Bradyrhizobium xenonodulans: I3J27_37160
Help
Entry
I3J27_37160 CDS
T09324
Symbol
polA
Name
(GenBank) DNA polymerase I
KO
K02335
DNA polymerase I [EC:
2.7.7.7
]
Organism
bxn
Bradyrhizobium xenonodulans
Pathway
bxn03030
DNA replication
bxn03410
Base excision repair
bxn03420
Nucleotide excision repair
bxn03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
bxn00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
I3J27_37160 (polA)
03410 Base excision repair
I3J27_37160 (polA)
03420 Nucleotide excision repair
I3J27_37160 (polA)
03440 Homologous recombination
I3J27_37160 (polA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
bxn03032
]
I3J27_37160 (polA)
03400 DNA repair and recombination proteins [BR:
bxn03400
]
I3J27_37160 (polA)
Enzymes [BR:
bxn01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
I3J27_37160 (polA)
DNA replication proteins [BR:
bxn03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
I3J27_37160 (polA)
DNA repair and recombination proteins [BR:
bxn03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA polymerase I
I3J27_37160 (polA)
NER (nucleotide excision repair)
GGR (global genome repair) factors
I3J27_37160 (polA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A
5_3_exonuc_N
5_3_exonuc
DNA_pol_A_exo1
HHH_5
Transposase_20
Motif
Other DBs
NCBI-ProteinID:
WBL78504
LinkDB
All DBs
Position
7875416..7878457
Genome browser
AA seq
1013 aa
AA seq
DB search
MPKTAPKTSTKADTKPAAATAAAKPVAAKAVGKGDHIFLVDGSGYIFRAYHALPPLNRKS
DGLQVNAVLGFCNMLWKLLRDMPEDNRPTHLAIVFDKSEVTFRNTIYPEYKAHRPPAPDD
LIPQFALIREAVRAFDLPCLEQGGFEADDLIATYVREACERGASATIVSSDKDLMQLVTD
CVTMYDTMKDRRIGIPEVIEKFGVPPEKVVEVQALAGDSTDNVPGVPGIGIKTAAQLIVE
YGDLEQLLFRAGEIKQPKRREALLENAEKARISRKLVLLDDKVKLDVPLDDLAVHEPDAR
KLIAFLKAMEFTTLTRRVADYSQIDPANVDADASNSSGARAGDGAARARSSDASGDLFAA
PAATATGGDKGDKGASLKGAPISLAAAREEALRKLPVERGKYQAIKSLKELNAFIARIHD
TGHVAIEIRANSIDPMQADLCGIALALAPNEACYVPLAHKQSGGGAGLFDAGLAPDQVKH
DDAIEALRPVLESPGILKIGFDVKFTAVMLAQHGITLRNSDDAQLISYVLDAGRGSHGLE
SLSERWFSHAMLKEGELLGSGKGKITFDQVPIDKAAPLSAEGADMTLRVWRVLKPRLVAE
HMTTVYETLERPLVSVLARMERRGISIDRQVLSRLSGDFAQTAARVEAEIQEIAGEPVNV
GSPKQIGDILFGKMGLPGGTKTKTGAWSTTAQVLDELAEQGHDFPRKILEWRQVSKLKST
YTDALPTYVNPQTHRVHTTYALAATTTGRLSSNEPNLQNIPVRTEDGRKIRRAFIAISGH
KLVSADYSQIELRLLAEIADIPVLKQAFRDGLDIHAMTASEMFGVPIKGMPSEIRRRAKA
INFGIIYGISAFGLANQLGIAREEASAYIKKYFERFPGIRAYMDETRDFCRQNGYVTTLF
GRKMYYPDIKASNASVRAFNERAAINARLQGTAADIIRRAMTRVEGALAEKKLSAQMLLQ
VHDELIFEVPDAEVEATLPVVQHVMQDAPFPAVLLSVPLHVDARAANNWDEAH
NT seq
3042 nt
NT seq
+upstream
nt +downstream
nt
atgcccaaaactgccccgaagacctccaccaaagctgacaccaagcccgctgctgcgaca
gctgctgccaaacccgtcgccgcgaaggcggtcggcaagggcgaccacatcttcctggtc
gacggttccggctacatcttccgcgcctatcacgcgttgccgccgctgaaccgcaagtcc
gacggacttcaggttaatgccgtgctcggcttctgcaacatgctgtggaagctgctccgc
gacatgcccgaggacaaccggccgacgcatctggccatcgtgttcgacaagtcggaagtc
accttccgcaacacgatctatcccgaatacaaggcgcaccggccgccggcgcccgatgat
ctcattccgcaattcgcactgatccgcgaggccgtgcgcgccttcgacctgccatgcctg
gaacagggcggcttcgaggccgacgatctgatcgcgacctatgtccgtgaagcctgcgag
cgcggcgcgagcgcgaccatcgtgtcatccgacaaggacctgatgcagctcgtcaccgat
tgcgtcaccatgtacgacaccatgaaggaccgccgcattggcatccccgaagtgatcgag
aagttcggcgtgccgccggagaaggtcgtcgaggtgcaggcgctcgccggcgattccacc
gacaacgtgcccggcgtgcccggcatcggcatcaagaccgcggcgcagctgatcgtcgaa
tatggcgacctcgaacaattgctgttccgtgccggcgagatcaagcagccgaagcggcgc
gaggcgctgctcgagaacgccgagaaggcgcggatttcgcgcaagctcgtgctgcttgac
gacaaggtgaagctggacgtgccgctggacgatctcgccgtccacgagcccgatgcgcgc
aagctgatcgccttcctgaaggcgatggaattcaccacgctgacgcgtcgcgtcgcggac
tattcgcagatcgatcccgccaacgtcgatgccgatgccagcaacagcagcggcgccagg
gccggcgacggcgcagcaagagcaagatcgtccgacgcgtccggcgatctcttcgccgct
cctgcggccaccgcgacgggcggcgacaagggcgacaagggtgcgagcctcaagggcgcg
ccgatctcgctggctgctgcgcgcgaggaggcgctgcgcaagcttccggtcgagcgcggc
aagtaccaggcgatcaaatcgctgaaggagctcaacgccttcatcgcgcgcatccatgac
accggtcatgtcgcgatcgagatccgcgccaactccatcgacccgatgcaggccgatctc
tgcggcatcgcgctggcgctggcgccgaacgaggcctgctacgtgccgctggcgcacaag
caatccggcggcggcgccggcctgttcgacgcgggccttgcgccggatcaggtcaagcat
gacgacgcgatcgaggcgttgcggccggtgctggaatcaccaggcatcctcaagatcggt
ttcgacgtcaagttcacggccgtgatgctggcgcagcacggcatcaccttgcgcaacagc
gacgatgcgcagctcatctcctacgtgctcgacgccggccgcggctcgcacgggctggaa
tcgctgtccgagcgctggttcagccatgccatgctgaaggagggcgagctgctcggcagc
ggcaagggcaagatcaccttcgatcaggtgccgatcgacaaggcggcgccgctgtcggcg
gaaggcgccgacatgaccttgcgcgtctggcgcgtgctgaagccgcgcctcgtcgccgag
cacatgacgacggtctacgaaacgctggaacggccgctggtgtcggtgctcgcgcgcatg
gagcggcgcggcatctcgatcgaccgccaggtgctgtcgcggctatcaggcgacttcgcc
cagaccgcggcccgcgtcgaggccgagatccaggagatcgcgggcgagccggtcaacgtc
ggcagccccaagcagatcggcgacatcctgttcggcaagatgggactgccgggcggcacc
aagaccaagaccggcgcgtggtccaccaccgcgcaggtgctcgacgaactcgccgagcag
ggccacgatttcccacggaagattctggagtggcgccaggtctcgaaactgaaatcgacc
tacaccgacgcgctgccgacctacgtcaatccgcagacccatcgcgtccacaccacctac
gcgctggccgcgaccacgacgggccggctgtcgtcgaacgagccgaaccttcagaacatt
ccggtccgcaccgaggatggccgcaagatccgccgcgccttcatcgcgatatcagggcac
aagctggtctccgccgactattcgcagatcgagctgcgcctgctcgccgagatcgccgac
atccccgtgctgaagcaggcgttccgcgacgggctcgacattcacgccatgacggcctcg
gaaatgttcggggtgccgatcaagggtatgccgagcgagatccgccgccgcgccaaggcg
atcaatttcggcatcatctacggcatctcggcgttcggcctcgccaaccagctcggcatc
gcgcgcgaggaagcctcggcctacatcaagaagtactttgagcgctttcccggcatccgc
gcctatatggacgagacgcgcgatttctgccggcagaacggctacgtcaccacgctgttc
ggccggaagatgtattatcccgacatcaaggcgtccaacgcctcggtgcgcgcgttcaac
gagcgcgccgcgatcaacgcgcggctgcagggtaccgccgccgacatcatccgccgcgcc
atgacgcgggtggagggcgcactcgccgagaagaagctctcggcgcagatgctgctccag
gtgcatgacgaactgatcttcgaggtgccggacgccgaggtcgaggcgacgctcccggtc
gtgcagcacgtgatgcaggacgcaccgttcccggccgtgctgctctcggtgccgctgcat
gtcgatgcgcgcgcggcgaacaattgggacgaggcacactga
DBGET
integrated database retrieval system
