Caballeronia sp. SBC2: SBC2_06410
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Entry
SBC2_06410 CDS
T06459
Symbol
rfaF
Name
(GenBank) ADP-heptose--LPS heptosyltransferase 2
KO
K02843
lipopolysaccharide heptosyltransferase II [EC:
2.4.99.24
]
Organism
caba
Caballeronia sp. SBC2
Pathway
caba00540
Lipopolysaccharide biosynthesis
caba01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
caba00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00540 Lipopolysaccharide biosynthesis
SBC2_06410 (rfaF)
09180 Brite Hierarchies
09181 Protein families: metabolism
01005 Lipopolysaccharide biosynthesis proteins [BR:
caba01005
]
SBC2_06410 (rfaF)
Enzymes [BR:
caba01000
]
2. Transferases
2.4 Glycosyltransferases
2.4.99 Transferring other glycosyl groups
2.4.99.24 lipopolysaccharide heptosyltransferase II
SBC2_06410 (rfaF)
Lipopolysaccharide biosynthesis proteins [BR:
caba01005
]
Core region
SBC2_06410 (rfaF)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Glyco_transf_9
PS_pyruv_trans
Motif
Other DBs
NCBI-ProteinID:
QIE22630
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All DBs
Position
complement(719678..720727)
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AA seq
349 aa
AA seq
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MRRALVIAPNWIGDALMAQPLFSLLKKLHPRIVIDAVAPAWVAPVLERMPEIHDVYATDL
AHGKLQMLRRWQLASDLRDVGYDAAYVLPNSFKSALIPWMAGINLRVGYTGESRYGLLNV
RHANPAKGQRPPMVGQYAALAYAPGAKLPWLQENATVPMPVPRLDTDLNEAARVSARFNL
DTRAPLVVFCPGAEYGPAKRWPPEHFAALAQFIAQSFPYARIVALGSPKDSPIAQAIADR
APNVRNLCGQTSLGEACALISRASAVVTNDSGLMHVAAALRRPLVAVFGSTDPRHTPPLS
DLAKVQWLHLECSPCFARECPLGHLNCLRELGAEQVFGDLRGMLMTQRH
NT seq
1050 nt
NT seq
+upstream
nt +downstream
nt
atgcgtcgcgcgttggttatcgcaccgaactggattggtgacgcattgatggcgcagccg
ctgttttcgctgctgaagaagctgcatccgcggattgttatcgatgctgtcgcacccgcc
tgggtcgcgcccgtgctggaacgcatgcccgagatccacgacgtctacgccacggatctc
gcccacggcaagctgcaaatgctgcgtcgatggcaactcgcgagcgatttgcgcgacgtg
ggttacgacgccgcgtacgtgctgccgaactctttcaaatcggcgctgattccctggatg
gcggggatcaacctgcgcgtcggctatacgggcgaaagccgttatggcctgctcaacgtg
cggcacgcgaatccggccaagggtcaacgcccgcccatggtgggccagtacgccgccctc
gcttatgcgccgggcgcgaagctgccgtggctgcaggaaaacgctacagttcccatgccg
gtaccgcggctcgataccgacctgaacgaagcggcacgcgtctccgcgcgctttaatctg
gatacgcgcgcgccgctcgtcgtgttttgcccgggcgcggaatacggtccggcaaagcgc
tggccgccggagcatttcgcggcgctcgcgcagttcatcgcgcagtcgttcccgtatgca
cggattgtcgcgctcgggtcgccgaaagattcgcccatcgcccaagccattgccgatcgc
gcgccgaacgtgcgtaacctgtgcgggcagacgtcactgggcgaagcctgcgcgctgatc
tcgcgtgcgagcgccgtggtcacgaacgattccggcctgatgcacgttgccgccgcgctg
cgccgcccgctggtggccgtgttcggctcgaccgacccgcgccacacaccgcccctctcc
gatctcgcaaaggtacaatggctgcacctcgaatgcagtccgtgctttgcccgcgaatgt
ccgctgggtcatttgaactgtttgcgtgaactcggcgccgagcaggttttcggcgattta
cgcggcatgttgatgacgcagcgtcattaa
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