Paraburkholderia phytofirmans OLGA172: AYM40_14385
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Entry
AYM40_14385 CDS
T05111
Name
(GenBank) RNA degradosome polyphosphate kinase
KO
K00937
polyphosphate kinase [EC:
2.7.4.1
]
Organism
buz
Paraburkholderia phytofirmans OLGA172
Pathway
buz00190
Oxidative phosphorylation
buz03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
buz00001
]
09100 Metabolism
09102 Energy metabolism
00190 Oxidative phosphorylation
AYM40_14385
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
AYM40_14385
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
buz03019
]
AYM40_14385
Enzymes [BR:
buz01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.4 Phosphotransferases with a phosphate group as acceptor
2.7.4.1 ATP-polyphosphate phosphotransferase
AYM40_14385
Messenger RNA biogenesis [BR:
buz03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Others
AYM40_14385
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PP_kinase_C_1
PP_kinase_C
PP_kinase
PP_kinase_N
PLDc_2
Motif
Other DBs
NCBI-ProteinID:
ANB73417
UniProt:
A0A167W1N4
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All DBs
Position
1:3295518..3297581
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AA seq
687 aa
AA seq
DB search
MSIRYPLLNRELGILGFNERVLAQAADPAVPLLERLRFICITSSNLDEFFEVRMAGLQEQ
MRDNPGAPSPDGMSLQHVYDLVVERAQRLVHRQYTMLHDTVLTALEAEGIYFHGTEAWNE
AQTQWARNYFFDELLPVLTPIGLDPAHPFPRVLNKSLNFVVELEGKDAFGRQAMMGIVQA
PRALPRLVRMPQELSGYPHGFVLLSSLLQRFVGELFPNLVVRTCNQFRITRNSELFVDED
EITNLRVALQGELPARHLGNAVRLEVSADTPAHVVRRLLDESSLSTKDCYFVDGPVNLVR
LMQLPEMVDRPDLKFVPHIPAIPPQIANSANMFDVIDQGDVLLHHPYESFQPVLELLLQA
AKDPNVVAIKQTIYRTGTDSPLMDALMQAARNGKEVTVVVELLARFDEETNINWASQLEA
VGAHVVYGVVGHKCHAKMMLIVRRVSSGGKTTLKRYVHLGTGNYHPRTARLYTDFGLMTA
DQKICEDVHHVFQQLTGIGGELKLHEFWQSPFTLHPKLVEAIRAEAAHARAGKKARIVAK
MNALLEPTVIAELYEASQAGVKIDLIVRGVCSLQPGVPGLSENITVRSIVGRFLEHHRIF
YFHDDGKELVYLSSADWMDRNFFRRVEVAFPVNNRRLKRRVIAEGLSAFLGDNQSAWLMQ
SDGHYRRRRPGKSSRNAQMSLLGKFCS
NT seq
2064 nt
NT seq
+upstream
nt +downstream
nt
atgtccatccgctaccccttattgaatcgcgagctgggcattctgggtttcaacgagcgt
gtgttggcacaagctgccgacccagccgtccctttgctcgaacgcctgcgcttcatctgc
atcaccagtagcaacctcgacgaattcttcgaagtccgcatggccggcctgcaggaacag
atgcgcgacaaccccggcgcgccgtcgccggacggtatgtcgttgcagcacgtgtacgac
ctcgtggtcgaacgcgcgcagaggctcgtgcatcgccagtacaccatgctgcacgacacg
gtgctcaccgcgctcgaagcagaaggcatctattttcacggcactgaagcgtggaacgaa
gcgcagacccaatgggcgcgcaattacttcttcgacgaactgctgccggtgctcacgcca
atcggcctcgatccggcgcacccgtttccgcgcgtgctcaataagagcctgaacttcgtc
gtcgaactggaaggcaaggatgcgttcggccgccaggcgatgatgggcatcgtgcaggcg
ccgcgtgcattgccgcggctcgtgcgcatgccacaggaactgtcgggttatccgcatggt
ttcgtgctgctgagctcgttgctgcagcgctttgtcggcgagctgtttccgaatctggtg
gtgcgcacctgcaaccagtttcgcatcacgcgcaatagcgaactgttcgtcgacgaagac
gaaatcaccaatctgcgtgtcgccttgcagggcgaactgccggcgcggcatctgggcaat
gcggtgcggctcgaagtgtcggcggacacgcccgcgcatgtcgtgcggcgcctgctcgac
gaaagcagcctgagcaccaaggattgctatttcgtcgacggtcccgtcaatctggttcgg
ctgatgcaattgccggagatggtggaccggcccgacctgaagttcgtgccgcatattcct
gcgattccgccgcagatcgccaacagcgcgaacatgttcgacgtgatcgatcagggcgac
gtgctgctgcatcatccttacgagagctttcagccggtgctcgaactgctgctgcaggca
gctaaagacccgaatgtggtggccatcaagcagaccatctatcgcaccggcaccgactcc
ccgctgatggacgcgctgatgcaggcggcgcgcaacggcaaggaagtgacagtggtggtt
gaactgctcgcgcgcttcgacgaagaaaccaatatcaactgggcgtcgcagttggaagcg
gtgggcgcgcatgtcgtgtacggcgtggtgggccacaagtgccacgcgaagatgatgctg
atcgtgcggcgtgtgtcgtcgggcggcaagaccacgctcaagcgctatgtgcacctgggc
accggcaactatcatccgcgcacggcgcgtctttataccgacttcggcctgatgaccgcc
gatcaaaagatctgcgaagacgtgcaccacgtgttccagcaactgaccggcatcggcggt
gagctaaagctgcatgagttttggcagtcgccgttcacgctgcacccgaaactggtcgag
gcgattcgcgcggaagccgctcacgcgcgcgccggcaagaaggcccgcattgtcgcgaag
atgaacgcgctgctcgaacccaccgtgattgccgagctgtacgaagcatcgcaggccggc
gtgaagatcgatctgatcgtgcgtggcgtctgttcgttgcaaccgggtgtgccgggtttg
tcggagaacatcacggtgcgttcgatcgttgggcgctttctcgagcatcatcgcatcttc
tatttccacgacgacggcaaggaactggtgtatctgtcgagcgccgactggatggaccgt
aacttcttccggcgtgtggaagtggcgtttccggtcaacaaccgccgcttgaagcggcgt
gtgattgccgaaggcctgtcagcgtttctcggcgacaaccagtccgcctggttgatgcaa
agcgacggtcactatcggcgccggcggccggggaaatcctcgcgcaatgcgcagatgagt
ctgctggggaaattctgttcgtaa
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