAMEA390648700691 (ribD)
 09140 Cellular Processes
  09145 Cellular community - prokaryotes
   02024 Quorum sensing
    SAMEA390648700691 (ribD)
Enzymes [BR:btrm01000]
 1. Oxidoreductases
  1.1  Acting on the CH-OH group of donors
   1.1.1  With NAD+ or NADP+ as acceptor
    1.1.1.193  5-amino-6-(5-phosphoribosylamino)uracil reductase
     SAMEA390648700691 (ribD)
 3. Hydrolases
  3.5  Acting on carbon-nitrogen bonds, other than peptide bonds
   3.5.4  In cyclic amidines
    3.5.4.26  diaminohydroxyphosphoribosylaminopyrimidine deaminase
     SAMEA390648700691 (ribD)
SSDB
Motif
Pfam: RibD_C dCMP_cyt_deam_1 MafB19-deam Inv-AAD Flu_M1
Other DBs
NCBI-ProteinID: SAI67319
UniProt: A0A157QHJ8
LinkDB
Position
1:complement(736135..737292)
AA seq 385 aa
MPEASFQDVEWMRRALALAQGVIHTTSPNPRVGCVIVRDGQVLGEGATQPPGGPHAEVMA
LRAAQAAGHALAGATVYVTLEPCSHFGRTPPCADALVAAAPARVVVALGDPNPSVAGKGC
ARLRAAGIRVTQGVCEEEALALNAGFVARMSRGTPWAWLKLAASLDGRSALHNGASQWIT
GPQARADGHAWRARADVVLTGIGTVLHDDPRLNVREVATPRQPRKALVDAQLRVSPQARL
FDDGPAWVFTAVKDADRTARLAERQAEVICLPDAGGQRVDLAAMMRWLAARDCNEVHVEA
GAGLSGALFEAGCIDALLVYLAPVLLGDAAGMLNLPALHSLEGVRRFAFTDMVPVGGDVR
LLARDPVRWQALLDSTRQALARPSL
NT seq 1158 nt   +upstreamnt  +downstreamnt
atgcctgaagccagtttccaagatgtcgaatggatgcgtcgcgccctggcgctggcgcag
ggcgtgatccacaccacttcgcccaacccccgggtcggctgcgtgatcgtgcgcgatggc
caggtgctgggcgagggcgccacccagccgccgggcggtccgcatgccgaggtcatggcg
ctgcgcgccgcgcaggccgccgggcatgcgctggcgggcgccaccgtctatgtcacgctt
gaaccctgcagccatttcggccgcacgccgccttgcgccgatgcgctggtggccgcggcg
cctgcgcgcgtggtggtcgcgctgggcgaccccaatcccagcgtggccggcaagggctgc
gcgcgtctgcgcgcagccggcattcgcgtcacgcaaggcgtatgcgaagaagaggccctg
gccctgaacgccggcttcgtggcccgcatgagccgcgggaccccctgggcgtggctcaag
ctggctgcctcgctcgatggtcgcagcgccctgcacaatggcgcatcgcagtggatcacc
ggccctcaggcgcgggccgacggccatgcctggcgagcgcgggccgatgtggtgctgacc
ggcatcggcactgtgctgcacgacgacccgaggctgaacgtgcgcgaggtggctacgccg
cgccagccgcgcaaggcgctggtcgatgcgcagctgcgcgtgtcgccccaggcgcgcctg
ttcgacgatgggccggcctgggtcttcacggcggtgaaggatgcggacaggacggcgcgt
ctggccgagcgtcaggccgaggtgatctgtctgcccgatgccggcggacagcgtgtcgat
ctggcggcgatgatgcgctggctggctgcccgggattgcaatgaggttcacgtggaagcc
ggcgccggtctgtcgggcgcgctgttcgaggccggttgcatcgatgcgctgctggtatat
ctggcgcccgtgctgctgggcgatgccgcggggatgttgaatctgcccgcgctgcacagc
ctggagggcgtgcggcgctttgcgtttaccgacatggtgccggtaggcggggatgtgcgt
ttgctggcccgggacccggtgcgctggcaggcgctgttggacagtacccgccaggccctg
gcgcggccgtccctttag

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