Bordetella trematum: SAMEA390648703840
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Entry
SAMEA390648703840 CDS
T04322
Symbol
hldD
Name
(GenBank) ADP-L-glycero-D-manno-heptose-6-epimerase
KO
K03274
ADP-L-glycero-D-manno-heptose 6-epimerase [EC:
5.1.3.20
]
Organism
btrm
Bordetella trematum
Pathway
btrm00540
Lipopolysaccharide biosynthesis
btrm01100
Metabolic pathways
btrm01250
Biosynthesis of nucleotide sugars
Module
btrm_M00064
ADP-L-glycero-D-manno-heptose biosynthesis
Brite
KEGG Orthology (KO) [BR:
btrm00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00540 Lipopolysaccharide biosynthesis
SAMEA390648703840 (hldD)
09180 Brite Hierarchies
09181 Protein families: metabolism
01005 Lipopolysaccharide biosynthesis proteins [BR:
btrm01005
]
SAMEA390648703840 (hldD)
Enzymes [BR:
btrm01000
]
5. Isomerases
5.1 Racemases and epimerases
5.1.3 Acting on carbohydrates and derivatives
5.1.3.20 ADP-glyceromanno-heptose 6-epimerase
SAMEA390648703840 (hldD)
Lipopolysaccharide biosynthesis proteins [BR:
btrm01005
]
Core region
SAMEA390648703840 (hldD)
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Epimerase
GDP_Man_Dehyd
RmlD_sub_bind
3Beta_HSD
NAD_binding_4
Polysacc_synt_2
Ldh_1_N
Motif
Other DBs
NCBI-ProteinID:
SAI73771
UniProt:
A0A146A786
LinkDB
All DBs
Position
1:complement(4104218..4105207)
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AA seq
329 aa
AA seq
DB search
MIVVTGAAGFIGSNLVRGLNRRGIHDILAIDDLTQGDKFLNLVDCRIADYMHHEDARERL
RAGTLPKLRAVLHQGACSDTTERDGRYMMDNNYRVTLEWFEYCQAQRVPFLYASSAAVYG
ASSVYVEDPANEGPLNVYGYSKLLFDQVLRTRMDRLTAQVVGLRYFNVYGPHEQHKGRMA
SVAFHNMNQFLAEGHVRLFEGWDGYANGGQSRDFISVEDVVAVNLHFLDHPDVSGIFNCG
TGRAQPFNDVAVAVVNSLRAERGEAALPLEALVEQGLIRYIPFPDDLKGRYQSFTQANVD
SLRAAGFDAPMRDVQAGVSEYVRYWRARK
NT seq
990 nt
NT seq
+upstream
nt +downstream
nt
atgattgtggtgactggcgcagccggtttcatcggcagcaacctggtgcgcgggctcaac
cgccgtggcatccatgacatcctcgccatcgacgacctcacccagggtgacaaattcctc
aatctggtcgattgccggatcgccgactacatgcatcacgaggatgcgcgcgagcgtctg
cgcgccggcacgctgcccaagctgcgcgccgtgctgcatcagggcgcctgctcggatacc
accgagcgcgatggccgctacatgatggacaacaattaccgcgtcaccctcgaatggttc
gagtactgccaggcgcagcgcgtgccgtttctgtatgcctcgtcggcggccgtctacggg
gcttcgtccgtctacgtcgaagacccggccaacgaaggtccgctcaatgtctatggttat
tccaagctgctgttcgatcaggtgctgcgcacccggatggatcgcctgacggcccaggtg
gtgggcctgcgttatttcaacgtctacggtcctcatgagcagcacaagggccgcatggcc
tctgtggctttccacaacatgaaccagttcctcgccgagggccatgtgcgcctgttcgag
ggttgggacggctacgccaacggtgggcagagccgcgacttcatttcggtggaggacgtg
gtggccgtcaatctgcattttctcgatcatccggacgtctccggcatcttcaactgcggc
accgggcgggcccagccgttcaatgatgtggccgtcgcggtggtcaacagcctgcgtgca
gaacgtggcgaggctgcgctgccgcttgaggcgctggtcgagcagggactgatccggtac
atccccttcccggatgacctgaagggtcgttatcagagctttacgcaggccaatgtggac
agcctgcgcgcggccggattcgatgcgcccatgcgcgacgtgcaggccggcgtcagcgag
tacgtgcgctactggcgcgcgcgcaagtag
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