Bombus vancouverensis nearcticus: 117162713
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Entry
117162713 CDS
T07628
Name
(RefSeq) transient receptor potential channel pyrexia-like isoform X1
KO
K04984
transient receptor potential cation channel subfamily A member 1
Organism
bvan
Bombus vancouverensis nearcticus
Brite
KEGG Orthology (KO) [BR:
bvan00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
bvan04040
]
117162713
Ion channels [BR:
bvan04040
]
Voltage-gated cation channels
Transient receptor potential channel (TRP)
117162713
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ank_2
Ank
Ank_4
Ank_5
Ank_3
Ion_trans
Motif
Other DBs
NCBI-GeneID:
117162713
NCBI-ProteinID:
XP_033200471
LinkDB
All DBs
Position
Unknown
AA seq
792 aa
AA seq
DB search
MNSYDDDQLKLITSIENDDIGTAIEICTTRFDKKFLQPVGVLRVTIVQLAAWQGNIELLQ
LLYENGADINATDKIGRCALFHAAHHGNCEVVNWLLEHGASTENRVGVDSCYKNTRSPSN
LCFIGQNLPTPECWGRTPMHQAVKNNHSAVVKILVEAGADVNAEDERGITPLLLAGTAIV
KEDFNEISKFNDIVEILVAAKASTNVIDPNTGTTVLHTATSLGSCSATKRLLNGGAWPLY
QCKGTGSTPLHLAASTGNPEALSILLESIPSCDIDIRDNINRTPLHRAAYQGHHECVRIL
IDHGGNLGAETNTGITVIDAIFAHIPTPVLFLNDILSSRVKMSSVESSVENSQITIDFNV
LAPKGELQMGVVTSLIAAASNVEQLTILQHPLVETFLWLKWSKLRVFFFSLVFVHALLVF
SLSGYSITILQYETDCGLLRRILSSCSCVLFLHNVVQVLMVPRYYLRQYETWLSFTCAAI
SLTISMGNAYRSEITASSGEKELHDARQPLQWMLHSISLAILLAWMQMMLLIGRLPMCGY
YALMFSTVLKNILKVLLAFVCLIVGFAFSFAVLFHGNDQFRNSWRAVVKTVVMMMGEYEY
GALFSDEKNGSSFLPATSRVVFLAFVMLASIVLMNLMIGLAVNDIQGLEKEGHIRQLLKQ
AEFVAHLERLVLTSHRIFRRNWLHPRLARLLDSRRGIPTKITFCYHERYFHESSLGVPAR
LREALFLLALGNSRDTESRRENNNGDDNVELKALLEEVLLQLRVPYYPSAMRKFSVPYNA
RTQTGQRKIANQ
NT seq
2379 nt
NT seq
+upstream
nt +downstream
nt
atgaattcgtacgatgacgatcaattaaaattgatcacctctatcgaaaacgacgatata
ggaacggcaatagagatctgcaccacgagattcgataaaaaattcttacagcctgttgga
gtactgcgcgtgactatcgttcagttggctgcttggcaagggaatattgaattattgcaa
ctgttgtatgaaaatggagctgatatcaatgccacggacaaaattggcagatgtgcgctt
tttcacgcggcgcatcatggaaactgcgaagtggtgaattggttgttggaacatggagct
tccacggaaaatagagtcggggttgattcttgttacaagaatactcgttcaccttcgaac
ctgtgttttattggtcaaaacttacctacaccagagtgttggggaaggacacccatgcac
caagctgtgaagaacaatcactctgcggtagtcaagatcctggtggaagctggtgctgat
gtgaacgcggaagacgaacgtggaatcacaccattgcttctagcagggaccgcaatcgta
aaagaagatttcaacgaaatttccaaatttaatgacatcgtcgagatcctcgtagcagcg
aaagcttcgaccaacgtcatcgatcctaatacaggtactaccgtattgcatactgcgacc
tcactaggaagttgttcggcgacgaaaaggttactgaacggtggtgcgtggcctctttat
caatgcaaaggcacaggaagtactcctcttcatctcgctgccagcacgggtaacccagag
gcgctttcgatccttctagagagcataccttcttgtgatatcgacattcgagataacatc
aatcgaacaccattgcatagagcagcttaccaaggtcaccacgagtgcgttcgaatacta
atcgatcacggtggcaatttaggcgcagaaacgaacacgggaattactgtcatcgatgcc
atatttgctcacataccaacaccagtcttatttctaaacgatattctgtcttcccgcgtt
aaaatgagttccgttgaaagttccgtggaaaattcccagatcaccattgacttcaacgtg
ctagcgccaaaaggagagctgcaaatgggagtagttacgtcccttattgcagcagcctcg
aacgtggaacaattgacgatactacaacatccgctggtggaaacgttcctctggttgaag
tggtccaagttgagagtattcttctttagtctcgtcttcgtccacgccctgctggtcttt
tccctgtctggttattccataacgatattgcaatacgagactgattgcggcctgttgcgg
aggattctctcttcctgttcttgtgtcctcttcctccacaatgtcgtgcaagtgctgatg
gtacctagatattatctgagacagtacgaaacgtggctatcgttcacctgcgcggcgata
tctctgacgatttcaatgggtaacgcttatagaagcgagattacagcttcatcaggggaa
aaggaattacacgatgctcgacagccccttcaatggatgttgcattccatcagcctggca
atcctgcttgcctggatgcaaatgatgctgttaatcggccgccttccaatgtgcggatat
tacgcgctcatgttctccacggtgctgaagaatattctgaaggttctcctagcgttcgtc
tgcctgattgtcggattcgcgttcagcttcgccgttttgttccacgggaacgaccagttt
cgcaattcctggagggccgtcgtgaagaccgtggtaatgatgatgggtgagtacgagtac
ggggctctgttctcggacgagaagaatgggagttccttcctaccagccacgagcagggtc
gtgttcctcgctttcgtcatgctcgctagtatcgtcctgatgaacctgatgatcggcctc
gcggtcaatgacatccaaggcctcgagaaagagggacacattcgccaattgctgaagcag
gccgagtttgtggctcatttagaaagactagtgctgacatcacatcgaatctttcgccgc
aattggctacatcctcggttagccaggctgctagactcgaggcgaggcattcccacaaaa
attacgttctgttatcacgaacgttatttccatgaatcatccctcggcgtgccagcgagg
ctgagggaggcgttgtttctgctcgccttgggaaactcgcgcgacaccgaaagcaggcgt
gaaaataacaacggggacgataacgtggaattaaaagcgctgttggaggaagtgttgttg
caattaagggtaccttattatccgtccgccatgagaaagttttcagtaccttataatgca
cgaactcaaacgggacagaggaagattgctaaccagtga
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