Burkholderia sp. HB1: AC233_07590
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Entry
AC233_07590 CDS
T04094
Symbol
rimO
Name
(GenBank) ribosomal protein S12 methylthiotransferase
KO
K14441
ribosomal protein S12 methylthiotransferase [EC:
2.8.4.4
]
Organism
buq
Burkholderia sp. HB1
Brite
KEGG Orthology (KO) [BR:
buq00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
buq03009
]
AC233_07590 (rimO)
Enzymes [BR:
buq01000
]
2. Transferases
2.8 Transferring sulfur-containing groups
2.8.4 Transferring alkylthio groups
2.8.4.4 [ribosomal protein uS12] (aspartate89-C3)-methylthiotransferase
AC233_07590 (rimO)
Ribosome biogenesis [BR:
buq03009
]
Prokaryotic type
ribosomal protein modification factors
AC233_07590 (rimO)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Radical_SAM
TRAM_2
UPF0004
TRAM
CLP1_P
Motif
Other DBs
NCBI-ProteinID:
ALE54595
LinkDB
All DBs
Position
1:1757119..1758510
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AA seq
463 aa
AA seq
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MSQTTSSASPTPSSPKVGFVSLGCPKALVDSEQIITQLRAEGYEISGTYDGADLVVVNTC
GFIDEAVQESLDAIGEALNENGKVIVTGCLGAKKSASGSGLIEEVHPKVLAVTGPHAVGE
VMQHVHMHLPKPHDPFVDLVPPAGVKLTPRHYAYLKISEGCNHRCTFCIIPSMRGDLVSR
PVAEVMLEAENLFKSGVKELLVISQDTSAYGVDVKYRTGFWNGKPIKTRMTDLVGALGEL
AAQYGAWVRLHYVYPYPSVDEVIPMMASGPYKGHVLPYLDVPFQHAHPEVLKRMKRPANA
EKVMERVKAWREMCPDLTIRSTFIAGFPGETEEQFQTLLDFIREAELDRVGCFAYSPVEG
ATANELDGALPDEVREERRARFMEVAEQVSAKRIAKKVGKTLKVLVDEINADGGIGRTAA
DAPEIDGVVYIAPAAKASKRYKVGDFVSVKITGADGHDLWGEV
NT seq
1392 nt
NT seq
+upstream
nt +downstream
nt
atgtcgcaaaccacttcttccgcctcgccgacgccttccagtccgaaggtagggttcgtt
agcctcggctgcccaaaagctttagtcgattccgagcagatcatcacgcagctgcgcgcc
gaaggctacgagatttcgggcacctatgacggcgcggacctcgtggtcgtcaatacctgc
ggtttcatcgacgaagcggtgcaggaaagcctcgacgcgatcggcgaggcgctgaacgaa
aacggcaaggtgatcgtgaccggctgcctcggcgcgaagaagagcgcgagcggctcgggc
ctcatcgaagaagtgcatccgaaagtgctggccgtgaccggcccgcatgcggtcggcgaa
gtgatgcagcacgttcacatgcatctgcccaagccgcacgatccgtttgtcgatctcgtg
ccgcccgcgggcgtcaagctcacgccgcgccattacgcgtacctcaaaatttccgaaggc
tgcaatcatcgctgcaccttctgcatcattccgtcgatgcgcggcgacctcgtgtcgcgt
ccggtcgccgaagtgatgctggaagccgagaatctgttcaagtccggcgtgaaggaactg
ctcgtcatttcgcaggacacgagcgcctacggcgtcgacgtcaaatatcgcaccgggttc
tggaacggcaagccgatcaagacgcgcatgaccgatctcgtcggcgcgctcggcgaactg
gccgcgcaatacggcgcgtgggtgcgtctgcattacgtgtatccgtacccgagcgtcgac
gaagtcattccgatgatggcgtcgggcccgtacaagggccacgtgctgccgtatctcgac
gtgccgttccagcacgcgcatcccgaagtgctcaagcgcatgaagcgcccggccaacgcc
gagaaggtgatggagcgcgtgaaggcgtggcgcgagatgtgtccggacctcacgatccgc
agcacgtttatcgcgggctttcccggcgaaaccgaggagcagttccagacgctgctcgac
ttcatccgcgaagccgaactggatcgcgtgggctgcttcgcgtattcgccggtcgaaggc
gcaacggcgaacgagctcgacggcgcgttgccggacgaagttcgcgaagagcgtcgcgcg
cgcttcatggaagtggccgaacaagtgtcggccaaacggatcgcgaagaaggtcggcaag
acgctgaaagtgctcgtcgacgaaatcaacgccgacggcggcattggccgcacggccgcg
gatgcgccggagatcgacggcgtcgtgtatatcgcgccggccgcgaaggcgtcgaagcgt
tacaaggtcggcgacttcgtgtcggtgaaaatcaccggcgcggacggtcacgacctgtgg
ggcgaggtctga
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