Paraburkholderia phytofirmans OLGA172: AYM40_11315
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Entry
AYM40_11315 CDS
T05111
Symbol
rimO
Name
(GenBank) ribosomal protein S12 methylthiotransferase RimO
KO
K14441
ribosomal protein S12 methylthiotransferase [EC:
2.8.4.4
]
Organism
buz
Paraburkholderia phytofirmans OLGA172
Brite
KEGG Orthology (KO) [BR:
buz00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
buz03009
]
AYM40_11315 (rimO)
Enzymes [BR:
buz01000
]
2. Transferases
2.8 Transferring sulfur-containing groups
2.8.4 Transferring alkylthio groups
2.8.4.4 [ribosomal protein uS12] (aspartate89-C3)-methylthiotransferase
AYM40_11315 (rimO)
Ribosome biogenesis [BR:
buz03009
]
Prokaryotic type
ribosomal protein modification factors
AYM40_11315 (rimO)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Radical_SAM
TRAM_2
UPF0004
TRAM
CLP1_P
Motif
Other DBs
NCBI-ProteinID:
ANB72891
UniProt:
A0A160FKI6
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All DBs
Position
1:complement(2610695..2612086)
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AA seq
463 aa
AA seq
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MSQTISSAVPTPSTPKVGFVSLGCPKALVDSEQIITQLRAEGYEISGTYDGADLVVVNTC
GFIDEAVQESLDAIGEALSENGKVIVTGCLGAKQSASGSNLIEEVHPKVLAVTGPHALGE
VMQAVHNHLPKPHDPFIDLVPAAGVKLTPRHYAYLKISEGCNHRCTFCIIPSMRGDLVSR
PVAEVMLEAENLFKSGVKELLVISQDTSAYGVDVKYRTGFWNGKPIKTRMTDLVGALGEL
AAQYGAWVRLHYVYPYPSVDEVIPMMAEGPFKGHVLPYLDVPFQHAHPEVLKRMKRPANA
EKVMERVKAWREICPDLTIRSTFIAGFPGETEEQFQTLLDFIREAELDRVGCFAYSPVEG
ASANELDGALPDEVREERRARFMEVAEEVSAKRIAKKVGKTLKVLVDEINADGGIGRTAA
DAPEIDGVVYIAPATKASKRYKVGDFVSVKITGADGHDLWGEV
NT seq
1392 nt
NT seq
+upstream
nt +downstream
nt
atgtcgcagaccatttcctccgccgtgccgaccccttcgactccgaaggtcggattcgtc
agcctcggctgccctaaagcgctagtcgattccgaacagatcattacgcagctgcgcgcc
gagggatacgagatctccggcacgtacgacggcgcggacctcgtcgtcgtcaacacttgc
gggttcatcgacgaagcggtgcaggaaagcctcgacgcgatcggtgaagcgctcagcgaa
aacggcaaggtgatcgtcacgggctgcctgggtgccaagcagagtgcgagcggctcgaac
ctgatcgaagaagtgcatccgaaggtgctggccgtgactggcccgcatgcgctcggcgaa
gtgatgcaggcggtccacaatcatctgccgaagccgcacgatccgttcatcgatctggtg
ccggctgccggcgtgaagctcacgccgcgccactatgcgtacctgaaaatttccgaaggc
tgcaaccaccgctgcacgttctgcatcatcccgtcgatgcgcggcgacctcgtgtcgcgc
ccggtcgccgaagtgatgctcgaagcggagaacctgttcaagtccggcgtgaaagaactg
ctggtgatttcgcaggacacgagcgcctatggcgtcgacgtcaaataccgcaccggtttc
tggaacggcaagccgatcaagacgcgcatgaccgatctggtcggcgcgctcggcgaactc
gcggcgcaatacggcgcatgggtgcgcttgcattacgtgtatccgtatccgagcgtcgat
gaagtcattccgatgatggccgaaggtccgttcaagggccacgtgctgccgtatctggat
gtgccgttccagcacgcgcatccagaagtgctgaagcgcatgaagcgtccggccaacgcc
gagaaagtgatggagcgcgtgaaggcgtggcgcgaaatatgtcccgatctgacgatccgc
agcacgttcatcgccggcttcccgggcgagactgaagagcaattccagacgctgctcgat
ttcatccgcgaggcggaactggatcgggtcggctgctttgcttactcgccagtcgaaggc
gcgagcgccaacgaactcgacggcgcattgcccgacgaagtgcgcgaagaacgccgcgcg
cgtttcatggaagtggccgaagaagtgtcggccaaacggatcgcgaagaaggtcggcaag
acgctgaaagtgctggtcgacgagatcaatgccgacggcggcatcggccgcacggcggcg
gatgcgcccgagatcgacggcgtcgtgtatatcgcaccggccaccaaggcgtccaagcgt
tacaaggtcggcgatttcgtctcggtgaagatcaccggcgccgacggccacgacctgtgg
ggcgaggtctaa
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