Burkholderia ubonensis: BW23_681
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Entry
BW23_681 CDS
T03794
Symbol
rfaD
Name
(GenBank) ADP-glyceromanno-heptose 6-epimerase
KO
K03274
ADP-L-glycero-D-manno-heptose 6-epimerase [EC:
5.1.3.20
]
Organism
bub
Burkholderia ubonensis
Pathway
bub00540
Lipopolysaccharide biosynthesis
bub01100
Metabolic pathways
bub01250
Biosynthesis of nucleotide sugars
Module
bub_M00064
ADP-L-glycero-D-manno-heptose biosynthesis
Brite
KEGG Orthology (KO) [BR:
bub00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00540 Lipopolysaccharide biosynthesis
BW23_681 (rfaD)
09180 Brite Hierarchies
09181 Protein families: metabolism
01005 Lipopolysaccharide biosynthesis proteins [BR:
bub01005
]
BW23_681 (rfaD)
Enzymes [BR:
bub01000
]
5. Isomerases
5.1 Racemases and epimerases
5.1.3 Acting on carbohydrates and derivatives
5.1.3.20 ADP-glyceromanno-heptose 6-epimerase
BW23_681 (rfaD)
Lipopolysaccharide biosynthesis proteins [BR:
bub01005
]
Core region
BW23_681 (rfaD)
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Ortholog
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GFIT
Motif
Pfam:
Epimerase
GDP_Man_Dehyd
RmlD_sub_bind
3Beta_HSD
NAD_binding_4
Polysacc_synt_2
NAD_binding_10
KR
Motif
Other DBs
NCBI-ProteinID:
AJX17809
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All DBs
Position
I:complement(743380..744372)
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AA seq
330 aa
AA seq
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MTLIVTGAAGFIGANLVKALNERGETRIIAVDNLTRADKFRNLVDCEIDDYLDKTEFVER
FARGDFGKVRAVFHEGACSDTMEHDGRYMMDNNFRYSRAVLDACLAQGAQFLYASSAATY
GGSTRFVEEREVEAPLNVYGYSKFLFDQVVRRVLPSAKSQIAGFRYFNVYGPRETHKGRM
ASVAFHNFNQFRAEGKVKLFGEYNGYAPGEQTRDFVSVEDVAKVNLFFFDHPEKSGIFNL
GTGRAQPFNDVATSVVNTLRALDNLPPLTLAQQVEQGLIEYVPFPDALRGKYQCYTQADQ
TKLRAAGYDAPFLTVQEGVDRYVRWLSGQV
NT seq
993 nt
NT seq
+upstream
nt +downstream
nt
atgaccctcatcgtcaccggcgcagccggtttcatcggcgcgaatctcgtcaaggcgctt
aacgagcgcggcgaaacgcgcatcatcgcggtcgacaatctgacgcgcgccgacaagttc
cggaacctcgtcgattgcgagatcgacgactatctcgacaagaccgaattcgtcgagcgc
ttcgcgcgcggcgatttcggcaaggtgcgcgcggtgttccacgaaggcgcgtgttccgac
acgatggaacacgacggccgctacatgatggacaacaacttccgctacagccgcgcggtg
ctcgacgcgtgcctcgcacagggcgcgcagttcctgtacgcgtcgtcggcggcgacctat
ggcggctcgacgcgcttcgtcgaggagcgcgaggtcgaggcgccgctcaacgtctacggc
tactcgaagttcctgttcgaccaggtggtccgccgcgtgctgccgagcgcgaagagccag
atcgccggcttccgctacttcaacgtgtacggcccgcgcgagacgcacaagggccgcatg
gcgtcggtcgcgttccacaacttcaaccagttccgcgcggaaggcaaggtcaagctgttc
ggcgaatacaacggctacgcgccgggcgagcagacgcgcgacttcgtgtcggtcgaggac
gtcgcgaaggtcaacctgttcttcttcgatcatccggagaagtcgggcatcttcaacctc
ggcacgggccgtgcacagccgttcaacgacgtcgcgacgtcggtggtcaacacgctgcgt
gcgctcgacaacctgccgccgctgacgcttgcgcagcaggtcgagcagggcctgatcgaa
tacgtgccgttcccggacgcgctgcgcggcaagtaccagtgctacacgcaggcggaccag
acgaagctgcgcgcggccggctacgatgcgccgttcctgacggtgcaggaaggcgtcgac
cgctacgtacgttggctgtccggccaggtttaa
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