Burkholderia sp. HB1: AC233_25200
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Entry
AC233_25200 CDS
T04094
Name
(GenBank) DNA polymerase I
KO
K02335
DNA polymerase I [EC:
2.7.7.7
]
Organism
buq
Burkholderia sp. HB1
Pathway
buq03030
DNA replication
buq03410
Base excision repair
buq03420
Nucleotide excision repair
buq03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
buq00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
AC233_25200
03410 Base excision repair
AC233_25200
03420 Nucleotide excision repair
AC233_25200
03440 Homologous recombination
AC233_25200
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
buq03032
]
AC233_25200
03400 DNA repair and recombination proteins [BR:
buq03400
]
AC233_25200
Enzymes [BR:
buq01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
AC233_25200
DNA replication proteins [BR:
buq03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
AC233_25200
DNA repair and recombination proteins [BR:
buq03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA polymerase I
AC233_25200
NER (nucleotide excision repair)
GGR (global genome repair) factors
AC233_25200
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A
5_3_exonuc_N
DNA_pol_A_exo1
5_3_exonuc
GPAT_N
Motif
Other DBs
NCBI-ProteinID:
ALE57785
LinkDB
All DBs
Position
2:complement(1148304..1151045)
Genome browser
AA seq
913 aa
AA seq
DB search
MPEERSLEGKTLLLVDGSSYLYRAYHAMPDLRGPDGGPTGALYGMINMLRRMRKEVTAEY
SACVFDAKGKTFRDDWYPDYKANRPSMPDDLSRQIEPIHVAVRALGWPLLMIDGVEADDV
IGTLSTEAEKRGMNVIVSTGDKDLAQLVSDHVTLINTMTNEKLDRAGVLAKFGVPPERIV
DYLSLIGDTVDNVPGVEKCGPKTALKWLTQYESLDGIVAHADEIKGAVGDNLRRALDFLP
MARKLVTVERNCDLTEHIASIGENLQSRPESREELRDVFTRHGFKTWLREVEIVDAVEGP
ETDVPPALTVDHERHYETVQTWEQFDAWLQKINTAEITSFDTETTSLDPMVAQIVGLSFS
VEAGHAAYVPVAHRGPDAPVQLPRHEVLAKLKPWLESAEHKKVGQHLKYDEQVLANYGIE
MRGVEHDTLLQSYVLESHRPHDMDNLALRHLGIKTIKYEDVAGKGAQQIGFDEVALDKAA
EYAAEDADITLRLHQTLYPQLAAEETLEHVYRDIEVPTSRVLRKMERSGVLIDAEKLRQQ
SSEIATRLIQLESEAYVLAGGEFNLGSPKQIGQIFFERLELPVVKKTPSGAPSTDEEVLQ
KLAEDYPLPKILLEHRGLSKLKSTYTDKLPRMVNANTGRVHTNYAQAVAVTGRLASNDPN
LQNIPVRTGEGRRIREAFIAPPGHKLVSADYSQIELRIMAHISGDESLLRAFSEGEDIHR
ATAAEIFSVTPLEVSNDQRRVAKVINFGLIYGMSSFGLASNLGITRDAAKLYIDRYFARY
PGVARYMDETRLSAKAKGYVETVFGRRLWLPEINGGNGPRRQAAERAAINAPMQGTAADL
IKLSMIAVQKWIEESNIGTRMIMQVHDELILEVPDEELSDVRKRLPELMCGVAALKVPLV
AEVGAGLNWEEAH
NT seq
2742 nt
NT seq
+upstream
nt +downstream
nt
atgcctgaagaacgaagccttgaaggtaagaccctgctattggtcgacggttcgagttat
ctgtaccgggcctaccatgcgatgcctgatctgcgcgggcccgacggtggtcccacgggt
gcgctctatgggatgatcaacatgctgcggcgcatgcgcaaggaagtcacagcagagtat
agcgcgtgcgtgttcgacgccaagggcaaaacgtttcgcgacgactggtatcccgactat
aaggcgaatcgtccttccatgcccgacgatctgtcgcggcaaatcgagccgattcacgtg
gccgtgcgcgctctcggctggccgcttctgatgatcgacggcgtggaagccgacgacgtg
atcggcacgctttccaccgaggcggaaaagcgcggcatgaacgtgatcgtgtcgactggt
gacaaggatctggcgcagctcgtgtcggatcatgtcaccctcatcaatacgatgaccaac
gaaaagctcgaccgtgccggcgtgctcgccaaattcggcgtgccgccggagcgcattgtc
gactacctgtcgttgatcggcgataccgtcgacaacgtgccgggcgtcgagaaatgcgga
ccgaaaaccgcgctcaaatggctgacgcaatatgagtcgctggatggcatcgtcgcacat
gcggacgagatcaaaggtgcggtaggagacaatctgcgacgcgcgctcgactttctgccg
atggcgcgcaagctcgtcaccgtcgaacgcaattgcgatctgaccgaacatatcgcgtcg
atcggggaaaatttgcagagccgccctgaatcgcgggaggaattgcgcgacgtgttcacg
cgccacgggttcaagacctggctgcgcgaggtggaaattgtcgacgcggtggaaggtccg
gaaaccgacgtgccgccggcgctcaccgtcgatcacgaacggcactacgaaaccgtgcag
acgtgggagcaattcgacgcgtggctgcaaaagatcaacacagcggagatcacttcgttc
gataccgaaaccacgtcgctcgatccgatggtcgcgcaaatcgtgggcctgtcgttctcg
gttgaggcaggtcatgccgcttatgtgccggtcgcgcatcgcggcccggacgcgcccgtg
caactgccgcgccatgaagtgctcgcgaagctcaagccgtggctcgaaagcgcggagcat
aaaaaagtcggtcagcatctgaagtacgacgaacaggtgctcgccaattacggcattgaa
atgcgcggcgtcgaacacgacacgctgctgcaatcgtacgtgctggaatcgcatcgtccg
catgacatggacaacctcgcgctgcgccatctcggcatcaagacgatcaagtatgaagac
gtcgcgggcaagggcgcgcagcaaatcggtttcgacgaagtcgcgctcgacaaggccgcc
gaatacgcagccgaagacgccgacatcacgttgcgtctgcatcaaacgctgtatccgcag
ctcgcagcggaagagacgctcgagcatgtgtatcgcgacatcgaagtgcccacgtcgcgc
gtattgcgcaagatggagcgcagcggcgttttgatcgacgcggaaaagttgcgtcagcaa
agcagcgaaattgcaacgcggcttatccagttggagagcgaggcgtatgtgctcgccggc
ggcgaattcaaccttggttcgccgaagcagattggccagatcttcttcgaacgactcgag
ttgccggtcgtgaagaaaacgccgagcggcgcgccttcgacggacgaagaagtgctgcaa
aagctcgccgaagattatccgttgccgaaaattttgctcgaacatcgcggcttgtcgaag
ctgaagtccacgtacaccgacaagctgccgcgcatggtcaacgcaaacacgggccgcgtg
cacacgaactatgcgcaggccgtcgcggtcacggggcgtcttgcgtcgaacgatccgaac
ctgcagaacattcctgtgcgcaccggcgaaggccgccgcattcgcgaagccttcattgcg
ccgccgggacacaagctcgtttccgcggattactcgcaaatcgaactgcgcatcatggcg
cacatttcgggcgacgaatcgttgctacgcgccttctcggaaggtgaagacattcaccgc
gcgaccgccgcggaaattttcagcgtgacgccgctcgaagtgtcgaacgatcagcggcgc
gtggcgaaggtcatcaacttcggactgatctacggcatgagttcgttcggactcgcgtcg
aatctcggcattacgcgcgatgccgccaagctttatatcgaccgctatttcgcacgttat
ccgggcgtcgcgcgttatatggacgagacgcgcttaagcgcgaaagccaagggttatgtc
gagaccgttttcggccgacggctgtggctgccggaaatcaacggcggcaacggtccacgt
cgtcaggccgccgagcgcgcggctattaacgcgccgatgcaaggcacggccgccgacctc
atcaagctctcgatgatcgccgtgcagaagtggatcgaagaatcgaacatcggcacgcgc
atgatcatgcaggtgcacgacgaactgatcctcgaagtacccgacgaagaactgtccgac
gtgcgcaagcgtctgccggagttgatgtgcggcgtcgccgcgctgaaagtgccgctggtc
gcggaggtcggcgcggggctcaactgggaggaagcgcattga
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