Bipolaris zeicola: COCCADRAFT_1759
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Entry
COCCADRAFT_1759 CDS
T03110
Name
(RefSeq) hypothetical protein
KO
K03002
DNA-directed RNA polymerase I subunit RPA2 [EC:
2.7.7.6
]
Organism
bze
Bipolaris zeicola
Pathway
bze03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
bze00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
COCCADRAFT_1759
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
bze03021
]
COCCADRAFT_1759
Enzymes [BR:
bze01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
COCCADRAFT_1759
Transcription machinery [BR:
bze03021
]
Eukaryotic type
RNA polymerase I system
RNA polymerase I
Core subunits
COCCADRAFT_1759
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNA_pol_Rpb2_6
RNA_pol_Rpb2_1
RNA_pol_Rpa2_4
RNA_pol_Rpb2_3
RNA_pol_Rpb2_2
RNA_pol_Rpb2_7
Rpr2
Motif
Other DBs
NCBI-GeneID:
19144865
NCBI-ProteinID:
XP_007708328
JGI:
1759
UniProt:
W6YI32
LinkDB
All DBs
Position
Unknown
AA seq
1201 aa
AA seq
DB search
MAPAASATSKPQPQWSTKFDTLRRHDLFRNPPKDKTAYPTLAAAVDPHINSFNAIFAPGG
QLAEGIRDIGTKVFLDGNPYATPEETGPRNRLHLRIQDVFLDKPVLPPTNKVALKNRNIL
PAETRERHATYRGKMRARLEWRVNNGDWQEEVVDLGSIPIMLKSNRCHLEGLPPAALVKA
KEESDELGGYFIINGNEKIIRMLQVNHRNYPMAIKRGAFTNRGPGYTQFGIQLRSMRPDQ
TSQTNALHYLSDGNVNFRFSWRKAEYLVPICMILKALVETNDREIFEGLVGAAGSEGLEQ
KQFVTDRVELLLRTYKVYGLHSKSKTRAYLGEKFKVVMQLPADVTDEEAGTEFLRKIVLP
HLGCVNVTPAQDADKFRMILFMTRKLYALVEGDCAVDNPDAVQNQEILLGGQLYGMILKE
RLEEWLNSFQIVLREWGRRTEYRPFTSQEFHKDWSSKILRRTQLAIGQAMEYFLSTGNLV
SPTGLDLQQTSGFISHFRMVHRGAFFATLKTTTVRKLLPESWGFMCPVHTPDGSPCGLLN
HFSHTCKIATTNLDVSAVPKLVAELGVSSKSSASLDASVVVQLDGRVLGFCSPKQAKIIS
DTLRYWKVEGSHGVPVEMEIGYIPNSNNGQYPGVYMFSQCSRMYRPVKYLPLNKLDYVGP
FEQPYMSISVTDAEIVSGDSTHVEFEPTNIFSIIANQTPFSDFNQSPRNMYQCQMGKQSM
GTPGTAMRYRTDNKTYRLQTGQTPIARPPLYNEYGMDNFPNGMNAVVAVISYTGYDMDDA
MILNKSSHERGFGHGTVYKTKILNLEEGNRKSRSNKSIAKLFGFAPEGLIKAESKETLDI
DGLPRIGTMLRSGDPIAAFHTVSYDAATGDYVNRDGQTQFLKYKEDEIAFVEEVRVIGSE
DGTQPCQKVSVKLRTPRSPVVGDKFSSRHGQKGVVSQKFPTTDMPFSESGIQPDVIINPH
AFPSRMTIGMFIESLAGKSGALHGMAQDSTPFKFDEQNTAVDYFGAQLKAAGYNYYGNEP
MYSGITGEELYADIYIGVVFYQRLRHMVNDKFQVRSNGPSNALTGQPIKGRKKGGGIRVG
EMERDALLAHGTAFLLQDRLMNCSDYTKAAVCRTCGSFLSTTPTVSEYGRKKDRNGKDVT
IRCRRCAKLADSNDNDVWMDAQGLRYSGGEDVAIVAVPGVLKYLDVELSSMGIRLKYNVD
P
NT seq
3606 nt
NT seq
+upstream
nt +downstream
nt
atggcgcctgccgcaagcgcaacgagcaagccacagccgcagtggtcgacaaaattcgac
actctcaggcgacacgatctgttccgcaacccgcccaaggacaagacagcctacccgacc
ctcgcagccgccgtcgatccccacatcaattcgttcaacgccatctttgctccaggcgga
cagctggccgagggcatacgggatattggcaccaaggttttccttgacggcaacccatat
gccacccctgaagagacaggcccccgcaacaggctgcacctgcgcatacaagatgtcttc
ctcgacaagcctgtcctgccgcccaccaacaaggtcgccctcaagaatcgcaacattctt
cccgcagagactcgcgaacgacacgccacataccgcggcaagatgcgcgcgcgattagag
tggagggtcaacaatggcgattggcaggaagaggttgtcgatctgggctcaatccccatt
atgctcaagtccaatcgctgccatctcgagggcctcccaccagcggctctcgtcaaggcc
aaagaggagagcgacgagcttggtggctacttcatcatcaacggaaatgaaaaaatcatc
cgtatgctccaggtcaaccaccgaaattaccccatggccattaagcgtggcgccttcacc
aatcgcggtcctggttacacccagtttggtatccaactccgatcgatgcgacccgatcaa
acatcacaaacaaacgctctacattatcttagtgacggcaacgtcaacttccgcttctca
tggcgcaaggctgaatacctcgtcccaatctgcatgatcctcaaagccttggtcgaaacg
aacgatcgagaaatattcgaaggcctcgtaggcgcagcgggctctgaaggtctcgaacaa
aagcagtttgtaacggacagagtagaactgctgctccggacatacaaggtctatggccta
cactccaagtcaaagactcgcgcatatctgggagaaaagttcaaggtcgttatgcaactg
ccagcagacgtcacggacgaggaagccggcactgagttccttcggaaaatcgtccttccc
cacctgggctgtgtaaacgtaactcctgctcaagatgcggacaaattccgtatgattctc
ttcatgaccagaaagctctatgctttggtcgagggtgactgcgccgttgacaacccagac
gctgtccagaatcaggaaatcctactaggtggacaattgtacggcatgatcctgaaggag
aggctagaagaatggctcaacagcttccagattgttttgagagaatggggcaggaggaca
gagtaccggccttttacatcacaagaattccacaaggattggtcttccaagatattgcga
cggacacaactggctatcggtcaggctatggaatactttctcagtaccggtaacctcgtt
tcgccgactgggctcgatctacaacagacttccggatttatctcccatttcagaatggtg
cacagaggtgcctttttcgcgacactcaaaacaacaacggttcggaaactccttcctgaa
tcttggggcttcatgtgccccgtccatacccctgatggttctccttgtggacttctcaac
cacttttcgcacacgtgcaagattgcgacaaccaatctagacgtttcagcagtccccaaa
cttgttgcggagctaggtgtatcgagcaaatcgtccgcttctcttgatgcaagtgtggtg
gtacagctggacggtcgggtgctgggcttctgttcgccaaaacaagccaaaattatcagc
gatacgctacgttactggaaggttgaaggttcgcacggtgtgccggtcgagatggagatt
ggttacattccaaactcaaacaacggtcaatatccgggagtctacatgttctcgcagtgc
tcgagaatgtaccgacctgtcaagtacctgcctctcaacaaactggattatgttggtccg
tttgagcagccctacatgtccatctctgttacggacgccgagattgtatcgggagactca
actcacgttgaatttgagccgaccaacatcttctccatcatcgccaaccagactccgttc
tccgatttcaaccaatcaccaagaaacatgtaccaatgtcagatgggaaagcaatcgatg
ggtacaccaggaactgccatgagataccgaacagacaacaaaacctaccgcttacaaact
ggtcagactcctattgccagacctccattgtataatgagtatggaatggacaacttcccc
aacggaatgaacgccgttgtggccgttatttcttatactggttacgacatggacgatgct
atgattctgaacaagtcatcacacgagcgcgggtttgggcacggtactgtctacaagacc
aagattttaaatctcgaggaaggaaaccgcaagagtcgatcgaataagtcgatagccaag
ctttttggctttgcgcctgagggtctcatcaaagcagagtctaaggagactcttgatatt
gacggcttacctcgtatcgggaccatgttgcggtctggcgatcccatcgcagctttccac
actgtctcatatgatgcagctactggcgactacgtgaaccgtgatggacagactcagttc
ctcaagtacaaggaggacgaaatcgctttcgttgaggaagtccgcgtcattggctcagaa
gacggtacccagccttgccaaaaggtctcagtcaagctgcgaacgccgcgttctcccgtt
gtcggagacaagttctcttctcgtcacggtcagaagggtgtcgtgtctcagaagttccca
accactgacatgccgttttccgaatccggcatacaaccagatgttatcatcaacccccac
gctttcccgtcccgtatgacaatcggcatgtttatcgaatcactggctggaaaatctgga
gcgctccacggcatggcgcaggattcaacgccgttcaaattcgacgaacagaacacggcc
gtcgattactttggtgcccaattgaaagccgcaggctacaactactatggaaatgaacca
atgtactctggaatcaccggcgaggaactttacgctgatatctatattggagtagtattc
taccaacgtcttcgtcacatggtcaacgacaaattccaagtccgaagcaacggtccgtca
aacgcactaacgggccagcctatcaagggtaggaagaagggtggtggtatccgtgtcgga
gaaatggagcgtgatgctctgttggcccacggcacagccttcctgctccaggatcgactg
atgaactgttccgattacaccaaagccgccgtttgcagaacatgtggctccttcctcagc
accacacctactgtcagcgaatatggacgcaaaaaggacagaaatggcaaggacgttact
attcgttgcagacgttgcgccaagcttgctgatagcaacgataacgacgtttggatggac
gctcagggcttgcgctactccggtggcgaagatgtcgcgatcgtggctgtgcctggtgtc
ctcaagtatcttgacgttgaactgtccagtatgggcatcagactcaagtacaacgtggat
ccttag
DBGET
integrated database retrieval system