Caballeronia sp. SBC2: SBC2_35950
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Entry
SBC2_35950 CDS
T06459
Symbol
mnmC_2
Name
(GenBank) tRNA 5-methylaminomethyl-2-thiouridine biosynthesis bifunctional protein MnmC
KO
K15461
tRNA 5-methylaminomethyl-2-thiouridine biosynthesis bifunctional protein [EC:
2.1.1.61
1.5.-.-]
Organism
caba
Caballeronia sp. SBC2
Brite
KEGG Orthology (KO) [BR:
caba00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
caba03016
]
SBC2_35950 (mnmC_2)
Enzymes [BR:
caba01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.61 tRNA 5-(aminomethyl)-2-thiouridylate-methyltransferase
SBC2_35950 (mnmC_2)
Transfer RNA biogenesis [BR:
caba03016
]
Prokaryotic type
tRNA modification factors
Other tRNA modification factors
SBC2_35950 (mnmC_2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DAO
NAD_binding_8
Methyltransf_30
Pyr_redox_2
FAD_binding_3
GIDA
FAD_binding_2
Lycopene_cycl
Pyr_redox
3HCDH_N
HI0933_like
TrkA_N
Motif
Other DBs
NCBI-ProteinID:
QIE25525
LinkDB
All DBs
Position
complement(3954252..3956120)
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AA seq
622 aa
AA seq
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MTHSFFCANVLVDRERWFQRRNFTVLQAEFDAARLFIETWATWRADPQRCERLHFVAVAP
LASMAHPDMLTDQPSLSQLVIDAWPMQVAGLHRLEFENGRVVLTLAIGELEIMLQKVWLR
ADAFYLRLSQVDAKLAYIAKALARVAGDQATLCAQAQPLLPQALRDAGFICDETPDGTHV
KARFAPRWRVRRHEPPLALAIENATPSAEFSKSAVPASSRQMPRHAIVIGAGLAGCAITE
RLASRGWRVSLIERHNDLAHDASGNPAGVFHPIVWRDDSIAARLTRAGFLYALHRWSELE
RAGHTLNRSHEGLLQIADSTDDAHAIASAIKRFGLPPSYVIAVDEHEATRLAGQPVARPG
WFFPHGGWISPAAICAAQCKAAGDLLTPRFGTEVARIDRKNDTWTAFDTTGRAVAHAPVV
ILANAGDAQRLAGLHGLPTRGVRGQLTLLDSSPLDGLRVPIVGDGYAVPLGAHRTLTGAT
YDIDDINTQIQAAGHIENLERVAMMLPALAGFVPQAETLEGRVAFRSVTSDRMPMIGALA
DESAARANATRLSGAWPLDLPRTAGLYGAFAFGSRGLVWSTLAAELIAAQIEGEPWPIER
ELAEAIDPGRFLLRALRQGELG
NT seq
1869 nt
NT seq
+upstream
nt +downstream
nt
atgacccattcctttttttgcgcaaacgtgcttgtcgatcgcgaacgctggttccagcga
cggaatttcacggttttgcaggcggaattcgacgctgcgcggctgtttatcgagacatgg
gccacttggcgcgcagatccacagcgctgcgagcgcctgcatttcgtggcggtcgccccg
ctggcgtcgatggctcatccggacatgctcaccgaccagccatcgctttcccaattagtg
atcgatgcatggccaatgcaggttgccggactgcacaggctcgagtttgaaaacgggcgg
gtggtgctgacgctggccatcggcgagctggagataatgctgcagaaggtctggctacgt
gccgatgccttttatctgcggctatcgcaggttgatgcgaagttggcgtacatcgccaaa
gcgctggctcgtgtcgccggggatcaggcgacgttatgcgcgcaagcgcagccccttctt
ccccaagcgctcagagacgcaggttttatctgcgatgaaaccccggacggcactcatgtg
aaagcgcgtttcgccccacgctggcgtgtacggcgtcacgaaccgccgcttgcattggca
attgagaacgcgactccatcggcagagttttcgaagagcgcggtaccagcttcctcacgt
caaatgccacgccatgcaatcgtgatcggggctggccttgcaggctgcgcgatcaccgag
cgccttgcgtcgcggggatggcgagtcagcctgatcgagcgtcacaacgatctcgcccac
gatgcgtcgggtaaccccgctggggtctttcacccgatcgtctggcgtgacgacagcatt
gccgcccgcctgacacgcgcaggatttctctacgcgctgcaccgttggtccgaactcgag
cgcgccggccacaccttgaaccgcagccacgagggattgctgcaaatcgcagattccacc
gacgatgcgcacgcaattgcatctgcgatcaagcgcttcggcttaccgccgtcctatgta
atagctgtcgatgaacacgaagccacccgtctggccggccagcctgtcgcgcgtcccggc
tggtttttccctcacggcggctggatttcccccgccgcgatatgcgccgcgcaatgcaag
gctgcgggagatttgctcaccccccgcttcggcacggaagtcgcgcgtatagatcggaaa
aacgacacatggactgccttcgacaccactggccgcgccgtcgcccacgcccccgtcgtg
atcctcgccaacgccggcgatgcgcaacgcctcgcgggactccatggcctgccgacgcgc
ggcgtacgcggccagctaacgctactggactcgagtccgctcgatggtctgcgtgttccc
atcgtcggcgatggctacgccgtgccgctcggcgcgcatcggacgctgacgggcgcgacc
tacgatattgacgacatcaacacgcagatccaggccgccggtcatatcgagaatcttgaa
cgtgtcgcgatgatgctgcccgccctggcggggttcgtgcctcaagcggaaacgctggaa
ggccgcgtagctttccgatcggtgacgagcgaccgcatgccgatgatcggcgccctcgcc
gacgaatccgccgcacgtgccaatgcgacccgtctttccggcgcatggccgctcgatttg
ccgcgcacggccggcttgtacggcgcgtttgctttcggttcgcgcggactggtgtggtcg
acgctggccgccgagctgatcgcggcgcaaatcgaaggggaaccgtggccgatcgaacgt
gagctggctgaagctatcgatccaggacgcttccttctacgggcattacgacaaggcgaa
ctcggctaa
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