Caballeronia sp. SBC2: SBC2_20670
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Entry
SBC2_20670 CDS
T06459
Symbol
rimO
Name
(GenBank) Ribosomal protein S12 methylthiotransferase RimO
KO
K14441
ribosomal protein S12 methylthiotransferase [EC:
2.8.4.4
]
Organism
caba
Caballeronia sp. SBC2
Brite
KEGG Orthology (KO) [BR:
caba00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
caba03009
]
SBC2_20670 (rimO)
Enzymes [BR:
caba01000
]
2. Transferases
2.8 Transferring sulfur-containing groups
2.8.4 Transferring alkylthio groups
2.8.4.4 [ribosomal protein uS12] (aspartate89-C3)-methylthiotransferase
SBC2_20670 (rimO)
Ribosome biogenesis [BR:
caba03009
]
Prokaryotic type
ribosomal protein modification factors
SBC2_20670 (rimO)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Radical_SAM
TRAM_2
UPF0004
TRAM
Methyltransf_2
CLP1_P
Motif
Other DBs
NCBI-ProteinID:
QIE24038
LinkDB
All DBs
Position
complement(2283505..2284896)
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AA seq
463 aa
AA seq
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MSQTISPAVPTPSAPKVGFVSLGCPKALVDSEQIITQLRAEGYEISGSYDGADLVVVNTC
GFIDEAVQESLDAIGEALHENGKVIVTGCLGAKKSASGTGLIQEVHPKVLAVTGPHATAE
VMSHVHLHLPKPHDPFIDLVPPAGIKLTPRHYAYLKISEGCNHRCTFCIIPSMRGDLVSR
PLADVMLEAENLFKSGVKELLVISQDTSAYGVDVKYRTGFWNGKPVKTRMTDLVGALGEL
AAQYGAWVRLHYVYPYPSVDEVIPMMAEGPLKGHVLPYLDVPFQHAHPEVLKRMKRPANA
EKVLERVQKWRAMCPDLTIRSTFIAGFPGETEEQFQTLLDFIRIADLDRVGCFAYSPVEG
ATANELDGALPDEVREDRRARFMELAEELSAERMKRKVGKTLKVLVDELSNEGGVGRTAA
DAPEIDGVVYIEPAKKASKRYKAGDFVSVKITGADGHDLWGEV
NT seq
1392 nt
NT seq
+upstream
nt +downstream
nt
atgtcgcagaccatttcccccgccgtgccgaccccatcggcccctaaagtcgggttcgtt
tcactcgggtgcccaaaagccttggtggactccgagcaaatcatcacgcaactgcgcgcg
gaagggtacgagatttctggctcctacgacggcgctgatctcgtcgtggtcaacacctgc
ggattcatcgatgaagccgtgcaggaaagcctcgacgccattggcgaggcgctgcacgag
aacggcaaggtgatcgtcaccggttgtctcggtgcaaagaaaagcgcgagcgggaccggt
ttgatccaggaagtgcatccgaaagtgctggccgtgaccggtccgcacgcgaccgccgaa
gtcatgagtcacgtgcatctgcatttgcccaagccgcatgatccgttcatcgatctcgtg
ccgcctgccggcatcaagctgacgccgcggcattacgcgtatctgaagatatcggaaggt
tgtaaccaccgctgcacgttctgcatcatcccgtccatgcgtggcgatctggtgtcgcgc
ccgctggccgacgtaatgctcgaagccgagaacctgttcaaatccggggtcaaggagctg
ctcgtgatctcgcaggacacgagcgcgtatggcgtcgatgtcaaatatcgcaccggtttc
tggaacggcaagccggtgaagacgcgcatgacggatctcgtcggcgcgttgggcgaactc
gccgcgcaatatggcgcgtgggtccgcctgcactatgtgtacccctacccgagcgtcgac
gaagtcattccgatgatggccgaaggaccgttgaagggtcatgtgttgccgtatctggat
gtcccgttccagcacgcgcaccccgaagtgctcaagcgtatgaagcgcccggcgaacgcc
gagaaggtgctggaacgcgtgcagaaatggcgggcaatgtgcccggacctgacgatccgg
agtacgtttatcgccggatttccgggtgaaacggaagaacaattccagacgctactggac
ttcattcgtattgccgatctggatcgggtcggatgtttcgcttattcgccagtcgaaggc
gcgacggcgaacgaactcgacggcgcgctgccggatgaagtgcgtgaggaccgtcgcgcg
cgttttatggaactggccgaagaattgtcggcggaacgcatgaaacgcaaggttggcaag
acgctgaaagtgcttgtcgatgaactgagcaacgaaggcggcgtcggccggaccgcggcg
gatgcaccggaaattgacggtgtggtgtatatcgagccggcaaagaaggcgtcgaagcgc
tataaggcgggcgatttcgtgtcggtgaaaatcaccggcgccgatggccacgacttgtgg
ggcgaagtctga
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