Burkholderia sp. PAMC 26561: AXG89_41005
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Entry
AXG89_41005 CDS
T05481
Name
(GenBank) RNase II stability modulator
KO
K14051
c-di-GMP phosphodiesterase Gmr [EC:
3.1.4.52
]
Organism
bum
Burkholderia sp. PAMC 26561
Pathway
bum02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
bum00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
AXG89_41005
Enzymes [BR:
bum01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.4 Phosphoric-diester hydrolases
3.1.4.52 cyclic-guanylate-specific phosphodiesterase
AXG89_41005
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Paralog
Gene cluster
GFIT
Motif
Pfam:
EAL
GGDEF
PAS_9
PAS
PAS_4
Motif
Other DBs
NCBI-ProteinID:
AMH43977
UniProt:
A0A109ZZV6
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All DBs
Position
3:complement(1528365..1530380)
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AA seq
671 aa
AA seq
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MMGEEDGLDLFTWFGTTSPCWRLSSDSNALELATVRGPANVSIPLDASQAGQIRALTGVT
SHLALDLKIFGYPYRLHLVGKKINIREWAGTASDYTDTSSVARDLVHGLAFAEQVVSEVN
SLVVILDGRGLIQRFNRMCEEVTGMREEDVIGKSAYVLFMSDDEGAASRTNINGFFASGQ
PYQVERYINTVTGPRLFLFRNKFVQSGSGVDERFLICSGTDITEERKAQKLLLKQATTDE
LTGLLNRKAIQEEIENAIAAEREAGDSIGEEHLGILFLDLDNFKKVNDHYGHVVGDRLIR
EVSAKIKSCLAPGDTLARLGGDEFVVVVRKSTIPLLTKTAETILGSLHLPFDFGLIKLYT
GCSIGIALYPEHGDRLESLIRSADTAMYVAKDGGKHTYRVFTPEMNRKVAEYVWLDTNLR
RALEENQLELYYQPKVNLRSGDVDSVEALVRWNSPERGVVSPLDFIPYAEESGLIGPLGR
WVMQAAATQASNWQKQGLDLRISINVSARQLRDTDIVKHFTEVLAETRSRSCMLDVELTE
SCFIEDEAAALVLITQFRKMGVRVHLDDFGTGYSSLSQLSRIPLDAIKLDRSFIKGIDVN
SKPQALVRAMVAIAHELRLSVVAEGVESEAEADFLRGLGVDLVQGFLYARPMPARAFEAW
LAEKRKLRLIA
NT seq
2016 nt
NT seq
+upstream
nt +downstream
nt
atgatgggtgaagaagacggcctagacctgtttacgtggtttggcacgaccagcccgtgc
tggcggctgtcgagcgacagtaatgcgctcgagcttgcgaccgtgcggggacccgcgaac
gtcagcattccgctcgacgcgtctcaggcagggcagatccgggcgctgacgggggtgacg
tcgcatctggcgctcgacctgaagatattcggttatccctaccggctccacctggtcggt
aaaaagatcaacattcgcgaatgggccggaacggcatcggattacacggacacctcgtcg
gtcgcccgcgatctcgtgcatggtctcgcatttgccgaacaagttgtttccgaagtcaat
tcgctcgtcgtcattctcgacgggcgtggccttattcaacgcttcaatcgcatgtgcgaa
gaagtgaccggcatgcgtgaggaagacgtcattggcaaaagcgcctatgtgcttttcatg
tcggatgacgaaggcgcggcgtccaggaccaacatcaacggcttctttgcaagtggccag
ccgtaccaggtcgagcgttacatcaatacggtcacgggaccgcggctctttctgtttcgc
aacaagttcgtgcagagcggcagcggcgtggacgagcgcttcctgatctgctcgggcacc
gacattaccgaagagcgcaaggcccagaagctgctgctcaagcaggcgacgaccgacgag
ctgacggggctgctgaaccgcaaggccattcaggaagaaatcgagaacgcgatcgcggcc
gagagagaggcgggtgacagcattggcgaagagcatctcggcatcctgtttctagacctc
gacaacttcaagaaggtgaacgaccactacggacacgtggtcggcgaccggctgatccgc
gaggtatcggcgaagatcaagagttgtctcgctcccggtgacacgcttgcgcggctcggc
ggtgacgagttcgtcgtggtcgtcaggaagtcgaccatcccgctgctgaccaagaccgct
gaaaccatcctgggcagcctgcatctgccttttgacttcggactgatcaagctttacacc
ggttgctctatcggtatagcgctgtatcccgagcatggcgacaggctcgaaagcctgatt
cgcagcgcggacaccgccatgtacgtcgctaaagatggcggcaagcatacgtatcgcgtg
tttacgccggaaatgaaccgcaaggttgcggaatatgtgtggctcgacacgaacctgcgc
cgggcgcttgaagagaatcagctcgagctttattaccagccgaaggtgaatctcaggagc
ggcgacgtcgacagcgtcgaagcgctcgtgcgctggaattcgccggagcgcggcgttgtc
tcgccgctcgacttcatcccctatgcggaggagtccgggttgatcgggccgcttggacga
tgggtcatgcaagcggctgccacgcaggcgtcgaactggcagaagcagggcctcgacctg
cgcatatccatcaacgtgtcggcgcgccagttgcgcgatacggatatcgtcaagcatttc
accgaggtgcttgcagagacgcgctcgcgttcgtgcatgctcgacgtggaattgaccgaa
agctgtttcattgaagacgaagcggcggcgctcgtgctgatcacgcaattccgcaagatg
ggcgtgcgtgtgcatctcgatgactttggcacgggttattcgtcgttgtcgcagttgtcg
cgtattccgctcgacgccatcaagctggatcgaagcttcatcaagggaatcgatgtcaac
agcaaaccgcaagccctcgtgcgcgcgatggtcgcgattgcgcatgagctgcgtttgtcg
gtggtcgccgaaggcgtggaaagcgaagctgaagcggatttcctgcgcggcctgggcgtg
gatctcgtgcaaggcttcctttacgcgcggcccatgcctgcaagagccttcgaagcgtgg
ctcgcggagaaaagaaagctcaggctcatcgcctga
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