Burkholderia vietnamiensis LMG 10929: AK36_2131
Help
Entry
AK36_2131 CDS
T03893
Symbol
rimO
Name
(GenBank) ribosomal protein S12 methylthiotransferase RimO
KO
K14441
ribosomal protein S12 methylthiotransferase [EC:
2.8.4.4
]
Organism
bve
Burkholderia vietnamiensis LMG 10929
Brite
KEGG Orthology (KO) [BR:
bve00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
bve03009
]
AK36_2131 (rimO)
Enzymes [BR:
bve01000
]
2. Transferases
2.8 Transferring sulfur-containing groups
2.8.4 Transferring alkylthio groups
2.8.4.4 [ribosomal protein uS12] (aspartate89-C3)-methylthiotransferase
AK36_2131 (rimO)
Ribosome biogenesis [BR:
bve03009
]
Prokaryotic type
ribosomal protein modification factors
AK36_2131 (rimO)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Radical_SAM
TRAM_2
UPF0004
TRAM
CLP1_P
Motif
Other DBs
NCBI-ProteinID:
AJY07589
LinkDB
All DBs
Position
I:2305777..2307138
Genome browser
AA seq
453 aa
AA seq
DB search
MSQSPKVGFVSLGCPKALVDSEQIITQLRAEGYEISGTYDGADLVVVNTCGFIDEAVQES
LDAIGEALTENGKVIVTGCLGAKSSASGSNLIEEVHPKVLAVTGPHAVGEVMQAVHSHLP
KPHDPFVDLVPAAGIKLTPRHYAYLKISEGCNHRCTFCIIPSMRGDLVSRPVAEVMLEAE
NLFKSGVKELLVISQDTSAYGVDVKYRTGFWNGKPIKTRMTDLVAALGELAAQYGAWVRL
HYVYPYPSVDEVIPLMAEGPFKGHVLPYLDVPFQHAHPDVLKRMKRPANAEKVLERVQKW
REICPDLTIRSTFIAGFPGETEAQFETLLDFIREAELDRVGCFAYSPVEGATANELDGAL
PDDVREERRARFMEVAEEVSARRMQRKVGKTLKVLIDEVGNEGGIGRTAADAPEIDGVVY
VEPAAKASKRYKVGDFVSVKITGADGHDLWGEV
NT seq
1362 nt
NT seq
+upstream
nt +downstream
nt
atgtcccagtcccccaaagtaggcttcgtgtcgctcggttgtccgaaagccctcgtcgac
tccgagcaaatcatcacgcagctgcgcgccgaaggttatgaaatctccggcacctacgac
ggcgccgatctcgtcgtcgtcaacacctgcggtttcatcgacgaagccgtgcaggaaagc
ctcgacgcgatcggcgaggcgctgaccgagaacggcaaggtgatcgtcaccggctgcctc
ggcgcgaagtcgagcgcgagcggctccaacctgatcgaggaagtccatccgaaggtgctc
gccgtcaccggcccgcacgcggtcggcgaagtgatgcaggccgtgcattcgcatctgccg
aagccgcacgacccgttcgtcgatctcgtgccggccgccggcatcaagctcacgccgcgc
cactacgcgtatctgaagatctcggaaggctgcaaccaccgctgcacgttctgcatcatc
ccgtcgatgcgcggcgatctcgtgtcgcgtccggtcgccgaagtgatgctcgaagccgag
aacctgttcaagtccggcgtgaaggagctgctcgtgatctcgcaggacacgagcgcatac
ggcgtcgacgtgaagtaccgcacgggcttctggaacggcaagccgatcaagacccgcatg
accgacctcgtcgccgcgctcggcgaactcgccgcccagtacggcgcgtgggtgcgcctg
cactacgtgtatccgtatccgagcgtcgacgaagtgattccgctgatggccgaaggcccg
ttcaagggccacgtgctgccgtatctcgacgtgccgttccagcatgcgcatccggacgtg
ctcaagcgcatgaagcgcccggccaacgccgagaaggtgctcgagcgcgtgcagaagtgg
cgcgagatctgtccggacctgacgatccgcagcacgttcatcgccggcttccccggcgag
acggaagcgcagttcgaaacgctgctcgacttcatccgtgaagcggagcttgaccgcgtc
ggctgcttcgcgtattcgccggtcgaaggcgcgaccgccaacgaactcgacggcgcgctg
ccggacgacgtgcgcgaggagcgccgcgcgcgcttcatggaagtggccgaggaagtgtcg
gcgcggcgcatgcagcgcaaggtcggcaagacgctgaaggtgctgatcgacgaagtcggc
aacgagggcggcatcggccgcacggcggcggatgcgccggagatcgacggcgtcgtctac
gtcgagccggcggcgaaggcatcgaagcgctacaaggtcggcgatttcgtgtcggtgaag
atcaccggcgcggacggccacgacctgtggggcgaggtctag
DBGET
integrated database retrieval system
