Caballeronia sp. SBC2: SBC2_35370
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Entry
SBC2_35370 CDS
T06459
Symbol
gcvP
Name
(GenBank) Glycine dehydrogenase
KO
K00281
glycine cleavage system P protein (glycine dehydrogenase) [EC:
1.4.4.2
]
Organism
caba
Caballeronia sp. SBC2
Pathway
caba00260
Glycine, serine and threonine metabolism
caba00630
Glyoxylate and dicarboxylate metabolism
caba00785
Lipoic acid metabolism
caba01100
Metabolic pathways
caba01110
Biosynthesis of secondary metabolites
caba01200
Carbon metabolism
Module
caba_M00621
Glycine cleavage system
Brite
KEGG Orthology (KO) [BR:
caba00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00630 Glyoxylate and dicarboxylate metabolism
SBC2_35370 (gcvP)
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
SBC2_35370 (gcvP)
09108 Metabolism of cofactors and vitamins
00785 Lipoic acid metabolism
SBC2_35370 (gcvP)
Enzymes [BR:
caba01000
]
1. Oxidoreductases
1.4 Acting on the CH-NH2 group of donors
1.4.4 With a disulfide as acceptor
1.4.4.2 glycine dehydrogenase (aminomethyl-transferring)
SBC2_35370 (gcvP)
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GFIT
Motif
Pfam:
GDC-P
GcvP2_C
Beta_elim_lyase
Aminotran_1_2
Catalase_C
Motif
Other DBs
NCBI-ProteinID:
QIE25467
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Position
3885689..3888616
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AA seq
975 aa
AA seq
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MKLEHPDRLMNRSSLSLAALECHDAFAQRHIGPDAADQHAMLETLGFASRAAFIDAVIPE
SIRRHETLPLGAFTQPKSEAEALASLRKLADQNLVFRNYIGQGYYGTHTPAVILRNVLEN
PAWYTAYTPYQPEISQGRLEALLNFQQMVIDLTGLAISNASLLDEATAAAEAMTLLQRAG
KPKSNLFYVADDVLPQTIEVVRTRAKPAGIEVKVGPAADAATANAFGVLLQYPGANGDVH
DYRALTEAVHAAGGFVIAAADLLALTLLTPPGEWGADVAIGNTQRFGVPVGFGGPHAAYM
AVRDDFKRQMPGRLVGVTVDAQGKHALRLALQTREQHIRREKATSNVCTAQALLAIMASM
YAVYHGPQGLKTIALRVNRVASIFAAGVQKLGYTLANKTFFDTVTIVSGTNTTALHQAAS
AVHVNLRHIDATHVGVSVDETTTRDDLLKLFALFAEVAGKTETFDIDALDADAKVSLPKA
LERTSDYLTHPVFNRHHSEHEMLRYLRSLADKDLALDRTMIPLGSCTMKLNATSEMLPVT
WPEFAQIHPFAPGEQTVGYRTMIDQLEQMLVACTGYAAVSLQPNAGSQGEYAGLLIIHAY
HESRGEGHRNICLIPSSAHGTNPASAQMAGMQVVVVACDEQGNVDIADLKAKADKHADKL
AAIMITYPSTHGVFEVNVREICDIVHARGGQVYVDGANMNAMVGLTAPGQFGGDVSHLNL
HKTFCIPHGGGGPGVGPVAVGAHLAKFLPNQHSTGYQRDAAGIGAVSSAPYGSAAILPIS
WMYIAMMGAQGLTNATESAILAANYVAKRLAPHYPVLYSGAGGLVAHECILDLRPLKETS
GISVDDVAKRLIDYGFHAPTMSFPVPGTLMVEPTESESKEELDRFIDAMIAIRDEIRAVE
EGKSDREDNPLKNAPHTAAVVVADGWSHAYSRETAAYPLTSLIARKYWPPVGRADNAYGD
RNLFCSCIPLSEYGE
NT seq
2928 nt
NT seq
+upstream
nt +downstream
nt
atgaagctcgaacacccggaccgtctgatgaaccgctcatccttgtccctcgccgcactc
gaatgccacgatgcgttcgcccaacggcacattggcccggatgcggccgaccagcacgcc
atgctcgaaacgctcggcttcgcgtcgcgtgcggcgttcatcgatgcggtgattcccgag
tccatccgacgccacgaaacgctgccgctcggcgcgttcacgcagccgaaaagcgaggcg
gaagcgctggcatcgctgaggaaactcgcggatcagaacctggtgttcagaaactatatt
gggcagggttattacggcacgcatacgccggccgtgatcctgcgcaacgtgcttgaaaac
ccggcgtggtacacggcttacacgccgtatcagccggagatttcgcagggccgcctggaa
gcgttgctcaactttcagcagatggttattgacctgacgggtctcgcgatttcgaacgca
tcattgctcgatgaagccaccgccgccgccgaagccatgacgctgctgcaacgcgcgggc
aagccgaaatcgaacctgttttatgtcgccgacgacgtgctgccgcagaccatcgaagtc
gtgcgcacgcgtgcaaaaccggcggggatcgaagtaaaagtcggtcctgccgcggatgcc
gccacggcgaacgcgttcggcgtgctcctgcaatacccgggcgcgaatggcgacgtgcat
gactatcgcgcgttgactgaagcggtccatgcggccggtggtttcgtgatcgccgccgcc
gatctgctcgcgctcacgctgctcacgccgccgggcgaatggggcgcggatgtggccatc
ggcaatacgcagcgctttggcgtgccggtcggttttggcggtccgcacgcggcgtacatg
gccgtacgcgatgacttcaaacgtcagatgccgggtcgtctggtcggcgtcactgtggat
gcccaaggcaagcacgcgctgcgtctcgcgctgcaaacccgcgagcaacacatccgccgc
gaaaaggcaacatcgaatgtatgtacggcgcaggcgttgctcgcgatcatggccagcatg
tacgccgtgtatcacgggccgcagggcctgaagaccatcgcgttgcgcgtgaatcgcgtg
gcgtcgatcttcgccgccggcgtgcaaaaactcggctacacgctcgcgaacaaaacgttc
ttcgataccgtcaccatcgtcagcggcacgaataccacggcgctgcatcaggcggcgtcg
gcggtgcacgtgaacctgcgccacattgatgcaacgcacgtaggcgtttccgtcgatgaa
accaccacgcgcgacgacttgctcaagctcttcgcgctgttcgcggaagtggcgggcaag
acggaaacgttcgacatcgacgccctcgatgccgacgcaaaagtctcgttgccgaaagcg
ctggaacgcacaagcgactacctcacgcatccggtgttcaaccgtcaccactccgagcat
gaaatgctgcgctacctgcgcagtctggcggataaggatctggcactcgaccgcacgatg
atcccgctcggttcatgcacgatgaagctgaacgcaacgtcggaaatgctgcccgtgacg
tggcccgaattcgcgcagattcatccgttcgctccgggtgagcaaacggtgggttatcgg
acgatgatcgaccagctcgagcaaatgctcgtagcgtgtaccggttacgcggctgtatcg
ctgcaaccgaatgccggctcgcaaggcgaatacgccggcttgctgatcatccacgcgtat
cacgagtcgcgtggcgaagggcatcggaacatctgcctgattccatcgtcggcgcatggt
acgaacccggcatcggcgcaaatggccggcatgcaggttgtggtcgttgcgtgcgatgaa
cagggcaacgtcgatatcgccgacttgaaggccaaggccgacaagcacgccgacaaactc
gccgcgatcatgatcacgtatccgtccacgcacggcgtgttcgaagtgaacgtgcgcgag
atctgcgacattgtgcatgcccgcggcggacaggtttacgtcgatggcgcgaacatgaac
gcaatggtcggcctcaccgcgccgggtcagttcggcggcgatgtctcgcacctgaacctg
cacaagaccttctgcattccgcatggcggcggcggaccgggcgtaggtccggttgcagtc
ggcgcgcatttggccaagttcctgccgaaccagcattcgaccggttatcagcgcgatgcg
gcggggattggggcggtatcgtcggcgccttatggctcggctgccattctgccaatctcc
tggatgtacatcgcgatgatgggcgcgcaaggtctcacgaacgcgaccgaaagcgcgatc
cttgcggcgaactatgtggcaaagcggctcgcgccgcattaccccgtgctgtacagcggc
gcgggcggtctggtcgcgcacgagtgcattctcgatctgcggccgttgaaagaaaccagc
ggcatttcggttgatgacgtcgccaagcgcctgatcgattacggctttcatgcaccgacc
atgagcttcccggtgccgggcacgctgatggtcgagccgacggaatcggaatcgaaagag
gaactggatcggtttatcgatgcaatgatcgccattcgcgacgaaattcgcgcggtcgaa
gaaggcaaatcggatcgcgaagacaatccgctgaagaacgcgccgcatacggcagcggtt
gtggtcgccgatggctggagccacgcctactcgcgcgaaacggctgcgtatccgctgaca
tcgttgattgcgcgcaaatactggccgccggttggccgcgccgacaacgcttacggcgac
cgtaatctgttctgctcgtgcattccgttgtcggagtacggcgaataa
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