Bordetella trematum: SAMEA390648701458
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Entry
SAMEA390648701458 CDS
T04322
Symbol
rimO
Name
(GenBank) ribosomal protein S12 methylthiotransferase
KO
K14441
ribosomal protein S12 methylthiotransferase [EC:
2.8.4.4
]
Organism
btrm
Bordetella trematum
Brite
KEGG Orthology (KO) [BR:
btrm00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
btrm03009
]
SAMEA390648701458 (rimO)
Enzymes [BR:
btrm01000
]
2. Transferases
2.8 Transferring sulfur-containing groups
2.8.4 Transferring alkylthio groups
2.8.4.4 [ribosomal protein uS12] (aspartate89-C3)-methylthiotransferase
SAMEA390648701458 (rimO)
Ribosome biogenesis [BR:
btrm03009
]
Prokaryotic type
ribosomal protein modification factors
SAMEA390648701458 (rimO)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Radical_SAM
TRAM_2
UPF0004
CLP1_P
TRAM
DUF5005
Motif
Other DBs
NCBI-ProteinID:
SAI68725
UniProt:
A0A157SE66
LinkDB
All DBs
Position
1:complement(1534519..1535874)
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AA seq
451 aa
AA seq
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MGDLLKSKSMNAKDHTPRVGFVSLGCPKALVDSERILTQLRTEGYQVTPEYHDADVVVVN
TCGFIDSAKAESLEAIGEALAENGKVIVTGCMGVEESAIRQVHPSVLAVTGPQQYEEVVR
AVHGVAPPRQDHNPYVDLVPPQGVKLTPRHYAYLKISEGCNHRCSFCIIPSMRGDLVSRP
VGDVLNEAERLVRAGVKELLVISQDTSAYGVDVKYRSGFWNGRPVKTRMTELCDALSSLG
VWTRLHYVYPYPHVDEVIPLMAEGKVLPYLDIPFQHASPRILKAMKRPAFEDKTLARIRK
WRETCPDLTIRSTFIVGFPGETEDDFQYLLDWMSEAQLDRVGCFQYSPVEGAPANTLADP
VPDEVKQERWERFMEHQQAISAQRLQARVGREIEVLIDEVDEDGAVGRSSADAPEIDGCV
YVSSEQPLKPGDLVRARVTDADEYDLWADRL
NT seq
1356 nt
NT seq
+upstream
nt +downstream
nt
atgggcgacctcctgaaaagcaaatccatgaacgctaaagaccacactccgcgcgtgggg
ttcgtctcactcggctgccccaaggccctggtcgactccgagcgcatcctgacccagctc
cgcaccgagggctatcaagtcacgcccgagtaccacgacgccgatgtggtggtcgtcaat
acctgtggcttcatcgacagcgccaaggccgagtcgctggaggccatcggcgaagccctg
gccgagaacggcaaggtcatcgtcaccggctgcatgggggtcgaggaatcggccatccgc
caggtgcatcccagcgtgctggccgtgaccgggccgcagcagtacgaggaagtggtgcgc
gccgtgcacggggtagctcccccgcgccaggatcacaatccctacgtggacctggtgccg
ccgcaaggcgtgaaactcacgccgcgccactatgcctacctgaagatttccgagggctgc
aatcaccgttgcagcttctgcatcatcccctcgatgcgcggtgatctggtcagccgtccg
gtgggcgatgtgctcaacgaggccgagcgcctggtgcgcgccggcgtgaaggaactgctg
gtgatctcgcaggacaccagcgcctatggcgtggacgtgaagtaccgcagcggcttctgg
aacggccggccggtcaagacccgcatgacggaactgtgcgacgcgctctccagtctgggc
gtatggacccgcctgcactatgtctatccctacccgcacgtcgacgaggtcatcccgctg
atggccgagggcaaggtgctgccctacctggacatccccttccagcacgccagcccgcgc
atcctcaaggccatgaaacgcccggccttcgaagacaagacgctggcgcgcattcgcaag
tggcgcgagacctgtccggacctgaccatccgctcgaccttcatcgtcggcttccccggc
gaaaccgaagacgacttccaatacctgctggactggatgagcgaggcgcagctcgatcgc
gtgggctgtttccagtattcgccggtcgaaggcgcgccggccaacaccctggcggacccc
gtgcccgacgaggtcaagcaagagcgctgggagcgcttcatggagcaccagcaggcaatc
tccgcgcagcgcctgcaggcgcgcgtgggccgcgagatcgaggtcttgatcgatgaggtc
gacgaggatggcgccgtgggccgctccagcgccgatgctcccgagatcgacggctgtgtg
tatgtctccagcgagcagccgctcaagccgggcgatctggtgcgcgcccgcgtgaccgac
gccgacgaatacgatctctgggccgaccgtctctga
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